RNA–Protein interactions for RNA: ENST00000506065.1

PRDM5-208, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 696 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-208ENST00000506065 VPS9D1Q9Y2B5 631 aa11.9□□□□□ -0.5
PRDM5-208ENST00000506065 ZBBXA8MT70 800 aa11.89□□□□□ -0.51
PRDM5-208ENST00000506065 ACTN4O43707 911 aaKnown RBP11.89□□□□□ -0.51
PRDM5-208ENST00000506065 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
PRDM5-208ENST00000506065 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
PRDM5-208ENST00000506065 NFATC2IPQ8NCF5 419 aa11.89□□□□□ -0.51
PRDM5-208ENST00000506065 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
PRDM5-208ENST00000506065 AXIN2Q9Y2T1 843 aa11.89□□□□□ -0.51
PRDM5-208ENST00000506065 ELOAQ14241 798 aaKnown RBP11.88□□□□□ -0.51
PRDM5-208ENST00000506065 ZC3H4Q9UPT8 1303 aaKnown RBP11.87□□□□□ -0.51
PRDM5-208ENST00000506065 FBXO45P0C2W1 286 aa11.87□□□□□ -0.51
PRDM5-208ENST00000506065 PUS10Q3MIT2 529 aaKnown RBP11.87□□□□□ -0.51
PRDM5-208ENST00000506065 ZNF592Q92610 1267 aa11.87□□□□□ -0.51
PRDM5-208ENST00000506065 FKBPLQ9UIM3 349 aa11.87□□□□□ -0.51
PRDM5-208ENST00000506065 ZFRQ96KR1 1074 aaKnown RBP11.86□□□□□ -0.51
PRDM5-208ENST00000506065 LRCH3Q96II8 777 aa11.85□□□□□ -0.51
PRDM5-208ENST00000506065 USB1Q9BQ65 265 aaKnown RBP11.85□□□□□ -0.51
PRDM5-208ENST00000506065 HCSTQ9UBK5 93 aa11.85□□□□□ -0.51
PRDM5-208ENST00000506065 GNEQ9Y223 722 aaKnown RBP11.85□□□□□ -0.51
PRDM5-208ENST00000506065 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
PRDM5-208ENST00000506065 AMOTL2Q9Y2J4 779 aa11.84□□□□□ -0.51
PRDM5-208ENST00000506065 USP17L3A6NCW0 530 aa11.83□□□□□ -0.52
PRDM5-208ENST00000506065 USP17L4A6NCW7 530 aa11.83□□□□□ -0.52
PRDM5-208ENST00000506065 E9PSI1 815 aa11.83□□□□□ -0.52
PRDM5-208ENST00000506065 USP17L2Q6R6M4 530 aa11.83□□□□□ -0.52
PRDM5-208ENST00000506065 USP17L1Q7RTZ2 530 aa11.83□□□□□ -0.52
PRDM5-208ENST00000506065 SKIP12755 728 aa11.82□□□□□ -0.52
PRDM5-208ENST00000506065 PLEKHM2Q8IWE5 1019 aa11.82□□□□□ -0.52
PRDM5-208ENST00000506065 CCER1Q8TC90 406 aaPredicted RBP11.82□□□□□ -0.52
PRDM5-208ENST00000506065 NOVA2Q9UNW9 492 aaKnown RBP11.82□□□□□ -0.52
PRDM5-208ENST00000506065 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
PRDM5-208ENST00000506065 RNF19BQ6ZMZ0 732 aa11.81□□□□□ -0.52
PRDM5-208ENST00000506065 MRPL50Q8N5N7 158 aaKnown RBP11.81□□□□□ -0.52
PRDM5-208ENST00000506065 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.81□□□□□ -0.52
PRDM5-208ENST00000506065 USP17L5A8MUK1 530 aa11.8□□□□□ -0.52
PRDM5-208ENST00000506065 PIK3CDO00329 1044 aa11.8□□□□□ -0.52
PRDM5-208ENST00000506065 PTPRNQ16849 979 aa11.8□□□□□ -0.52
PRDM5-208ENST00000506065 ZNF428Q96B54 188 aa11.8□□□□□ -0.52
PRDM5-208ENST00000506065 BHMG1C9JSJ3 638 aaPredicted RBP11.79□□□□□ -0.52
PRDM5-208ENST00000506065 F12P00748 615 aaPredicted RBP11.79□□□□□ -0.52
PRDM5-208ENST00000506065 TMEM164Q5U3C3 297 aa11.79□□□□□ -0.52
PRDM5-208ENST00000506065 BLOC1S3Q6QNY0 202 aa11.79□□□□□ -0.52
PRDM5-208ENST00000506065 ZMIZ1Q9ULJ6 1067 aa11.79□□□□□ -0.52
PRDM5-208ENST00000506065 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
PRDM5-208ENST00000506065 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
PRDM5-208ENST00000506065 MCCD1P59942 119 aaPredicted RBP11.78□□□□□ -0.52
PRDM5-208ENST00000506065 ADGRD1Q6QNK2 874 aa11.78□□□□□ -0.52
PRDM5-208ENST00000506065 TK2O00142 265 aa11.77□□□□□ -0.53
PRDM5-208ENST00000506065 JUNDP17535 347 aa11.77□□□□□ -0.53
PRDM5-208ENST00000506065 SLFNL1Q499Z3 407 aa11.77□□□□□ -0.53
PRDM5-208ENST00000506065 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.53
PRDM5-208ENST00000506065 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
PRDM5-208ENST00000506065 ARMC2Q8NEN0 867 aa11.77□□□□□ -0.53
PRDM5-208ENST00000506065 STK32AQ8WU08 396 aa11.77□□□□□ -0.53
PRDM5-208ENST00000506065 GPSM3Q9Y4H4 160 aa11.77□□□□□ -0.53
PRDM5-208ENST00000506065 NR1I2O75469 434 aa11.76□□□□□ -0.53
PRDM5-208ENST00000506065 CTHP32929 405 aa11.76□□□□□ -0.53
PRDM5-208ENST00000506065 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L15C9J2P7 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L10C9JJH3 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L13C9JLJ4 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L12C9JPN9 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L11C9JVI0 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L21D6R901 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L18D6R9N7 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L22D6RA61 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L17D6RBQ6 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L19D6RCP7 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L20D6RJB6 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 LZTS3O60299 673 aaPredicted RBP11.75□□□□□ -0.53
PRDM5-208ENST00000506065 PTK2Q05397 1052 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 USP17L24Q0WX57 530 aa11.75□□□□□ -0.53
PRDM5-208ENST00000506065 GPKOWQ92917 476 aaPredicted RBP eCLIP11.75□□□□□ -0.53
PRDM5-208ENST00000506065 MKRN1Q9UHC7 482 aaKnown RBP11.75□□□□□ -0.53
PRDM5-208ENST00000506065 ATP5J2-PTCD1G3V325 749 aa11.74□□□□□ -0.53
PRDM5-208ENST00000506065 PPP4CP60510 307 aa11.73□□□□□ -0.53
PRDM5-208ENST00000506065 SCUBE3Q8IX30 993 aa11.73□□□□□ -0.53
PRDM5-208ENST00000506065 DEPDC4Q8N2C3 294 aa11.73□□□□□ -0.53
PRDM5-208ENST00000506065 ANKK1Q8NFD2 765 aa11.73□□□□□ -0.53
PRDM5-208ENST00000506065 FAM174AQ8TBP5 190 aa11.73□□□□□ -0.53
PRDM5-208ENST00000506065 RASA1P20936 1047 aa11.72□□□□□ -0.53
PRDM5-208ENST00000506065 ARID4AP29374 1257 aaPredicted RBP11.72□□□□□ -0.53
PRDM5-208ENST00000506065 NBPF14Q5TI25 921 aa11.72□□□□□ -0.53
PRDM5-208ENST00000506065 PDXDC2PQ6P474 469 aa11.72□□□□□ -0.53
PRDM5-208ENST00000506065 TXNDC2Q86VQ3 553 aa11.72□□□□□ -0.53
PRDM5-208ENST00000506065 RNF135Q8IUD6 432 aa11.72□□□□□ -0.53
PRDM5-208ENST00000506065 FAM200AQ8TCP9 573 aa11.72□□□□□ -0.53
PRDM5-208ENST00000506065 CEP126Q9P2H0 1117 aa11.72□□□□□ -0.53
PRDM5-208ENST00000506065 PCDHB3Q9Y5E6 796 aa11.72□□□□□ -0.53
PRDM5-208ENST00000506065 CCNYL3P0C7X3 344 aa11.71□□□□□ -0.53
PRDM5-208ENST00000506065 PCDHB9Q9Y5E1 797 aa11.71□□□□□ -0.53
PRDM5-208ENST00000506065 GOLGA8CPA6NN73 597 aa11.7□□□□□ -0.54
PRDM5-208ENST00000506065 NCOA4Q13772 614 aa11.7□□□□□ -0.54
PRDM5-208ENST00000506065 CRTC2Q53ET0 693 aaPredicted RBP11.7□□□□□ -0.54
PRDM5-208ENST00000506065 THAP11Q96EK4 314 aa11.7□□□□□ -0.54
PRDM5-208ENST00000506065 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
PRDM5-208ENST00000506065 PTK7Q13308 1070 aa11.69□□□□□ -0.54
PRDM5-208ENST00000506065 STAC3Q96MF2 364 aa11.69□□□□□ -0.54
PRDM5-208ENST00000506065 HPS5Q9UPZ3 1129 aa11.69□□□□□ -0.54
PRDM5-208ENST00000506065 SSFA2P28290 1259 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms