RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 PIK3R4Q99570 1358 aa15.27■□□□□ 0.03
ITGA3-208ENST00000506437 MRS2Q9HD23 443 aa15.27■□□□□ 0.03
ITGA3-208ENST00000506437 ATAD2Q6PL18 1390 aa15.26■□□□□ 0.03
ITGA3-208ENST00000506437 PPM1GO15355 546 aaPredicted RBP15.26■□□□□ 0.03
ITGA3-208ENST00000506437 ATF3P18847 181 aa15.26■□□□□ 0.03
ITGA3-208ENST00000506437 HDGFL2Q7Z4V5 671 aaPredicted RBP15.26■□□□□ 0.03
ITGA3-208ENST00000506437 ATP7BP35670 1465 aa15.26■□□□□ 0.03
ITGA3-208ENST00000506437 KTN1Q86UP2 1357 aaKnown RBP15.25■□□□□ 0.03
ITGA3-208ENST00000506437 A0A0U1RQG5 324 aaPredicted RBP15.25■□□□□ 0.03
ITGA3-208ENST00000506437 TERF2IPQ9NYB0 399 aa15.25■□□□□ 0.03
ITGA3-208ENST00000506437 CD163L1Q9NR16 1453 aa15.25■□□□□ 0.03
ITGA3-208ENST00000506437 C19orf44Q9H6X5 657 aa15.24■□□□□ 0.03
ITGA3-208ENST00000506437 NKTRP30414 1462 aaKnown RBP15.24■□□□□ 0.03
ITGA3-208ENST00000506437 FYB1O15117 783 aa15.23■□□□□ 0.03
ITGA3-208ENST00000506437 MORC1Q86VD1 984 aa15.23■□□□□ 0.03
ITGA3-208ENST00000506437 ANKRD36BQ8N2N9 1353 aa15.23■□□□□ 0.03
ITGA3-208ENST00000506437 ADGRL3Q9HAR2 1447 aa15.22■□□□□ 0.03
ITGA3-208ENST00000506437 PHF8Q9UPP1 1060 aa15.22■□□□□ 0.03
ITGA3-208ENST00000506437 USP32Q8NFA0 1604 aa15.22■□□□□ 0.03
ITGA3-208ENST00000506437 ZBTB7CA1YPR0 619 aa15.21■□□□□ 0.03
ITGA3-208ENST00000506437 PSME1Q06323 249 aa15.2■□□□□ 0.02
ITGA3-208ENST00000506437 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
ITGA3-208ENST00000506437 CGNL1Q0VF96 1302 aa15.2■□□□□ 0.02
ITGA3-208ENST00000506437 PIP4K2BP78356 416 aa15.2■□□□□ 0.02
ITGA3-208ENST00000506437 RRS1Q15050 365 aaKnown RBP15.19■□□□□ 0.02
ITGA3-208ENST00000506437 LRRC7Q96NW7 1537 aa15.19■□□□□ 0.02
ITGA3-208ENST00000506437 PPP2R1AP30153 589 aa15.18■□□□□ 0.02
ITGA3-208ENST00000506437 MSH6P52701 1360 aa15.18■□□□□ 0.02
ITGA3-208ENST00000506437 ABTB2Q8N961 1025 aa15.16■□□□□ 0.02
ITGA3-208ENST00000506437 XIRP1Q702N8 1843 aaKnown RBP15.16■□□□□ 0.02
ITGA3-208ENST00000506437 NWD1Q149M9 1564 aa15.16■□□□□ 0.02
ITGA3-208ENST00000506437 TTC21BQ7Z4L5 1316 aa15.16■□□□□ 0.02
ITGA3-208ENST00000506437 PLEKHG3A1L390 1219 aa15.15■□□□□ 0.02
ITGA3-208ENST00000506437 CABLES1Q8TDN4 633 aa15.15■□□□□ 0.02
ITGA3-208ENST00000506437 SLAIN2Q9P270 581 aa15.15■□□□□ 0.02
ITGA3-208ENST00000506437 MYBBP1AQ9BQG0 1328 aaKnown RBP15.15■□□□□ 0.02
ITGA3-208ENST00000506437 MTHFSP49914 203 aa15.15■□□□□ 0.02
ITGA3-208ENST00000506437 NLRP6P59044 892 aa15.15■□□□□ 0.02
ITGA3-208ENST00000506437 PARD3Q8TEW0 1356 aa15.15■□□□□ 0.02
ITGA3-208ENST00000506437 EMILIN1Q9Y6C2 1016 aa15.15■□□□□ 0.02
ITGA3-208ENST00000506437 CADPS2Q86UW7 1296 aa15.14■□□□□ 0.01
ITGA3-208ENST00000506437 PUS7Q96PZ0 661 aaKnown RBP15.14■□□□□ 0.01
ITGA3-208ENST00000506437 CPSF1Q10570 1443 aaKnown RBP15.14■□□□□ 0.01
ITGA3-208ENST00000506437 RALBP1Q15311 655 aa15.14■□□□□ 0.01
ITGA3-208ENST00000506437 ADGRB2O60241 1585 aa15.14■□□□□ 0.01
ITGA3-208ENST00000506437 C1orf167Q5SNV9 1468 aa15.14■□□□□ 0.01
ITGA3-208ENST00000506437 FMN2Q9NZ56 1722 aa15.13■□□□□ 0.01
ITGA3-208ENST00000506437 BRINP3Q76B58 766 aa15.13■□□□□ 0.01
ITGA3-208ENST00000506437 KRT28Q7Z3Y7 464 aa15.12■□□□□ 0.01
ITGA3-208ENST00000506437 USP6P35125 1406 aa15.12■□□□□ 0.01
ITGA3-208ENST00000506437 MST1RQ04912 1400 aa15.12■□□□□ 0.01
ITGA3-208ENST00000506437 COG3Q96JB2 828 aa15.12■□□□□ 0.01
ITGA3-208ENST00000506437 CDC42BPGQ6DT37 1551 aa15.11■□□□□ 0.01
ITGA3-208ENST00000506437 NLRP13Q86W25 1043 aa15.11■□□□□ 0.01
ITGA3-208ENST00000506437 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
ITGA3-208ENST00000506437 CCDC146Q8IYE0 955 aa15.11■□□□□ 0.01
ITGA3-208ENST00000506437 LAS1LQ9Y4W2 734 aaKnown RBP15.11■□□□□ 0.01
ITGA3-208ENST00000506437 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
ITGA3-208ENST00000506437 HNRNPUQ00839 825 aaKnown RBP eCLIP15.1■□□□□ 0.01
ITGA3-208ENST00000506437 B4GALNT3Q6L9W6 998 aa15.1■□□□□ 0.01
ITGA3-208ENST00000506437 NINLQ9Y2I6 1382 aa15.09■□□□□ 0.01
ITGA3-208ENST00000506437 ITSN1Q15811 1721 aa15.09■□□□□ 0.01
ITGA3-208ENST00000506437 EDC4Q6P2E9 1401 aaKnown RBP15.08■□□□□ 0.01
ITGA3-208ENST00000506437 LTV1Q96GA3 475 aaPredicted RBP15.08■□□□□ 0
ITGA3-208ENST00000506437 TOPAZ1Q8N9V7 1692 aa15.08■□□□□ 0
ITGA3-208ENST00000506437 ZC3H6P61129 1189 aaKnown RBP15.07■□□□□ 0
ITGA3-208ENST00000506437 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
ITGA3-208ENST00000506437 ADAMTS8Q9UP79 889 aa15.07■□□□□ 0
ITGA3-208ENST00000506437 U2SURPO15042 1029 aaKnown RBP15.07■□□□□ 0
ITGA3-208ENST00000506437 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
ITGA3-208ENST00000506437 UBAP1LF5GYI3 381 aa15.06■□□□□ 0
ITGA3-208ENST00000506437 POLKQ9UBT6 870 aa15.06■□□□□ 0
ITGA3-208ENST00000506437 ANKARQ7Z5J8 1434 aa15.06■□□□□ 0
ITGA3-208ENST00000506437 NEFMP07197 916 aa15.06■□□□□ 0
ITGA3-208ENST00000506437 GLIPR1L2Q4G1C9 344 aa15.05■□□□□ 0
ITGA3-208ENST00000506437 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
ITGA3-208ENST00000506437 AKAP12Q02952 1782 aa15.05■□□□□ -0
ITGA3-208ENST00000506437 NEUROD2Q15784 382 aa15.04■□□□□ -0
ITGA3-208ENST00000506437 HSP90AB2PQ58FF8 381 aa15.04■□□□□ -0
ITGA3-208ENST00000506437 LTBP4Q8N2S1 1624 aa15.04■□□□□ -0
ITGA3-208ENST00000506437 MON2Q7Z3U7 1717 aa15.03■□□□□ -0
ITGA3-208ENST00000506437 HMOX1P09601 288 aa15.03■□□□□ -0
ITGA3-208ENST00000506437 CHRNA2Q15822 529 aa15.03■□□□□ -0
ITGA3-208ENST00000506437 WDR43Q15061 677 aaKnown RBP eCLIP15.02■□□□□ -0
ITGA3-208ENST00000506437 MAP2P11137 1827 aaKnown RBP15.02□□□□□ -0.01
ITGA3-208ENST00000506437 IPO9Q96P70 1041 aaKnown RBP15.02□□□□□ -0.01
ITGA3-208ENST00000506437 RRP7AQ9Y3A4 280 aaKnown RBP15.02□□□□□ -0.01
ITGA3-208ENST00000506437 SSH2Q76I76 1423 aa15.02□□□□□ -0.01
ITGA3-208ENST00000506437 KIF20BQ96Q89 1820 aa15.02□□□□□ -0.01
ITGA3-208ENST00000506437 MAP3K19Q56UN5 1328 aa15.01□□□□□ -0.01
ITGA3-208ENST00000506437 U2AF1L5P0DN76 240 aaPredicted RBP15.01□□□□□ -0.01
ITGA3-208ENST00000506437 U2AF1Q01081 240 aaKnown RBP eCLIP15.01□□□□□ -0.01
ITGA3-208ENST00000506437 BRD4O60885 1362 aaPredicted RBP15.01□□□□□ -0.01
ITGA3-208ENST00000506437 PIK3C2AO00443 1686 aa15□□□□□ -0.01
ITGA3-208ENST00000506437 NPHP3Q7Z494 1330 aa15□□□□□ -0.01
ITGA3-208ENST00000506437 AMPHP49418 695 aa15□□□□□ -0.01
ITGA3-208ENST00000506437 NPC1L1Q9UHC9 1359 aa15□□□□□ -0.01
ITGA3-208ENST00000506437 RSPH6AQ9H0K4 717 aa15□□□□□ -0.01
ITGA3-208ENST00000506437 RBM10P98175 930 aaKnown RBP14.99□□□□□ -0.01
ITGA3-208ENST00000506437 HAP1P54257 671 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms