RNA–Protein interactions for RNA: ENST00000506065.1

PRDM5-208, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 696 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-208ENST00000506065 AEBP2Q6ZN18 517 aaPredicted RBP28.41■■■□□ 2.14
PRDM5-208ENST00000506065 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
PRDM5-208ENST00000506065 SENP3Q9H4L4 574 aaPredicted RBP24.29■■□□□ 1.48
PRDM5-208ENST00000506065 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
PRDM5-208ENST00000506065 FOXD1Q16676 465 aa22.72■■□□□ 1.23
PRDM5-208ENST00000506065 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
PRDM5-208ENST00000506065 POTEDQ86YR6 584 aa21.69■■□□□ 1.06
PRDM5-208ENST00000506065 MSH5O43196 834 aa21.4■■□□□ 1.02
PRDM5-208ENST00000506065 PIAS4Q8N2W9 510 aaPredicted RBP21.12■□□□□ 0.97
PRDM5-208ENST00000506065 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
PRDM5-208ENST00000506065 ADRA2BP18089 450 aa20.82■□□□□ 0.92
PRDM5-208ENST00000506065 KCNA4P22459 653 aa19.98■□□□□ 0.79
PRDM5-208ENST00000506065 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.77
PRDM5-208ENST00000506065 PPP4R3CPQ6ZMV5 832 aa19.35■□□□□ 0.69
PRDM5-208ENST00000506065 SLC4A1APQ9BWU0 796 aaKnown RBP19.27■□□□□ 0.68
PRDM5-208ENST00000506065 MAPK8IP2Q13387 824 aaPredicted RBP19.26■□□□□ 0.67
PRDM5-208ENST00000506065 NCBP3Q53F19 620 aaKnown RBP19.21■□□□□ 0.67
PRDM5-208ENST00000506065 DMRT2Q9Y5R5 561 aa19.19■□□□□ 0.66
PRDM5-208ENST00000506065 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
PRDM5-208ENST00000506065 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
PRDM5-208ENST00000506065 NPM3O75607 178 aaKnown RBP18.82■□□□□ 0.6
PRDM5-208ENST00000506065 CACNB1Q02641 598 aaPredicted RBP18.68■□□□□ 0.58
PRDM5-208ENST00000506065 CNKSR2Q8WXI2 1034 aa18.61■□□□□ 0.57
PRDM5-208ENST00000506065 DCAF8L1A6NGE4 600 aa18.47■□□□□ 0.55
PRDM5-208ENST00000506065 ZBTB22O15209 634 aa18.36■□□□□ 0.53
PRDM5-208ENST00000506065 HOXD11P31277 338 aaPredicted RBP18.3■□□□□ 0.52
PRDM5-208ENST00000506065 RNF39Q9H2S5 420 aa18.24■□□□□ 0.51
PRDM5-208ENST00000506065 FOXD4L1Q9NU39 408 aa18.17■□□□□ 0.5
PRDM5-208ENST00000506065 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
PRDM5-208ENST00000506065 RNF216Q9NWF9 866 aaPredicted RBP18.04■□□□□ 0.48
PRDM5-208ENST00000506065 C1QBPQ07021 282 aaKnown RBP17.93■□□□□ 0.46
PRDM5-208ENST00000506065 AMER1Q5JTC6 1135 aaPredicted RBP17.52■□□□□ 0.4
PRDM5-208ENST00000506065 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
PRDM5-208ENST00000506065 ATXN8OSP0DMR3 200 aa17.47■□□□□ 0.39
PRDM5-208ENST00000506065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.47■□□□□ 0.39
PRDM5-208ENST00000506065 MYCNP04198 464 aaPredicted RBP17.44■□□□□ 0.38
PRDM5-208ENST00000506065 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
PRDM5-208ENST00000506065 RTN4Q9NQC3 1192 aaKnown RBP17.42■□□□□ 0.38
PRDM5-208ENST00000506065 FKBP8Q14318 412 aa17.27■□□□□ 0.36
PRDM5-208ENST00000506065 U3KPZ7 1027 aaPredicted RBP17.03■□□□□ 0.32
PRDM5-208ENST00000506065 SPINK5Q9NQ38 1064 aaPredicted RBP16.94■□□□□ 0.3
PRDM5-208ENST00000506065 CAPN15O75808 1086 aa16.93■□□□□ 0.3
PRDM5-208ENST00000506065 DSG3P32926 999 aa16.92■□□□□ 0.3
PRDM5-208ENST00000506065 POTEHQ6S545 545 aa16.91■□□□□ 0.3
PRDM5-208ENST00000506065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
PRDM5-208ENST00000506065 HNRNPUL2Q1KMD3 747 aaKnown RBP16.89■□□□□ 0.29
PRDM5-208ENST00000506065 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
PRDM5-208ENST00000506065 ATF5Q9Y2D1 282 aaPredicted RBP16.78■□□□□ 0.28
PRDM5-208ENST00000506065 TRHP20396 242 aaPredicted RBP16.55■□□□□ 0.24
PRDM5-208ENST00000506065 ABCB7O75027 752 aa16.52■□□□□ 0.24
PRDM5-208ENST00000506065 APLP2Q06481 763 aa16.52■□□□□ 0.24
PRDM5-208ENST00000506065 ZNF219Q9P2Y4 722 aaPredicted RBP16.49■□□□□ 0.23
PRDM5-208ENST00000506065 FBXO3Q9UK99 471 aa16.46■□□□□ 0.23
PRDM5-208ENST00000506065 SPDYE4A6NLX3 237 aa16.32■□□□□ 0.2
PRDM5-208ENST00000506065 FBLN2P98095 1184 aa16.17■□□□□ 0.18
PRDM5-208ENST00000506065 VASPP50552 380 aaPredicted RBP16.14■□□□□ 0.17
PRDM5-208ENST00000506065 PROM2Q8N271 834 aa16.14■□□□□ 0.17
PRDM5-208ENST00000506065 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.17
PRDM5-208ENST00000506065 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
PRDM5-208ENST00000506065 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
PRDM5-208ENST00000506065 POLA2Q14181 598 aa16.01■□□□□ 0.15
PRDM5-208ENST00000506065 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
PRDM5-208ENST00000506065 DCAF8L2P0C7V8 631 aa15.98■□□□□ 0.15
PRDM5-208ENST00000506065 IFNLR1Q8IU57 520 aaPredicted RBP15.95■□□□□ 0.14
PRDM5-208ENST00000506065 HAP1P54257 671 aaPredicted RBP15.9■□□□□ 0.14
PRDM5-208ENST00000506065 ZBTB12Q9Y330 459 aaPredicted RBP15.83■□□□□ 0.12
PRDM5-208ENST00000506065 PKD2Q13563 968 aa15.79■□□□□ 0.12
PRDM5-208ENST00000506065 BCANQ96GW7 911 aa15.71■□□□□ 0.11
PRDM5-208ENST00000506065 VSIG10Q8N0Z9 540 aa15.69■□□□□ 0.1
PRDM5-208ENST00000506065 KLHL34Q8N239 644 aa15.68■□□□□ 0.1
PRDM5-208ENST00000506065 AKT1S1Q96B36 256 aa15.68■□□□□ 0.1
PRDM5-208ENST00000506065 SPOCK2Q92563 424 aa15.67■□□□□ 0.1
PRDM5-208ENST00000506065 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.64■□□□□ 0.09
PRDM5-208ENST00000506065 SP7Q8TDD2 431 aaPredicted RBP15.63■□□□□ 0.09
PRDM5-208ENST00000506065 STAG3Q9UJ98 1225 aa15.59■□□□□ 0.09
PRDM5-208ENST00000506065 ECM2O94769 699 aaPredicted RBP15.58■□□□□ 0.08
PRDM5-208ENST00000506065 BBXQ8WY36 941 aaPredicted RBP15.58■□□□□ 0.08
PRDM5-208ENST00000506065 REM2Q8IYK8 340 aaPredicted RBP15.56■□□□□ 0.08
PRDM5-208ENST00000506065 PIP4P2Q8N4L2 257 aa15.53■□□□□ 0.08
PRDM5-208ENST00000506065 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
PRDM5-208ENST00000506065 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.08
PRDM5-208ENST00000506065 PLCD3Q8N3E9 789 aa15.5■□□□□ 0.07
PRDM5-208ENST00000506065 PAXIP1Q6ZW49 1069 aaPredicted RBP15.45■□□□□ 0.06
PRDM5-208ENST00000506065 SPDYE2BA6NHP3 402 aa15.44■□□□□ 0.06
PRDM5-208ENST00000506065 SPDYE6P0CI01 402 aa15.44■□□□□ 0.06
PRDM5-208ENST00000506065 SPDYE2Q495Y8 402 aa15.44■□□□□ 0.06
PRDM5-208ENST00000506065 TAOK2Q9UL54 1235 aa15.43■□□□□ 0.06
PRDM5-208ENST00000506065 CFAP44Q96MT7 982 aa15.42■□□□□ 0.06
PRDM5-208ENST00000506065 PITPNM1O00562 1244 aa15.41■□□□□ 0.06
PRDM5-208ENST00000506065 NPM1P06748 294 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRDM5-208ENST00000506065 MIER1Q8N108 512 aa15.38■□□□□ 0.05
PRDM5-208ENST00000506065 HAX1O00165 279 aa15.37■□□□□ 0.05
PRDM5-208ENST00000506065 SSUH2Q9Y2M2 353 aa15.37■□□□□ 0.05
PRDM5-208ENST00000506065 RGL2O15211 777 aa15.34■□□□□ 0.05
PRDM5-208ENST00000506065 PRKCSHP14314 528 aaPredicted RBP15.34■□□□□ 0.05
PRDM5-208ENST00000506065 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRDM5-208ENST00000506065 PLEKHG5O94827 1062 aa15.33■□□□□ 0.04
PRDM5-208ENST00000506065 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
PRDM5-208ENST00000506065 SPRYD3Q8NCJ5 442 aa15.33■□□□□ 0.04
PRDM5-208ENST00000506065 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms