RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 BAG6P46379 1132 aa20.23■□□□□ 0.83
DDR1-247ENST00000502955 SPATA31A5Q5VU36 1347 aa20.23■□□□□ 0.83
DDR1-247ENST00000502955 SPATA31A7Q8IWB4 1347 aa20.23■□□□□ 0.83
DDR1-247ENST00000502955 MINK1Q8N4C8 1332 aaPredicted RBP20.23■□□□□ 0.83
DDR1-247ENST00000502955 THSD7AQ9UPZ6 1657 aa20.22■□□□□ 0.83
DDR1-247ENST00000502955 RGPD1P0DJD0 1748 aa20.22■□□□□ 0.83
DDR1-247ENST00000502955 A0A0G2JS52 829 aa20.21■□□□□ 0.83
DDR1-247ENST00000502955 MYT1Q01538 1121 aa20.21■□□□□ 0.83
DDR1-247ENST00000502955 ITSN1Q15811 1721 aa20.21■□□□□ 0.83
DDR1-247ENST00000502955 DCAF11Q8TEB1 546 aa20.2■□□□□ 0.82
DDR1-247ENST00000502955 DISP2A7MBM2 1401 aa20.19■□□□□ 0.82
DDR1-247ENST00000502955 ARHGEF28Q8N1W1 1705 aaKnown RBP20.19■□□□□ 0.82
DDR1-247ENST00000502955 ATP7BP35670 1465 aa20.19■□□□□ 0.82
DDR1-247ENST00000502955 NGDNQ8NEJ9 315 aaKnown RBP20.19■□□□□ 0.82
DDR1-247ENST00000502955 KDM2AQ9Y2K7 1162 aa20.17■□□□□ 0.82
DDR1-247ENST00000502955 TNS1Q9HBL0 1735 aaKnown RBP20.16■□□□□ 0.82
DDR1-247ENST00000502955 HRCP23327 699 aa20.16■□□□□ 0.82
DDR1-247ENST00000502955 PRDM11Q9NQV5 511 aa20.16■□□□□ 0.82
DDR1-247ENST00000502955 PHRF1Q9P1Y6 1649 aaKnown RBP20.16■□□□□ 0.82
DDR1-247ENST00000502955 PAK3O75914 559 aaPredicted RBP20.15■□□□□ 0.82
DDR1-247ENST00000502955 SPATA31A1Q5TZJ5 1347 aa20.14■□□□□ 0.81
DDR1-247ENST00000502955 NUDT16Q96DE0 195 aaKnown RBP20.14■□□□□ 0.81
DDR1-247ENST00000502955 POLR3AO14802 1390 aaPredicted RBP20.13■□□□□ 0.81
DDR1-247ENST00000502955 KIAA0232Q92628 1395 aa20.13■□□□□ 0.81
DDR1-247ENST00000502955 PSDA5PKW4 1024 aaPredicted RBP20.13■□□□□ 0.81
DDR1-247ENST00000502955 EN1Q05925 392 aaPredicted RBP20.13■□□□□ 0.81
DDR1-247ENST00000502955 TOPAZ1Q8N9V7 1692 aa20.13■□□□□ 0.81
DDR1-247ENST00000502955 FAM182BQ5T319 152 aa20.12■□□□□ 0.81
DDR1-247ENST00000502955 FAM196AQ6ZSG2 479 aa20.09■□□□□ 0.81
DDR1-247ENST00000502955 KIAA1210Q9ULL0 1709 aa20.09■□□□□ 0.81
DDR1-247ENST00000502955 CDK19Q9BWU1 502 aa20.08■□□□□ 0.81
DDR1-247ENST00000502955 PARD3Q8TEW0 1356 aa20.08■□□□□ 0.8
DDR1-247ENST00000502955 PLEKHG3A1L390 1219 aa20.07■□□□□ 0.8
DDR1-247ENST00000502955 CHRNA2Q15822 529 aa20.07■□□□□ 0.8
DDR1-247ENST00000502955 BARGINQ6ZT62 677 aa20.07■□□□□ 0.8
DDR1-247ENST00000502955 CAMKK2Q96RR4 588 aa20.07■□□□□ 0.8
DDR1-247ENST00000502955 CCDC61Q9Y6R9 512 aa20.07■□□□□ 0.8
DDR1-247ENST00000502955 NRKQ7Z2Y5 1582 aa20.07■□□□□ 0.8
DDR1-247ENST00000502955 ACEP12821 1306 aa20.06■□□□□ 0.8
DDR1-247ENST00000502955 NBPF8Q3BBV2 869 aa20.06■□□□□ 0.8
DDR1-247ENST00000502955 CPDO75976 1380 aa20.06■□□□□ 0.8
DDR1-247ENST00000502955 SSH2Q76I76 1423 aa20.05■□□□□ 0.8
DDR1-247ENST00000502955 ZC3H6P61129 1189 aaKnown RBP20.05■□□□□ 0.8
DDR1-247ENST00000502955 R3HDM1Q15032 1099 aaKnown RBP20.05■□□□□ 0.8
DDR1-247ENST00000502955 EZH2Q15910 746 aaKnown RBP20.05■□□□□ 0.8
DDR1-247ENST00000502955 STRN4Q9NRL3 753 aa20.05■□□□□ 0.8
DDR1-247ENST00000502955 LMO7Q8WWI1 1683 aa20.05■□□□□ 0.8
DDR1-247ENST00000502955 CAMTA1Q9Y6Y1 1673 aa20.03■□□□□ 0.8
DDR1-247ENST00000502955 USP19O94966 1318 aa20.03■□□□□ 0.8
DDR1-247ENST00000502955 TRIM37O94972 964 aa20.03■□□□□ 0.8
DDR1-247ENST00000502955 RREB1Q92766 1687 aa20.02■□□□□ 0.8
DDR1-247ENST00000502955 NUTM2GQ5VZR2 741 aa20.01■□□□□ 0.79
DDR1-247ENST00000502955 BRD4O60885 1362 aaPredicted RBP20■□□□□ 0.79
DDR1-247ENST00000502955 APBA3O96018 575 aa20■□□□□ 0.79
DDR1-247ENST00000502955 EVA1CP58658 441 aa20■□□□□ 0.79
DDR1-247ENST00000502955 ABTB2Q8N961 1025 aa20■□□□□ 0.79
DDR1-247ENST00000502955 LARP1Q6PKG0 1096 aaKnown RBP19.99■□□□□ 0.79
DDR1-247ENST00000502955 TCP11L2Q8N4U5 519 aa19.99■□□□□ 0.79
DDR1-247ENST00000502955 USP35Q9P2H5 1018 aa19.99■□□□□ 0.79
DDR1-247ENST00000502955 THRAP3Q9Y2W1 955 aaKnown RBP19.99■□□□□ 0.79
DDR1-247ENST00000502955 PDE3BQ13370 1112 aa19.98■□□□□ 0.79
DDR1-247ENST00000502955 NUP188Q5SRE5 1749 aa19.98■□□□□ 0.79
DDR1-247ENST00000502955 PARP4Q9UKK3 1724 aaKnown RBP19.98■□□□□ 0.79
DDR1-247ENST00000502955 NLRP13Q86W25 1043 aa19.97■□□□□ 0.79
DDR1-247ENST00000502955 PPIP5K1Q6PFW1 1433 aa19.96■□□□□ 0.79
DDR1-247ENST00000502955 GCP02774 474 aa19.96■□□□□ 0.79
DDR1-247ENST00000502955 COL5A2P05997 1499 aaPredicted RBP19.96■□□□□ 0.79
DDR1-247ENST00000502955 C11orf95C9JLR9 678 aaPredicted RBP19.95■□□□□ 0.78
DDR1-247ENST00000502955 NBPF1Q3BBV0 1214 aa19.95■□□□□ 0.78
DDR1-247ENST00000502955 CENPJQ9HC77 1338 aaPredicted RBP19.93■□□□□ 0.78
DDR1-247ENST00000502955 CRB1P82279 1406 aa19.93■□□□□ 0.78
DDR1-247ENST00000502955 SRPK2P78362 688 aaKnown RBP19.92■□□□□ 0.78
DDR1-247ENST00000502955 SLIT3O75094 1523 aa19.92■□□□□ 0.78
DDR1-247ENST00000502955 PEAK1Q9H792 1746 aa19.91■□□□□ 0.78
DDR1-247ENST00000502955 RGPD3A6NKT7 1758 aaPredicted RBP19.91■□□□□ 0.78
DDR1-247ENST00000502955 RGPD4Q7Z3J3 1758 aa19.91■□□□□ 0.78
DDR1-247ENST00000502955 NBPF14Q5TI25 921 aa19.91■□□□□ 0.78
DDR1-247ENST00000502955 USP6P35125 1406 aa19.91■□□□□ 0.78
DDR1-247ENST00000502955 QRICH2Q9H0J4 1663 aa19.91■□□□□ 0.78
DDR1-247ENST00000502955 AATKQ6ZMQ8 1374 aa19.9■□□□□ 0.78
DDR1-247ENST00000502955 OVOS2A0A0G2JMS6 1433 aa19.89■□□□□ 0.77
DDR1-247ENST00000502955 OVOS2A0A0J9YW53 1432 aa19.89■□□□□ 0.77
DDR1-247ENST00000502955 OVOS2Q6IE36 1432 aa19.89■□□□□ 0.77
DDR1-247ENST00000502955 CABP2Q9NPB3 220 aa19.89■□□□□ 0.77
DDR1-247ENST00000502955 LRRC37A3O60309 1634 aa19.87■□□□□ 0.77
DDR1-247ENST00000502955 SBF2Q86WG5 1849 aa19.87■□□□□ 0.77
DDR1-247ENST00000502955 COL18A1P39060 1754 aa19.87■□□□□ 0.77
DDR1-247ENST00000502955 NLRP6P59044 892 aa19.86■□□□□ 0.77
DDR1-247ENST00000502955 CABP1Q9NZU7 370 aa19.86■□□□□ 0.77
DDR1-247ENST00000502955 PIK3C2AO00443 1686 aa19.86■□□□□ 0.77
DDR1-247ENST00000502955 PLSCR1O15162 318 aa19.85■□□□□ 0.77
DDR1-247ENST00000502955 WNK3Q9BYP7 1800 aa19.84■□□□□ 0.77
DDR1-247ENST00000502955 BCL9O00512 1426 aa19.84■□□□□ 0.77
DDR1-247ENST00000502955 SPON1Q9HCB6 807 aa19.82■□□□□ 0.76
DDR1-247ENST00000502955 WDR17Q8IZU2 1322 aa19.81■□□□□ 0.76
DDR1-247ENST00000502955 KCNQ2O43526 872 aa19.81■□□□□ 0.76
DDR1-247ENST00000502955 DDB1Q16531 1140 aa19.81■□□□□ 0.76
DDR1-247ENST00000502955 CDCA7Q9BWT1 371 aaPredicted RBP19.81■□□□□ 0.76
DDR1-247ENST00000502955 CPSF1Q10570 1443 aaKnown RBP19.81■□□□□ 0.76
DDR1-247ENST00000502955 TRPM1Q7Z4N2 1603 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms