RNA–Protein interactions for RNA: ENST00000504095.1

KDM3B-202, Transcript of lysine demethylase 3B, humanhuman

TSL 3

Gene KDM3B, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-202ENST00000504095 ANKRD13DQ6ZTN6 518 aa12.36□□□□□ -0.43
KDM3B-202ENST00000504095 ANKLE2Q86XL3 938 aa12.36□□□□□ -0.43
KDM3B-202ENST00000504095 PLPP6Q8IY26 295 aa12.36□□□□□ -0.43
KDM3B-202ENST00000504095 ZFYVE9O95405 1425 aa12.36□□□□□ -0.43
KDM3B-202ENST00000504095 MED14O60244 1454 aa12.35□□□□□ -0.43
KDM3B-202ENST00000504095 RIMS2Q9UQ26 1411 aa12.35□□□□□ -0.43
KDM3B-202ENST00000504095 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
KDM3B-202ENST00000504095 PPLO60437 1756 aa12.34□□□□□ -0.43
KDM3B-202ENST00000504095 NEXMIFQ5QGS0 1516 aa12.34□□□□□ -0.43
KDM3B-202ENST00000504095 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
KDM3B-202ENST00000504095 FOXK1P85037 733 aa12.33□□□□□ -0.44
KDM3B-202ENST00000504095 DSG2Q14126 1118 aa12.33□□□□□ -0.44
KDM3B-202ENST00000504095 TXNDC2Q86VQ3 553 aa12.33□□□□□ -0.44
KDM3B-202ENST00000504095 RNF166Q96A37 237 aaPredicted RBP12.33□□□□□ -0.44
KDM3B-202ENST00000504095 EID1Q9Y6B2 187 aa12.33□□□□□ -0.44
KDM3B-202ENST00000504095 NPHP4O75161 1426 aaPredicted RBP12.33□□□□□ -0.44
KDM3B-202ENST00000504095 SPATA31E1Q6ZUB1 1445 aa12.33□□□□□ -0.44
KDM3B-202ENST00000504095 IFT172Q9UG01 1749 aa12.33□□□□□ -0.44
KDM3B-202ENST00000504095 ZNF326Q5BKZ1 582 aaKnown RBP12.32□□□□□ -0.44
KDM3B-202ENST00000504095 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
KDM3B-202ENST00000504095 RYDENQ9NUL5 291 aaKnown RBP12.3□□□□□ -0.44
KDM3B-202ENST00000504095 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
KDM3B-202ENST00000504095 PPP1R15AO75807 674 aaPredicted RBP12.29□□□□□ -0.44
KDM3B-202ENST00000504095 LSM11P83369 360 aaKnown RBP eCLIP12.29□□□□□ -0.44
KDM3B-202ENST00000504095 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.29□□□□□ -0.44
KDM3B-202ENST00000504095 NRXN3Q9Y4C0 1643 aa12.29□□□□□ -0.44
KDM3B-202ENST00000504095 PLEKHG1Q9ULL1 1385 aa12.29□□□□□ -0.44
KDM3B-202ENST00000504095 HDGFP51858 240 aaKnown RBP12.28□□□□□ -0.44
KDM3B-202ENST00000504095 RGL3Q3MIN7 710 aa12.28□□□□□ -0.44
KDM3B-202ENST00000504095 PTCD2Q8WV60 388 aaKnown RBP12.28□□□□□ -0.44
KDM3B-202ENST00000504095 STRCP1A6NGW2 1772 aa12.28□□□□□ -0.44
KDM3B-202ENST00000504095 RPGRIP1LQ68CZ1 1315 aa12.27□□□□□ -0.45
KDM3B-202ENST00000504095 POTEEQ6S8J3 1075 aa12.26□□□□□ -0.45
KDM3B-202ENST00000504095 SETBP1Q9Y6X0 1596 aa12.26□□□□□ -0.45
KDM3B-202ENST00000504095 SLC26A8Q96RN1 970 aa12.25□□□□□ -0.45
KDM3B-202ENST00000504095 ZNF335Q9H4Z2 1342 aaPredicted RBP12.25□□□□□ -0.45
KDM3B-202ENST00000504095 ADAMTS13Q76LX8 1427 aa12.25□□□□□ -0.45
KDM3B-202ENST00000504095 SETD1AO15047 1707 aaKnown RBP12.25□□□□□ -0.45
KDM3B-202ENST00000504095 CHD2O14647 1828 aaKnown RBP12.24□□□□□ -0.45
KDM3B-202ENST00000504095 DIP2AQ14689 1571 aa12.24□□□□□ -0.45
KDM3B-202ENST00000504095 LTBP4Q8N2S1 1624 aa12.24□□□□□ -0.45
KDM3B-202ENST00000504095 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.45
KDM3B-202ENST00000504095 BCANQ96GW7 911 aa12.24□□□□□ -0.45
KDM3B-202ENST00000504095 SIN3AQ96ST3 1273 aa12.24□□□□□ -0.45
KDM3B-202ENST00000504095 ADGRF5Q8IZF2 1346 aa12.23□□□□□ -0.45
KDM3B-202ENST00000504095 PBX2P40425 430 aa12.23□□□□□ -0.45
KDM3B-202ENST00000504095 MYOM2P54296 1465 aa12.22□□□□□ -0.45
KDM3B-202ENST00000504095 NRXN1Q9ULB1 1477 aa12.21□□□□□ -0.45
KDM3B-202ENST00000504095 GTPBP6O43824 516 aaPredicted RBP12.21□□□□□ -0.45
KDM3B-202ENST00000504095 TBC1D12O60347 775 aa12.21□□□□□ -0.45
KDM3B-202ENST00000504095 CRISPLD2Q9H0B8 497 aa12.21□□□□□ -0.45
KDM3B-202ENST00000504095 TBX22Q9Y458 520 aa12.21□□□□□ -0.45
KDM3B-202ENST00000504095 ALKQ9UM73 1620 aa12.21□□□□□ -0.46
KDM3B-202ENST00000504095 PTGER2P43116 358 aa12.2□□□□□ -0.46
KDM3B-202ENST00000504095 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
KDM3B-202ENST00000504095 NWD1Q149M9 1564 aa12.2□□□□□ -0.46
KDM3B-202ENST00000504095 PIK3C2GO75747 1445 aa12.2□□□□□ -0.46
KDM3B-202ENST00000504095 XIRP1Q702N8 1843 aaKnown RBP12.19□□□□□ -0.46
KDM3B-202ENST00000504095 PPP1R15BQ5SWA1 713 aa12.19□□□□□ -0.46
KDM3B-202ENST00000504095 DCAF11Q8TEB1 546 aa12.19□□□□□ -0.46
KDM3B-202ENST00000504095 CPS1P31327 1500 aa12.19□□□□□ -0.46
KDM3B-202ENST00000504095 METP08581 1390 aa12.18□□□□□ -0.46
KDM3B-202ENST00000504095 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
KDM3B-202ENST00000504095 KDM2AQ9Y2K7 1162 aa12.18□□□□□ -0.46
KDM3B-202ENST00000504095 PTPRUQ92729 1446 aa12.18□□□□□ -0.46
KDM3B-202ENST00000504095 LAMC1P11047 1609 aa12.18□□□□□ -0.46
KDM3B-202ENST00000504095 XRN1Q8IZH2 1706 aaKnown RBP12.17□□□□□ -0.46
KDM3B-202ENST00000504095 KCNA6P17658 529 aa12.17□□□□□ -0.46
KDM3B-202ENST00000504095 PIK3R4Q99570 1358 aa12.17□□□□□ -0.46
KDM3B-202ENST00000504095 ASXL1Q8IXJ9 1541 aa12.16□□□□□ -0.46
KDM3B-202ENST00000504095 ARHGAP33O14559 1287 aa12.16□□□□□ -0.46
KDM3B-202ENST00000504095 L3MBTL2Q969R5 705 aa12.16□□□□□ -0.46
KDM3B-202ENST00000504095 LRRC7Q96NW7 1537 aa12.16□□□□□ -0.46
KDM3B-202ENST00000504095 PDE4AP27815 886 aa12.15□□□□□ -0.46
KDM3B-202ENST00000504095 PSEN2P49810 448 aa12.15□□□□□ -0.46
KDM3B-202ENST00000504095 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.46
KDM3B-202ENST00000504095 CERKQ8TCT0 537 aa12.15□□□□□ -0.46
KDM3B-202ENST00000504095 OXER1Q8TDS5 423 aa12.15□□□□□ -0.46
KDM3B-202ENST00000504095 STAC3Q96MF2 364 aa12.15□□□□□ -0.46
KDM3B-202ENST00000504095 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
KDM3B-202ENST00000504095 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
KDM3B-202ENST00000504095 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
KDM3B-202ENST00000504095 PRAG1Q86YV5 1406 aa12.13□□□□□ -0.47
KDM3B-202ENST00000504095 CFAP70Q5T0N1 1121 aa12.13□□□□□ -0.47
KDM3B-202ENST00000504095 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
KDM3B-202ENST00000504095 LARP6Q9BRS8 491 aaKnown RBP12.13□□□□□ -0.47
KDM3B-202ENST00000504095 C14orf93Q9H972 538 aaKnown RBP12.13□□□□□ -0.47
KDM3B-202ENST00000504095 AMOTL2Q9Y2J4 779 aa12.13□□□□□ -0.47
KDM3B-202ENST00000504095 KNDC1Q76NI1 1749 aa12.13□□□□□ -0.47
KDM3B-202ENST00000504095 TONSLQ96HA7 1378 aa12.13□□□□□ -0.47
KDM3B-202ENST00000504095 DMRTA1Q5VZB9 504 aa12.12□□□□□ -0.47
KDM3B-202ENST00000504095 ADGRD1Q6QNK2 874 aa12.12□□□□□ -0.47
KDM3B-202ENST00000504095 IQSEC2Q5JU85 1478 aa12.12□□□□□ -0.47
KDM3B-202ENST00000504095 ADGRB1O14514 1584 aa12.12□□□□□ -0.47
KDM3B-202ENST00000504095 TMEM132EQ6IEE7 984 aa12.11□□□□□ -0.47
KDM3B-202ENST00000504095 TRPM1Q7Z4N2 1603 aa12.11□□□□□ -0.47
KDM3B-202ENST00000504095 TMEM94Q12767 1356 aa12.1□□□□□ -0.47
KDM3B-202ENST00000504095 PROSER2Q86WR7 435 aaPredicted RBP12.1□□□□□ -0.47
KDM3B-202ENST00000504095 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
KDM3B-202ENST00000504095 LRPPRCP42704 1394 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms