RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 NUDT12Q9BQG2 462 aa8.27□□□□□ -1.09
CLDND1-212ENST00000506885 PCDHB15Q9Y5E8 787 aa8.27□□□□□ -1.09
CLDND1-212ENST00000506885 ARID3CA6NKF2 412 aa8.26□□□□□ -1.09
CLDND1-212ENST00000506885 ST8SIA5O15466 376 aa8.26□□□□□ -1.09
CLDND1-212ENST00000506885 LIMD1Q9UGP4 676 aa8.26□□□□□ -1.09
CLDND1-212ENST00000506885 APBB1O00213 710 aa8.25□□□□□ -1.09
CLDND1-212ENST00000506885 GDF9O60383 454 aa8.25□□□□□ -1.09
CLDND1-212ENST00000506885 LILRB3O75022 631 aa8.25□□□□□ -1.09
CLDND1-212ENST00000506885 CCNYL3P0C7X3 344 aa8.25□□□□□ -1.09
CLDND1-212ENST00000506885 CSPP1Q1MSJ5 1256 aa8.25□□□□□ -1.09
CLDND1-212ENST00000506885 GOPCQ9HD26 462 aa8.25□□□□□ -1.09
CLDND1-212ENST00000506885 POLR3EQ9NVU0 708 aa8.25□□□□□ -1.09
CLDND1-212ENST00000506885 ATP1B4Q9UN42 357 aaPredicted RBP8.25□□□□□ -1.09
CLDND1-212ENST00000506885 LYPD8Q6UX82 237 aa8.23□□□□□ -1.09
CLDND1-212ENST00000506885 HELBQ8NG08 1087 aaPredicted RBP8.23□□□□□ -1.09
CLDND1-212ENST00000506885 EVA1BQ9NVM1 165 aa8.23□□□□□ -1.09
CLDND1-212ENST00000506885 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
CLDND1-212ENST00000506885 FOXC1Q12948 553 aa8.22□□□□□ -1.09
CLDND1-212ENST00000506885 TRIM32Q13049 653 aa8.22□□□□□ -1.09
CLDND1-212ENST00000506885 CABLES1Q8TDN4 633 aa8.22□□□□□ -1.09
CLDND1-212ENST00000506885 CFAP99D6REC4 459 aa8.21□□□□□ -1.1
CLDND1-212ENST00000506885 WNT7BP56706 349 aa8.21□□□□□ -1.1
CLDND1-212ENST00000506885 KCNH2Q12809 1159 aa8.21□□□□□ -1.1
CLDND1-212ENST00000506885 QPCTQ16769 361 aa8.21□□□□□ -1.1
CLDND1-212ENST00000506885 AAASQ9NRG9 546 aa8.21□□□□□ -1.1
CLDND1-212ENST00000506885 PCMTD1Q96MG8 357 aaPredicted RBP8.2□□□□□ -1.1
CLDND1-212ENST00000506885 PPP2R2DQ66LE6 453 aa8.19□□□□□ -1.1
CLDND1-212ENST00000506885 TSC1Q92574 1164 aa8.19□□□□□ -1.1
CLDND1-212ENST00000506885 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.19□□□□□ -1.1
CLDND1-212ENST00000506885 WNT7AO00755 349 aa8.18□□□□□ -1.1
CLDND1-212ENST00000506885 CTHP32929 405 aa8.18□□□□□ -1.1
CLDND1-212ENST00000506885 NFX1Q12986 1120 aaKnown RBP8.17□□□□□ -1.1
CLDND1-212ENST00000506885 RTL5Q5HYW3 569 aaPredicted RBP8.17□□□□□ -1.1
CLDND1-212ENST00000506885 ARMC2Q8NEN0 867 aa8.17□□□□□ -1.1
CLDND1-212ENST00000506885 UNC93B1Q9H1C4 597 aa8.17□□□□□ -1.1
CLDND1-212ENST00000506885 PKD2L1Q9P0L9 805 aa8.17□□□□□ -1.1
CLDND1-212ENST00000506885 PTCRAQ6ISU1 281 aaPredicted RBP8.16□□□□□ -1.1
CLDND1-212ENST00000506885 CYP4X1Q8N118 509 aa8.16□□□□□ -1.1
CLDND1-212ENST00000506885 PROCA1Q8NCQ7 364 aaPredicted RBP8.16□□□□□ -1.1
CLDND1-212ENST00000506885 FLIIQ13045 1269 aa8.15□□□□□ -1.1
CLDND1-212ENST00000506885 F12P00748 615 aaPredicted RBP8.14□□□□□ -1.11
CLDND1-212ENST00000506885 CCDC82Q8N4S0 544 aa8.14□□□□□ -1.11
CLDND1-212ENST00000506885 KCTD17Q8N5Z5 321 aa8.14□□□□□ -1.11
CLDND1-212ENST00000506885 DACH1Q9UI36 760 aa8.14□□□□□ -1.11
CLDND1-212ENST00000506885 TMEM259Q4ZIN3 620 aa8.13□□□□□ -1.11
CLDND1-212ENST00000506885 RC3H1Q5TC82 1133 aaKnown RBP8.13□□□□□ -1.11
CLDND1-212ENST00000506885 SNIP1Q8TAD8 396 aaKnown RBP8.13□□□□□ -1.11
CLDND1-212ENST00000506885 TTC24A2A3L6 582 aaPredicted RBP8.12□□□□□ -1.11
CLDND1-212ENST00000506885 AXIN1O15169 862 aa8.12□□□□□ -1.11
CLDND1-212ENST00000506885 CRIPAKQ8N1N5 446 aa8.12□□□□□ -1.11
CLDND1-212ENST00000506885 EHBP1Q8NDI1 1231 aa8.12□□□□□ -1.11
CLDND1-212ENST00000506885 TOR4AQ9NXH8 423 aa8.12□□□□□ -1.11
CLDND1-212ENST00000506885 GMPR2Q9P2T1 348 aaKnown RBP8.12□□□□□ -1.11
CLDND1-212ENST00000506885 C11orf95C9JLR9 678 aaPredicted RBP8.11□□□□□ -1.11
CLDND1-212ENST00000506885 PER1O15534 1290 aaPredicted RBP8.11□□□□□ -1.11
CLDND1-212ENST00000506885 CTDSPL2Q05D32 466 aa8.11□□□□□ -1.11
CLDND1-212ENST00000506885 ZNF511Q8NB15 262 aa8.11□□□□□ -1.11
CLDND1-212ENST00000506885 PNMA1Q8ND90 353 aa8.11□□□□□ -1.11
CLDND1-212ENST00000506885 BAP1Q92560 729 aa8.11□□□□□ -1.11
CLDND1-212ENST00000506885 GPKOWQ92917 476 aaPredicted RBP eCLIP8.11□□□□□ -1.11
CLDND1-212ENST00000506885 MRGPRX2Q96LB1 330 aa8.11□□□□□ -1.11
CLDND1-212ENST00000506885 AP1G2O75843 785 aa8.1□□□□□ -1.11
CLDND1-212ENST00000506885 VARSP26640 1264 aaKnown RBP8.1□□□□□ -1.11
CLDND1-212ENST00000506885 RFC5P40937 340 aa8.1□□□□□ -1.11
CLDND1-212ENST00000506885 SH3BP2P78314 561 aa8.1□□□□□ -1.11
CLDND1-212ENST00000506885 SKOR1P84550 965 aa8.1□□□□□ -1.11
CLDND1-212ENST00000506885 NBPF14Q5TI25 921 aa8.1□□□□□ -1.11
CLDND1-212ENST00000506885 MAP10Q9P2G4 905 aa8.1□□□□□ -1.11
CLDND1-212ENST00000506885 LOC105371045A0A1W2PR82 267 aa8.09□□□□□ -1.11
CLDND1-212ENST00000506885 AVPP01185 164 aa8.09□□□□□ -1.11
CLDND1-212ENST00000506885 RAD21O60216 631 aa8.08□□□□□ -1.12
CLDND1-212ENST00000506885 BPHLQ86WA6 291 aaPredicted RBP8.08□□□□□ -1.12
CLDND1-212ENST00000506885 TRAIPQ9BWF2 469 aa8.08□□□□□ -1.12
CLDND1-212ENST00000506885 ZC3H4Q9UPT8 1303 aaKnown RBP8.07□□□□□ -1.12
CLDND1-212ENST00000506885 A6NJR5 290 aa8.07□□□□□ -1.12
CLDND1-212ENST00000506885 CTC1Q2NKJ3 1217 aa8.07□□□□□ -1.12
CLDND1-212ENST00000506885 LINC01559Q495D7 138 aa8.07□□□□□ -1.12
CLDND1-212ENST00000506885 MPNDQ8N594 471 aa8.07□□□□□ -1.12
CLDND1-212ENST00000506885 TRAK2O60296 914 aa8.06□□□□□ -1.12
CLDND1-212ENST00000506885 AGERQ15109 404 aa8.06□□□□□ -1.12
CLDND1-212ENST00000506885 FAM174AQ8TBP5 190 aa8.06□□□□□ -1.12
CLDND1-212ENST00000506885 SIAH2O43255 324 aa8.05□□□□□ -1.12
CLDND1-212ENST00000506885 BANK1Q8NDB2 785 aa8.05□□□□□ -1.12
CLDND1-212ENST00000506885 USP17L8P0C7I0 530 aa8.04□□□□□ -1.12
CLDND1-212ENST00000506885 LRRN4Q8WUT4 740 aa8.04□□□□□ -1.12
CLDND1-212ENST00000506885 FKBPLQ9UIM3 349 aa8.04□□□□□ -1.12
CLDND1-212ENST00000506885 ALDH1A1P00352 501 aa8.03□□□□□ -1.12
CLDND1-212ENST00000506885 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
CLDND1-212ENST00000506885 FBXO31Q5XUX0 539 aaPredicted RBP8.03□□□□□ -1.12
CLDND1-212ENST00000506885 PDXDC2PQ6P474 469 aa8.03□□□□□ -1.12
CLDND1-212ENST00000506885 RGS22Q8NE09 1264 aa8.03□□□□□ -1.12
CLDND1-212ENST00000506885 CLUAP1Q96AJ1 413 aa8.03□□□□□ -1.12
CLDND1-212ENST00000506885 WASF2Q9Y6W5 498 aa8.03□□□□□ -1.12
CLDND1-212ENST00000506885 SOCS7O14512 581 aa8.02□□□□□ -1.13
CLDND1-212ENST00000506885 SMPD1P17405 629 aa8.02□□□□□ -1.13
CLDND1-212ENST00000506885 AEBP1Q8IUX7 1158 aa8.02□□□□□ -1.13
CLDND1-212ENST00000506885 GPSM3Q9Y4H4 160 aa8.02□□□□□ -1.13
CLDND1-212ENST00000506885 PTK2Q05397 1052 aa8.01□□□□□ -1.13
CLDND1-212ENST00000506885 NR6A1Q15406 480 aa8.01□□□□□ -1.13
CLDND1-212ENST00000506885 FOXJ1Q92949 421 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms