RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CCDC27Q2M243 656 aa19.98■□□□□ 0.79
SCLT1-208ENST00000506368 PCDHB15Q9Y5E8 787 aa19.98■□□□□ 0.79
SCLT1-208ENST00000506368 SMC5Q8IY18 1101 aa19.97■□□□□ 0.79
SCLT1-208ENST00000506368 PPP1R9BQ96SB3 815 aa19.96■□□□□ 0.79
SCLT1-208ENST00000506368 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
SCLT1-208ENST00000506368 ANP32BQ92688 251 aaKnown RBP19.96■□□□□ 0.79
SCLT1-208ENST00000506368 IQSEC2Q5JU85 1478 aa19.96■□□□□ 0.79
SCLT1-208ENST00000506368 PREX1Q8TCU6 1659 aa19.95■□□□□ 0.78
SCLT1-208ENST00000506368 RBM25P49756 843 aaKnown RBP19.95■□□□□ 0.78
SCLT1-208ENST00000506368 CALD1Q05682 793 aaKnown RBP19.95■□□□□ 0.78
SCLT1-208ENST00000506368 HS1BP3Q53T59 392 aa19.95■□□□□ 0.78
SCLT1-208ENST00000506368 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.94■□□□□ 0.78
SCLT1-208ENST00000506368 ARXQ96QS3 562 aa19.94■□□□□ 0.78
SCLT1-208ENST00000506368 ARHGAP31Q2M1Z3 1444 aa19.94■□□□□ 0.78
SCLT1-208ENST00000506368 HDAC1Q13547 482 aaPredicted RBP19.93■□□□□ 0.78
SCLT1-208ENST00000506368 MVPQ14764 893 aaKnown RBP19.93■□□□□ 0.78
SCLT1-208ENST00000506368 TRPM2O94759 1503 aa19.93■□□□□ 0.78
SCLT1-208ENST00000506368 ERBB4Q15303 1308 aa19.93■□□□□ 0.78
SCLT1-208ENST00000506368 RUNDC1Q96C34 613 aa19.93■□□□□ 0.78
SCLT1-208ENST00000506368 ERVK-7P63135 1459 aa19.92■□□□□ 0.78
SCLT1-208ENST00000506368 UGGT1Q9NYU2 1555 aa19.92■□□□□ 0.78
SCLT1-208ENST00000506368 ZSCAN30Q86W11 494 aa19.92■□□□□ 0.78
SCLT1-208ENST00000506368 SHPRHQ149N8 1683 aa19.92■□□□□ 0.78
SCLT1-208ENST00000506368 RAB3GAP1Q15042 981 aa19.91■□□□□ 0.78
SCLT1-208ENST00000506368 OFD1O75665 1012 aa19.91■□□□□ 0.78
SCLT1-208ENST00000506368 MTERF4Q7Z6M4 381 aaKnown RBP19.91■□□□□ 0.78
SCLT1-208ENST00000506368 DMRT2Q9Y5R5 561 aa19.9■□□□□ 0.78
SCLT1-208ENST00000506368 GOLGA6L22H0YM25 854 aa19.9■□□□□ 0.78
SCLT1-208ENST00000506368 SPATA31D1Q6ZQQ2 1576 aa19.89■□□□□ 0.77
SCLT1-208ENST00000506368 MFAP1P55081 439 aaKnown RBP19.89■□□□□ 0.77
SCLT1-208ENST00000506368 CLEC17AQ6ZS10 378 aa19.89■□□□□ 0.77
SCLT1-208ENST00000506368 ZKSCAN2Q63HK3 967 aa19.88■□□□□ 0.77
SCLT1-208ENST00000506368 NOS1P29475 1434 aa19.88■□□□□ 0.77
SCLT1-208ENST00000506368 SBNO2Q9Y2G9 1366 aa19.88■□□□□ 0.77
SCLT1-208ENST00000506368 KIAA1211Q6ZU35 1233 aa19.88■□□□□ 0.77
SCLT1-208ENST00000506368 TNPO1Q92973 898 aaKnown RBP19.88■□□□□ 0.77
SCLT1-208ENST00000506368 KIF16BQ96L93 1317 aa19.87■□□□□ 0.77
SCLT1-208ENST00000506368 MSNP26038 577 aaKnown RBP19.87■□□□□ 0.77
SCLT1-208ENST00000506368 MYO3AQ8NEV4 1616 aa19.87■□□□□ 0.77
SCLT1-208ENST00000506368 TNRQ92752 1358 aa19.87■□□□□ 0.77
SCLT1-208ENST00000506368 SPRYD3Q8NCJ5 442 aa19.87■□□□□ 0.77
SCLT1-208ENST00000506368 RLBP1P12271 317 aa19.86■□□□□ 0.77
SCLT1-208ENST00000506368 USP32Q8NFA0 1604 aa19.86■□□□□ 0.77
SCLT1-208ENST00000506368 DDX19BQ9UMR2 479 aa19.85■□□□□ 0.77
SCLT1-208ENST00000506368 DZIP1LQ8IYY4 767 aaKnown RBP19.85■□□□□ 0.77
SCLT1-208ENST00000506368 PTPRTO14522 1441 aa19.84■□□□□ 0.77
SCLT1-208ENST00000506368 NASPP49321 788 aaPredicted RBP19.83■□□□□ 0.77
SCLT1-208ENST00000506368 IDI1Q13907 227 aa19.83■□□□□ 0.77
SCLT1-208ENST00000506368 FTSJ3Q8IY81 847 aaKnown RBP19.83■□□□□ 0.77
SCLT1-208ENST00000506368 SETD1BQ9UPS6 1966 aaKnown RBP19.83■□□□□ 0.76
SCLT1-208ENST00000506368 CLTCL1P53675 1640 aa19.83■□□□□ 0.76
SCLT1-208ENST00000506368 HSP90AB1P08238 724 aaKnown RBP19.83■□□□□ 0.76
SCLT1-208ENST00000506368 KLHL40Q2TBA0 621 aa19.83■□□□□ 0.76
SCLT1-208ENST00000506368 GAS2L3Q86XJ1 694 aa19.82■□□□□ 0.76
SCLT1-208ENST00000506368 MYOM2P54296 1465 aa19.82■□□□□ 0.76
SCLT1-208ENST00000506368 PIK3C2BO00750 1634 aa19.81■□□□□ 0.76
SCLT1-208ENST00000506368 TCP11L2Q8N4U5 519 aa19.8■□□□□ 0.76
SCLT1-208ENST00000506368 MYO5BQ9ULV0 1848 aa19.8■□□□□ 0.76
SCLT1-208ENST00000506368 ADGRB2O60241 1585 aa19.8■□□□□ 0.76
SCLT1-208ENST00000506368 MCM5P33992 734 aa19.8■□□□□ 0.76
SCLT1-208ENST00000506368 CFAP44Q96MT7 982 aa19.8■□□□□ 0.76
SCLT1-208ENST00000506368 ZNF500O60304 480 aaPredicted RBP19.79■□□□□ 0.76
SCLT1-208ENST00000506368 CHGAP10645 457 aaKnown RBP19.79■□□□□ 0.76
SCLT1-208ENST00000506368 ZNF445P59923 1031 aa19.79■□□□□ 0.76
SCLT1-208ENST00000506368 CSPP1Q1MSJ5 1256 aa19.79■□□□□ 0.76
SCLT1-208ENST00000506368 CFAP53Q96M91 514 aa19.78■□□□□ 0.76
SCLT1-208ENST00000506368 BMP2KLQ5H9B9 411 aa19.77■□□□□ 0.75
SCLT1-208ENST00000506368 CEP170BQ9Y4F5 1589 aaPredicted RBP19.76■□□□□ 0.75
SCLT1-208ENST00000506368 K7ELQ4 463 aaPredicted RBP19.76■□□□□ 0.75
SCLT1-208ENST00000506368 AEBP2Q6ZN18 517 aaPredicted RBP19.76■□□□□ 0.75
SCLT1-208ENST00000506368 CARD14Q9BXL6 1004 aa19.76■□□□□ 0.75
SCLT1-208ENST00000506368 HSPA2P54652 639 aa19.75■□□□□ 0.75
SCLT1-208ENST00000506368 CHMP4BQ9H444 224 aaKnown RBP19.75■□□□□ 0.75
SCLT1-208ENST00000506368 NOL7Q9UMY1 257 aaKnown RBP19.75■□□□□ 0.75
SCLT1-208ENST00000506368 SLC52A1Q9NWF4 448 aa19.75■□□□□ 0.75
SCLT1-208ENST00000506368 NUCB1Q02818 461 aa19.74■□□□□ 0.75
SCLT1-208ENST00000506368 UBR1Q8IWV7 1749 aa19.74■□□□□ 0.75
SCLT1-208ENST00000506368 LMTK3Q96Q04 1460 aa19.74■□□□□ 0.75
SCLT1-208ENST00000506368 ABCC11Q96J66 1382 aa19.74■□□□□ 0.75
SCLT1-208ENST00000506368 SMAP1Q8IYB5 467 aaPredicted RBP19.74■□□□□ 0.75
SCLT1-208ENST00000506368 NSD2O96028 1365 aa19.73■□□□□ 0.75
SCLT1-208ENST00000506368 MORC1Q86VD1 984 aa19.73■□□□□ 0.75
SCLT1-208ENST00000506368 STAG3Q9UJ98 1225 aa19.73■□□□□ 0.75
SCLT1-208ENST00000506368 KIF1BO60333 1816 aa19.73■□□□□ 0.75
SCLT1-208ENST00000506368 ZNF142P52746 1687 aaPredicted RBP19.73■□□□□ 0.75
SCLT1-208ENST00000506368 TMEM131LA2VDJ0 1609 aa19.73■□□□□ 0.75
SCLT1-208ENST00000506368 DYNC1I1O14576 645 aa19.72■□□□□ 0.75
SCLT1-208ENST00000506368 A2ML1A8K2U0 1454 aa19.72■□□□□ 0.75
SCLT1-208ENST00000506368 NUCB2P80303 420 aa19.72■□□□□ 0.75
SCLT1-208ENST00000506368 PDLIM2Q96JY6 352 aa19.72■□□□□ 0.75
SCLT1-208ENST00000506368 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
SCLT1-208ENST00000506368 TNNQ9UQP3 1299 aa19.72■□□□□ 0.75
SCLT1-208ENST00000506368 SETBP1Q9Y6X0 1596 aa19.72■□□□□ 0.75
SCLT1-208ENST00000506368 IL16Q14005 1332 aa19.71■□□□□ 0.75
SCLT1-208ENST00000506368 RIPK4P57078 832 aa19.71■□□□□ 0.75
SCLT1-208ENST00000506368 ATF7IPQ6VMQ6 1270 aa19.71■□□□□ 0.75
SCLT1-208ENST00000506368 DDX49Q9Y6V7 483 aaKnown RBP19.71■□□□□ 0.75
SCLT1-208ENST00000506368 IPO8O15397 1037 aaKnown RBP19.71■□□□□ 0.75
SCLT1-208ENST00000506368 ADGRB3O60242 1522 aa19.7■□□□□ 0.74
SCLT1-208ENST00000506368 NUTM2DQ5VT03 806 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms