RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
VCAN-207ENST00000507162 SBNO1A3KN83 1393 aa11.11□□□□□ -0.63
VCAN-207ENST00000507162 CAPN15O75808 1086 aa11.1□□□□□ -0.63
VCAN-207ENST00000507162 EVA1CP58658 441 aa11.1□□□□□ -0.63
VCAN-207ENST00000507162 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
VCAN-207ENST00000507162 IQGAP3Q86VI3 1631 aa11.09□□□□□ -0.63
VCAN-207ENST00000507162 CHD4Q14839 1912 aa11.09□□□□□ -0.63
VCAN-207ENST00000507162 CDC42BPGQ6DT37 1551 aa11.09□□□□□ -0.63
VCAN-207ENST00000507162 CHRNA2Q15822 529 aa11.09□□□□□ -0.63
VCAN-207ENST00000507162 NEXMIFQ5QGS0 1516 aa11.09□□□□□ -0.63
VCAN-207ENST00000507162 PLEKHH1Q9ULM0 1364 aa11.08□□□□□ -0.64
VCAN-207ENST00000507162 TMEM132EQ6IEE7 984 aa11.08□□□□□ -0.64
VCAN-207ENST00000507162 NRKQ7Z2Y5 1582 aa11.07□□□□□ -0.64
VCAN-207ENST00000507162 NUP188Q5SRE5 1749 aa11.07□□□□□ -0.64
VCAN-207ENST00000507162 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
VCAN-207ENST00000507162 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
VCAN-207ENST00000507162 ITGAEP38570 1179 aa11.06□□□□□ -0.64
VCAN-207ENST00000507162 ARXQ96QS3 562 aa11.06□□□□□ -0.64
VCAN-207ENST00000507162 STK32BQ9NY57 414 aa11.06□□□□□ -0.64
VCAN-207ENST00000507162 RPGRIP1LQ68CZ1 1315 aa11.06□□□□□ -0.64
VCAN-207ENST00000507162 RREB1Q92766 1687 aa11.05□□□□□ -0.64
VCAN-207ENST00000507162 PLSCR1O15162 318 aa11.05□□□□□ -0.64
VCAN-207ENST00000507162 HSPA6P17066 643 aa11.05□□□□□ -0.64
VCAN-207ENST00000507162 ZC3H6P61129 1189 aaKnown RBP11.05□□□□□ -0.64
VCAN-207ENST00000507162 SAFB2Q14151 953 aaKnown RBP eCLIP11.05□□□□□ -0.64
VCAN-207ENST00000507162 BARGINQ6ZT62 677 aa11.05□□□□□ -0.64
VCAN-207ENST00000507162 THSD7AQ9UPZ6 1657 aa11.04□□□□□ -0.64
VCAN-207ENST00000507162 NRAPQ86VF7 1730 aa11.04□□□□□ -0.64
VCAN-207ENST00000507162 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
VCAN-207ENST00000507162 MTFR1LQ9H019 292 aa11.04□□□□□ -0.64
VCAN-207ENST00000507162 RRBP1Q9P2E9 1410 aaKnown RBP11.03□□□□□ -0.64
VCAN-207ENST00000507162 LOC105371045A0A1W2PR82 267 aa11.03□□□□□ -0.64
VCAN-207ENST00000507162 PROM2Q8N271 834 aa11.03□□□□□ -0.64
VCAN-207ENST00000507162 TCP11L2Q8N4U5 519 aa11.03□□□□□ -0.64
VCAN-207ENST00000507162 ADGRF5Q8IZF2 1346 aa11.03□□□□□ -0.64
VCAN-207ENST00000507162 TECPR2O15040 1411 aa11.02□□□□□ -0.64
VCAN-207ENST00000507162 KIF1AQ12756 1690 aa11.02□□□□□ -0.64
VCAN-207ENST00000507162 SLC15A2Q16348 729 aa11.02□□□□□ -0.65
VCAN-207ENST00000507162 LARP1Q6PKG0 1096 aaKnown RBP11.02□□□□□ -0.65
VCAN-207ENST00000507162 PTF1AQ7RTS3 328 aa11.02□□□□□ -0.65
VCAN-207ENST00000507162 COL14A1Q05707 1796 aaKnown RBP11.02□□□□□ -0.65
VCAN-207ENST00000507162 GPRASP1Q5JY77 1395 aa11.02□□□□□ -0.65
VCAN-207ENST00000507162 MYOM1P52179 1685 aa11.01□□□□□ -0.65
VCAN-207ENST00000507162 C11orf95C9JLR9 678 aaPredicted RBP11.01□□□□□ -0.65
VCAN-207ENST00000507162 SGIP1Q9BQI5 828 aa11.01□□□□□ -0.65
VCAN-207ENST00000507162 KIAA0232Q92628 1395 aa11.01□□□□□ -0.65
VCAN-207ENST00000507162 ABCC11Q96J66 1382 aa11.01□□□□□ -0.65
VCAN-207ENST00000507162 NRXN1Q9ULB1 1477 aa11□□□□□ -0.65
VCAN-207ENST00000507162 RGL3Q3MIN7 710 aa11□□□□□ -0.65
VCAN-207ENST00000507162 NUTM2GQ5VZR2 741 aa11□□□□□ -0.65
VCAN-207ENST00000507162 GPBP1L1Q9HC44 474 aaPredicted RBP11□□□□□ -0.65
VCAN-207ENST00000507162 CLTCL1P53675 1640 aa10.99□□□□□ -0.65
VCAN-207ENST00000507162 GOLGB1Q14789 3259 aaKnown RBP10.99□□□□□ -0.65
VCAN-207ENST00000507162 TXNRD1Q16881 649 aa10.99□□□□□ -0.65
VCAN-207ENST00000507162 NGDNQ8NEJ9 315 aaKnown RBP10.99□□□□□ -0.65
VCAN-207ENST00000507162 ZNF526Q8TF50 670 aaPredicted RBP10.99□□□□□ -0.65
VCAN-207ENST00000507162 DLC1Q96QB1 1528 aa10.99□□□□□ -0.65
VCAN-207ENST00000507162 ABCA3Q99758 1704 aa10.98□□□□□ -0.65
VCAN-207ENST00000507162 RGPD8O14715 1765 aaPredicted RBP10.98□□□□□ -0.65
VCAN-207ENST00000507162 FMN2Q9NZ56 1722 aa10.98□□□□□ -0.65
VCAN-207ENST00000507162 COL13A1Q5TAT6 717 aaPredicted RBP10.97□□□□□ -0.65
VCAN-207ENST00000507162 POGKQ9P215 609 aa10.97□□□□□ -0.65
VCAN-207ENST00000507162 ACIN1Q9UKV3 1341 aaKnown RBP10.97□□□□□ -0.65
VCAN-207ENST00000507162 ROCK1Q13464 1354 aa10.97□□□□□ -0.65
VCAN-207ENST00000507162 KIF1BO60333 1816 aa10.97□□□□□ -0.65
VCAN-207ENST00000507162 CASZ1Q86V15 1759 aa10.96□□□□□ -0.65
VCAN-207ENST00000507162 SIRT1Q96EB6 747 aa10.96□□□□□ -0.65
VCAN-207ENST00000507162 PRAM1Q96QH2 718 aa10.96□□□□□ -0.65
VCAN-207ENST00000507162 THRAP3Q9Y2W1 955 aaKnown RBP10.96□□□□□ -0.65
VCAN-207ENST00000507162 GRIN3BO60391 1043 aa10.95□□□□□ -0.66
VCAN-207ENST00000507162 DDB1Q16531 1140 aa10.95□□□□□ -0.66
VCAN-207ENST00000507162 HIRIP3Q9BW71 556 aaPredicted RBP10.95□□□□□ -0.66
VCAN-207ENST00000507162 SSH2Q76I76 1423 aa10.94□□□□□ -0.66
VCAN-207ENST00000507162 ATP10DQ9P241 1426 aa10.94□□□□□ -0.66
VCAN-207ENST00000507162 ZBTB7CA1YPR0 619 aa10.94□□□□□ -0.66
VCAN-207ENST00000507162 POLD1P28340 1107 aa10.94□□□□□ -0.66
VCAN-207ENST00000507162 PRELPP51888 382 aa10.94□□□□□ -0.66
VCAN-207ENST00000507162 TNS4Q8IZW8 715 aa10.94□□□□□ -0.66
VCAN-207ENST00000507162 NLGN2Q8NFZ4 835 aa10.94□□□□□ -0.66
VCAN-207ENST00000507162 OVOS2A0A0G2JMS6 1433 aa10.93□□□□□ -0.66
VCAN-207ENST00000507162 OVOS2A0A0J9YW53 1432 aa10.93□□□□□ -0.66
VCAN-207ENST00000507162 OVOS2Q6IE36 1432 aa10.93□□□□□ -0.66
VCAN-207ENST00000507162 YTHDC2Q9H6S0 1430 aaKnown RBP10.93□□□□□ -0.66
VCAN-207ENST00000507162 MAP3K5Q99683 1374 aa10.93□□□□□ -0.66
VCAN-207ENST00000507162 YBX3P16989 372 aaKnown RBP eCLIP10.93□□□□□ -0.66
VCAN-207ENST00000507162 APLP1P51693 650 aa10.92□□□□□ -0.66
VCAN-207ENST00000507162 SHANK3Q9BYB0 1731 aa10.92□□□□□ -0.66
VCAN-207ENST00000507162 DNAJC5GQ8N7S2 189 aa10.91□□□□□ -0.66
VCAN-207ENST00000507162 MARCH10Q8NA82 808 aaPredicted RBP10.91□□□□□ -0.66
VCAN-207ENST00000507162 MINK1Q8N4C8 1332 aaPredicted RBP10.9□□□□□ -0.66
VCAN-207ENST00000507162 DHX57Q6P158 1386 aaKnown RBP10.9□□□□□ -0.67
VCAN-207ENST00000507162 PRR36Q9H6K5 1346 aa10.89□□□□□ -0.67
VCAN-207ENST00000507162 CFAP70Q5T0N1 1121 aa10.89□□□□□ -0.67
VCAN-207ENST00000507162 RNF216Q9NWF9 866 aaPredicted RBP10.89□□□□□ -0.67
VCAN-207ENST00000507162 ANKARQ7Z5J8 1434 aa10.89□□□□□ -0.67
VCAN-207ENST00000507162 SLC34A2O95436 690 aa10.88□□□□□ -0.67
VCAN-207ENST00000507162 TOM1L2Q6ZVM7 507 aa10.88□□□□□ -0.67
VCAN-207ENST00000507162 SLC4A1APQ9BWU0 796 aaKnown RBP10.88□□□□□ -0.67
VCAN-207ENST00000507162 C14orf93Q9H972 538 aaKnown RBP10.88□□□□□ -0.67
VCAN-207ENST00000507162 PPLO60437 1756 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms