RNA–Protein interactions for RNA: ENST00000504458.1

SERF1A-204, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4 BASIC

Gene SERF1A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-204ENST00000504458 RIMS1Q86UR5 1692 aaKnown RBP8.58□□□□□ -1.04
SERF1A-204ENST00000504458 ABCC5O15440 1437 aa8.57□□□□□ -1.04
SERF1A-204ENST00000504458 YEATS2Q9ULM3 1422 aa8.57□□□□□ -1.04
SERF1A-204ENST00000504458 ITSN2Q9NZM3 1697 aa8.57□□□□□ -1.04
SERF1A-204ENST00000504458 GPIHBP1Q8IV16 184 aa8.57□□□□□ -1.04
SERF1A-204ENST00000504458 HDGFP51858 240 aaKnown RBP8.56□□□□□ -1.04
SERF1A-204ENST00000504458 NUDT18Q6ZVK8 323 aa8.56□□□□□ -1.04
SERF1A-204ENST00000504458 RRP7BPQ9NSQ0 103 aa8.56□□□□□ -1.04
SERF1A-204ENST00000504458 BCORL1Q5H9F3 1711 aa8.56□□□□□ -1.04
SERF1A-204ENST00000504458 ANKRD30BQ9BXX2 1392 aa8.56□□□□□ -1.04
SERF1A-204ENST00000504458 ADGRL2O95490 1459 aa8.56□□□□□ -1.04
SERF1A-204ENST00000504458 RPRD2Q5VT52 1461 aaKnown RBP8.56□□□□□ -1.04
SERF1A-204ENST00000504458 SOWAHBA6NEL2 793 aa8.55□□□□□ -1.04
SERF1A-204ENST00000504458 EIF4G2P78344 907 aaKnown RBP eCLIP8.55□□□□□ -1.04
SERF1A-204ENST00000504458 EFCAB2Q5VUJ9 269 aa8.55□□□□□ -1.04
SERF1A-204ENST00000504458 LRCH3Q96II8 777 aa8.55□□□□□ -1.04
SERF1A-204ENST00000504458 UHRF1BP1Q6BDS2 1440 aa8.54□□□□□ -1.04
SERF1A-204ENST00000504458 SCAPERQ9BY12 1400 aa8.54□□□□□ -1.04
SERF1A-204ENST00000504458 SMAPO00193 183 aa8.54□□□□□ -1.04
SERF1A-204ENST00000504458 GNPATO15228 680 aa8.54□□□□□ -1.04
SERF1A-204ENST00000504458 PTPN5P54829 565 aa8.54□□□□□ -1.04
SERF1A-204ENST00000504458 PIP4K2BP78356 416 aa8.54□□□□□ -1.04
SERF1A-204ENST00000504458 RBM46Q8TBY0 533 aaKnown RBP8.54□□□□□ -1.04
SERF1A-204ENST00000504458 TRIM52Q96A61 297 aa8.54□□□□□ -1.04
SERF1A-204ENST00000504458 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.54□□□□□ -1.04
SERF1A-204ENST00000504458 ADGBQ8N7X0 1667 aa8.53□□□□□ -1.04
SERF1A-204ENST00000504458 CHIC2Q9UKJ5 165 aa8.53□□□□□ -1.04
SERF1A-204ENST00000504458 ZFYVE16Q7Z3T8 1539 aa8.53□□□□□ -1.04
SERF1A-204ENST00000504458 SPATA31D1Q6ZQQ2 1576 aa8.52□□□□□ -1.04
SERF1A-204ENST00000504458 ABCA9Q8IUA7 1624 aa8.52□□□□□ -1.05
SERF1A-204ENST00000504458 GPR37O15354 613 aa8.52□□□□□ -1.05
SERF1A-204ENST00000504458 HSPA5P11021 654 aaKnown RBP8.52□□□□□ -1.05
SERF1A-204ENST00000504458 NYAP1Q6ZVC0 841 aa8.52□□□□□ -1.05
SERF1A-204ENST00000504458 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.52□□□□□ -1.05
SERF1A-204ENST00000504458 AFAP1Q8N556 730 aa8.52□□□□□ -1.05
SERF1A-204ENST00000504458 EYA1Q99502 592 aa8.52□□□□□ -1.05
SERF1A-204ENST00000504458 GPATCH8Q9UKJ3 1502 aaKnown RBP8.52□□□□□ -1.05
SERF1A-204ENST00000504458 NCOA1Q15788 1441 aa8.52□□□□□ -1.05
SERF1A-204ENST00000504458 CAMSAP2Q08AD1 1489 aa8.51□□□□□ -1.05
SERF1A-204ENST00000504458 SHANK2Q9UPX8 1470 aa8.51□□□□□ -1.05
SERF1A-204ENST00000504458 C3orf80F5H4A9 247 aa8.51□□□□□ -1.05
SERF1A-204ENST00000504458 OATP04181 439 aa8.51□□□□□ -1.05
SERF1A-204ENST00000504458 NEFLP07196 543 aa8.51□□□□□ -1.05
SERF1A-204ENST00000504458 SLC4A3P48751 1232 aa8.51□□□□□ -1.05
SERF1A-204ENST00000504458 BCAMP50895 628 aa8.51□□□□□ -1.05
SERF1A-204ENST00000504458 ADGRG1Q9Y653 693 aa8.51□□□□□ -1.05
SERF1A-204ENST00000504458 CNTLNQ9NXG0 1405 aa8.51□□□□□ -1.05
SERF1A-204ENST00000504458 ATP10AO60312 1499 aa8.51□□□□□ -1.05
SERF1A-204ENST00000504458 ANKRD30AQ9BXX3 1397 aa8.5□□□□□ -1.05
SERF1A-204ENST00000504458 CROCC2H7BZ55 1655 aa8.5□□□□□ -1.05
SERF1A-204ENST00000504458 ERICH6BQ5W0A0 696 aa8.5□□□□□ -1.05
SERF1A-204ENST00000504458 SAMD7Q7Z3H4 446 aa8.5□□□□□ -1.05
SERF1A-204ENST00000504458 NECTIN2Q92692 538 aa8.5□□□□□ -1.05
SERF1A-204ENST00000504458 L3MBTL2Q969R5 705 aa8.5□□□□□ -1.05
SERF1A-204ENST00000504458 CFDP1Q9UEE9 299 aaPredicted RBP8.5□□□□□ -1.05
SERF1A-204ENST00000504458 WASHC2AQ641Q2 1341 aa8.5□□□□□ -1.05
SERF1A-204ENST00000504458 ARHGEF40Q8TER5 1519 aa8.49□□□□□ -1.05
SERF1A-204ENST00000504458 POLR1AO95602 1720 aaPredicted RBP8.49□□□□□ -1.05
SERF1A-204ENST00000504458 SPATA31E1Q6ZUB1 1445 aa8.49□□□□□ -1.05
SERF1A-204ENST00000504458 KIAA1107Q9UPP5 1409 aa8.49□□□□□ -1.05
SERF1A-204ENST00000504458 DNAJB2P25686 324 aa8.49□□□□□ -1.05
SERF1A-204ENST00000504458 TSR3Q9UJK0 312 aaKnown RBP8.49□□□□□ -1.05
SERF1A-204ENST00000504458 CCDC7Q96M83 1385 aa8.48□□□□□ -1.05
SERF1A-204ENST00000504458 FRMPD1Q5SYB0 1578 aa8.48□□□□□ -1.05
SERF1A-204ENST00000504458 C9orf84Q5VXU9 1444 aa8.48□□□□□ -1.05
SERF1A-204ENST00000504458 LMOD2Q6P5Q4 547 aa8.48□□□□□ -1.05
SERF1A-204ENST00000504458 ZNF777Q9ULD5 760 aaPredicted RBP8.48□□□□□ -1.05
SERF1A-204ENST00000504458 PZPP20742 1482 aa8.48□□□□□ -1.05
SERF1A-204ENST00000504458 MAGI2Q86UL8 1455 aa8.48□□□□□ -1.05
SERF1A-204ENST00000504458 KDM5DQ9BY66 1539 aa8.48□□□□□ -1.05
SERF1A-204ENST00000504458 ZNF335Q9H4Z2 1342 aaPredicted RBP8.48□□□□□ -1.05
SERF1A-204ENST00000504458 MBD5Q9P267 1494 aa8.47□□□□□ -1.05
SERF1A-204ENST00000504458 PPP4CP60510 307 aa8.47□□□□□ -1.05
SERF1A-204ENST00000504458 RSPH4AQ5TD94 716 aa8.47□□□□□ -1.05
SERF1A-204ENST00000504458 SLF2Q8IX21 1173 aa8.47□□□□□ -1.05
SERF1A-204ENST00000504458 HIRIP3Q9BW71 556 aaPredicted RBP8.47□□□□□ -1.05
SERF1A-204ENST00000504458 HPS5Q9UPZ3 1129 aa8.47□□□□□ -1.05
SERF1A-204ENST00000504458 KIF14Q15058 1648 aa8.47□□□□□ -1.05
SERF1A-204ENST00000504458 PTPRTO14522 1441 aa8.46□□□□□ -1.05
SERF1A-204ENST00000504458 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.46□□□□□ -1.06
SERF1A-204ENST00000504458 TOM1O60784 492 aa8.46□□□□□ -1.06
SERF1A-204ENST00000504458 HSPA1LP34931 641 aa8.46□□□□□ -1.06
SERF1A-204ENST00000504458 PXYLP1Q8TE99 480 aa8.46□□□□□ -1.06
SERF1A-204ENST00000504458 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
SERF1A-204ENST00000504458 ARHGEF5Q12774 1597 aa8.46□□□□□ -1.06
SERF1A-204ENST00000504458 PLCH2O75038 1416 aa8.46□□□□□ -1.06
SERF1A-204ENST00000504458 ARHGEF12Q9NZN5 1544 aa8.45□□□□□ -1.06
SERF1A-204ENST00000504458 RCCD1A6NED2 376 aa8.45□□□□□ -1.06
SERF1A-204ENST00000504458 FECHP22830 423 aa8.45□□□□□ -1.06
SERF1A-204ENST00000504458 SWT1Q5T5J6 900 aaKnown RBP8.45□□□□□ -1.06
SERF1A-204ENST00000504458 METTL3Q86U44 580 aaKnown RBP8.45□□□□□ -1.06
SERF1A-204ENST00000504458 ZNF644Q9H582 1327 aaPredicted RBP8.45□□□□□ -1.06
SERF1A-204ENST00000504458 ANKRD50Q9ULJ7 1429 aa8.45□□□□□ -1.06
SERF1A-204ENST00000504458 RNF40O75150 1001 aa8.44□□□□□ -1.06
SERF1A-204ENST00000504458 FAM161AQ3B820 660 aa8.44□□□□□ -1.06
SERF1A-204ENST00000504458 TMEM134Q9H6X4 195 aa8.44□□□□□ -1.06
SERF1A-204ENST00000504458 ROCK2O75116 1388 aaKnown RBP8.44□□□□□ -1.06
SERF1A-204ENST00000504458 TRAPPC8Q9Y2L5 1435 aa8.44□□□□□ -1.06
SERF1A-204ENST00000504458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
SERF1A-204ENST00000504458 CDC42BPAQ5VT25 1732 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms