RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 PRR36Q9H6K5 1346 aa24.89■■□□□ 1.58
DDR1-257ENST00000505534 SPATA31A5Q5VU36 1347 aa24.88■■□□□ 1.57
DDR1-257ENST00000505534 SPATA31A7Q8IWB4 1347 aa24.88■■□□□ 1.57
DDR1-257ENST00000505534 WASLO00401 505 aaPredicted RBP24.88■■□□□ 1.57
DDR1-257ENST00000505534 CRYBG1Q9Y4K1 1723 aa24.87■■□□□ 1.57
DDR1-257ENST00000505534 PSDA5PKW4 1024 aaPredicted RBP24.87■■□□□ 1.57
DDR1-257ENST00000505534 HRCP23327 699 aa24.86■■□□□ 1.57
DDR1-257ENST00000505534 NGDNQ8NEJ9 315 aaKnown RBP24.86■■□□□ 1.57
DDR1-257ENST00000505534 PAK3O75914 559 aaPredicted RBP24.84■■□□□ 1.57
DDR1-257ENST00000505534 EN1Q05925 392 aaPredicted RBP24.84■■□□□ 1.57
DDR1-257ENST00000505534 THSD7AQ9UPZ6 1657 aa24.83■■□□□ 1.57
DDR1-257ENST00000505534 STAC3Q96MF2 364 aa24.83■■□□□ 1.57
DDR1-257ENST00000505534 PRDM11Q9NQV5 511 aa24.83■■□□□ 1.57
DDR1-257ENST00000505534 KDM2AQ9Y2K7 1162 aa24.83■■□□□ 1.57
DDR1-257ENST00000505534 ITSN1Q15811 1721 aa24.82■■□□□ 1.56
DDR1-257ENST00000505534 FAM182BQ5T319 152 aa24.82■■□□□ 1.56
DDR1-257ENST00000505534 DCAF11Q8TEB1 546 aa24.82■■□□□ 1.56
DDR1-257ENST00000505534 RAB3GAP2Q9H2M9 1393 aa24.8■■□□□ 1.56
DDR1-257ENST00000505534 DISP2A7MBM2 1401 aa24.8■■□□□ 1.56
DDR1-257ENST00000505534 TNS1Q9HBL0 1735 aaKnown RBP24.79■■□□□ 1.56
DDR1-257ENST00000505534 SPATA31A1Q5TZJ5 1347 aa24.78■■□□□ 1.56
DDR1-257ENST00000505534 ARHGEF28Q8N1W1 1705 aaKnown RBP24.77■■□□□ 1.56
DDR1-257ENST00000505534 NUDT16Q96DE0 195 aaKnown RBP24.76■■□□□ 1.55
DDR1-257ENST00000505534 KIAA0232Q92628 1395 aa24.76■■□□□ 1.55
DDR1-257ENST00000505534 R3HDM1Q15032 1099 aaKnown RBP24.75■■□□□ 1.55
DDR1-257ENST00000505534 FAM196AQ6ZSG2 479 aa24.75■■□□□ 1.55
DDR1-257ENST00000505534 ATP7BP35670 1465 aa24.75■■□□□ 1.55
DDR1-257ENST00000505534 PHRF1Q9P1Y6 1649 aaKnown RBP24.75■■□□□ 1.55
DDR1-257ENST00000505534 CHRNA2Q15822 529 aa24.74■■□□□ 1.55
DDR1-257ENST00000505534 EZH2Q15910 746 aaKnown RBP24.74■■□□□ 1.55
DDR1-257ENST00000505534 STRN4Q9NRL3 753 aa24.73■■□□□ 1.55
DDR1-257ENST00000505534 TRIM37O94972 964 aa24.71■■□□□ 1.55
DDR1-257ENST00000505534 ZC3H6P61129 1189 aaKnown RBP24.71■■□□□ 1.55
DDR1-257ENST00000505534 CAMKK2Q96RR4 588 aa24.71■■□□□ 1.55
DDR1-257ENST00000505534 CDK19Q9BWU1 502 aa24.69■■□□□ 1.54
DDR1-257ENST00000505534 POLR3AO14802 1390 aaPredicted RBP24.68■■□□□ 1.54
DDR1-257ENST00000505534 PARD3Q8TEW0 1356 aa24.68■■□□□ 1.54
DDR1-257ENST00000505534 EVA1CP58658 441 aa24.68■■□□□ 1.54
DDR1-257ENST00000505534 BARGINQ6ZT62 677 aa24.68■■□□□ 1.54
DDR1-257ENST00000505534 APBA3O96018 575 aa24.67■■□□□ 1.54
DDR1-257ENST00000505534 NBPF8Q3BBV2 869 aa24.67■■□□□ 1.54
DDR1-257ENST00000505534 NUTM2GQ5VZR2 741 aa24.67■■□□□ 1.54
DDR1-257ENST00000505534 CCDC61Q9Y6R9 512 aa24.67■■□□□ 1.54
DDR1-257ENST00000505534 ACEP12821 1306 aa24.66■■□□□ 1.54
DDR1-257ENST00000505534 TOPAZ1Q8N9V7 1692 aa24.66■■□□□ 1.54
DDR1-257ENST00000505534 USP35Q9P2H5 1018 aa24.66■■□□□ 1.54
DDR1-257ENST00000505534 PDE3BQ13370 1112 aa24.65■■□□□ 1.54
DDR1-257ENST00000505534 SSH2Q76I76 1423 aa24.65■■□□□ 1.54
DDR1-257ENST00000505534 PLEKHG3A1L390 1219 aa24.64■■□□□ 1.54
DDR1-257ENST00000505534 ABTB2Q8N961 1025 aa24.63■■□□□ 1.53
DDR1-257ENST00000505534 NRKQ7Z2Y5 1582 aa24.62■■□□□ 1.53
DDR1-257ENST00000505534 CAMTA1Q9Y6Y1 1673 aa24.62■■□□□ 1.53
DDR1-257ENST00000505534 TCP11L2Q8N4U5 519 aa24.61■■□□□ 1.53
DDR1-257ENST00000505534 CPDO75976 1380 aa24.61■■□□□ 1.53
DDR1-257ENST00000505534 RREB1Q92766 1687 aa24.61■■□□□ 1.53
DDR1-257ENST00000505534 KIAA1210Q9ULL0 1709 aa24.61■■□□□ 1.53
DDR1-257ENST00000505534 LARP1Q6PKG0 1096 aaKnown RBP24.6■■□□□ 1.53
DDR1-257ENST00000505534 LMO7Q8WWI1 1683 aa24.59■■□□□ 1.53
DDR1-257ENST00000505534 THRAP3Q9Y2W1 955 aaKnown RBP24.59■■□□□ 1.53
DDR1-257ENST00000505534 USP19O94966 1318 aa24.59■■□□□ 1.53
DDR1-257ENST00000505534 NBPF14Q5TI25 921 aa24.58■■□□□ 1.53
DDR1-257ENST00000505534 NUP188Q5SRE5 1749 aa24.58■■□□□ 1.52
DDR1-257ENST00000505534 NLRP13Q86W25 1043 aa24.57■■□□□ 1.52
DDR1-257ENST00000505534 GCP02774 474 aa24.55■■□□□ 1.52
DDR1-257ENST00000505534 C11orf95C9JLR9 678 aaPredicted RBP24.54■■□□□ 1.52
DDR1-257ENST00000505534 PARP4Q9UKK3 1724 aaKnown RBP24.54■■□□□ 1.52
DDR1-257ENST00000505534 BRD4O60885 1362 aaPredicted RBP24.53■■□□□ 1.52
DDR1-257ENST00000505534 SRPK2P78362 688 aaKnown RBP24.51■■□□□ 1.51
DDR1-257ENST00000505534 PPIP5K1Q6PFW1 1433 aa24.51■■□□□ 1.51
DDR1-257ENST00000505534 COL5A2P05997 1499 aaPredicted RBP24.51■■□□□ 1.51
DDR1-257ENST00000505534 NBPF1Q3BBV0 1214 aa24.5■■□□□ 1.51
DDR1-257ENST00000505534 CRB1P82279 1406 aa24.48■■□□□ 1.51
DDR1-257ENST00000505534 SBF2Q86WG5 1849 aa24.48■■□□□ 1.51
DDR1-257ENST00000505534 CENPJQ9HC77 1338 aaPredicted RBP24.47■■□□□ 1.51
DDR1-257ENST00000505534 CABP2Q9NPB3 220 aa24.47■■□□□ 1.51
DDR1-257ENST00000505534 SPON1Q9HCB6 807 aa24.46■■□□□ 1.51
DDR1-257ENST00000505534 OVOS2A0A0G2JMS6 1433 aa24.45■■□□□ 1.51
DDR1-257ENST00000505534 OVOS2A0A0J9YW53 1432 aa24.45■■□□□ 1.51
DDR1-257ENST00000505534 OVOS2Q6IE36 1432 aa24.45■■□□□ 1.51
DDR1-257ENST00000505534 PEAK1Q9H792 1746 aa24.45■■□□□ 1.5
DDR1-257ENST00000505534 RGPD3A6NKT7 1758 aaPredicted RBP24.44■■□□□ 1.5
DDR1-257ENST00000505534 RGPD4Q7Z3J3 1758 aa24.44■■□□□ 1.5
DDR1-257ENST00000505534 AATKQ6ZMQ8 1374 aa24.44■■□□□ 1.5
DDR1-257ENST00000505534 KCNQ2O43526 872 aa24.44■■□□□ 1.5
DDR1-257ENST00000505534 NLRP6P59044 892 aa24.44■■□□□ 1.5
DDR1-257ENST00000505534 PLSCR1O15162 318 aa24.43■■□□□ 1.5
DDR1-257ENST00000505534 PPP1R1BQ9UD71 204 aaPredicted RBP24.43■■□□□ 1.5
DDR1-257ENST00000505534 QRICH2Q9H0J4 1663 aa24.43■■□□□ 1.5
DDR1-257ENST00000505534 USP6P35125 1406 aa24.43■■□□□ 1.5
DDR1-257ENST00000505534 ZBTB7CA1YPR0 619 aa24.42■■□□□ 1.5
DDR1-257ENST00000505534 YY1P25490 414 aa24.42■■□□□ 1.5
DDR1-257ENST00000505534 CABP1Q9NZU7 370 aa24.42■■□□□ 1.5
DDR1-257ENST00000505534 SLIT3O75094 1523 aa24.41■■□□□ 1.5
DDR1-257ENST00000505534 DDB1Q16531 1140 aa24.41■■□□□ 1.5
DDR1-257ENST00000505534 LRRC37A3O60309 1634 aa24.4■■□□□ 1.5
DDR1-257ENST00000505534 COL18A1P39060 1754 aa24.4■■□□□ 1.5
DDR1-257ENST00000505534 TOM1L2Q6ZVM7 507 aa24.39■■□□□ 1.49
DDR1-257ENST00000505534 NINLQ9Y2I6 1382 aa24.39■■□□□ 1.49
DDR1-257ENST00000505534 DCAF8L1A6NGE4 600 aa24.38■■□□□ 1.49
DDR1-257ENST00000505534 BCL11BQ9C0K0 894 aaPredicted RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms