RNA–Protein interactions for RNA: ENST00000502640.5

LDB2-203, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-203ENST00000502640 SIRT1Q96EB6 747 aa10.72□□□□□ -0.69
LDB2-203ENST00000502640 CCDC61Q9Y6R9 512 aa10.72□□□□□ -0.69
LDB2-203ENST00000502640 ZRANB1Q9UGI0 708 aa10.71□□□□□ -0.69
LDB2-203ENST00000502640 FYB1O15117 783 aa10.71□□□□□ -0.69
LDB2-203ENST00000502640 NPC1L1Q9UHC9 1359 aa10.71□□□□□ -0.7
LDB2-203ENST00000502640 NINLQ9Y2I6 1382 aa10.71□□□□□ -0.7
LDB2-203ENST00000502640 ADAMTS8Q9UP79 889 aa10.71□□□□□ -0.7
LDB2-203ENST00000502640 DIP2AQ14689 1571 aa10.7□□□□□ -0.7
LDB2-203ENST00000502640 WDR43Q15061 677 aaKnown RBP eCLIP10.7□□□□□ -0.7
LDB2-203ENST00000502640 NME9Q86XW9 330 aa10.7□□□□□ -0.7
LDB2-203ENST00000502640 ATP7BP35670 1465 aa10.7□□□□□ -0.7
LDB2-203ENST00000502640 PPM1GO15355 546 aaPredicted RBP10.7□□□□□ -0.7
LDB2-203ENST00000502640 MTHFSP49914 203 aa10.7□□□□□ -0.7
LDB2-203ENST00000502640 PTCH1Q13635 1447 aa10.7□□□□□ -0.7
LDB2-203ENST00000502640 CCDC146Q8IYE0 955 aa10.69□□□□□ -0.7
LDB2-203ENST00000502640 ACEP12821 1306 aa10.69□□□□□ -0.7
LDB2-203ENST00000502640 SOX12O15370 315 aa10.69□□□□□ -0.7
LDB2-203ENST00000502640 XRN1Q8IZH2 1706 aaKnown RBP10.68□□□□□ -0.7
LDB2-203ENST00000502640 NGDNQ8NEJ9 315 aaKnown RBP10.67□□□□□ -0.7
LDB2-203ENST00000502640 PROSER2Q86WR7 435 aaPredicted RBP10.67□□□□□ -0.7
LDB2-203ENST00000502640 ZMYND15Q9H091 742 aa10.67□□□□□ -0.7
LDB2-203ENST00000502640 ZBED9Q6R2W3 1325 aa10.67□□□□□ -0.7
LDB2-203ENST00000502640 PIK3R4Q99570 1358 aa10.67□□□□□ -0.7
LDB2-203ENST00000502640 NKTRP30414 1462 aaKnown RBP10.66□□□□□ -0.7
LDB2-203ENST00000502640 CHD2O14647 1828 aaKnown RBP10.65□□□□□ -0.7
LDB2-203ENST00000502640 CPSF1Q10570 1443 aaKnown RBP10.65□□□□□ -0.7
LDB2-203ENST00000502640 NUTM2GQ5VZR2 741 aa10.65□□□□□ -0.7
LDB2-203ENST00000502640 CFAP44Q96MT7 982 aa10.65□□□□□ -0.71
LDB2-203ENST00000502640 RGPD8O14715 1765 aaPredicted RBP10.64□□□□□ -0.71
LDB2-203ENST00000502640 ADGRB2O60241 1585 aa10.64□□□□□ -0.71
LDB2-203ENST00000502640 CDC42BPGQ6DT37 1551 aa10.64□□□□□ -0.71
LDB2-203ENST00000502640 NSD2O96028 1365 aa10.64□□□□□ -0.71
LDB2-203ENST00000502640 PAK3O75914 559 aaPredicted RBP10.64□□□□□ -0.71
LDB2-203ENST00000502640 USP32Q8NFA0 1604 aa10.64□□□□□ -0.71
LDB2-203ENST00000502640 EDC4Q6P2E9 1401 aaKnown RBP10.63□□□□□ -0.71
LDB2-203ENST00000502640 XPCQ01831 940 aaPredicted RBP10.63□□□□□ -0.71
LDB2-203ENST00000502640 RRS1Q15050 365 aaKnown RBP10.63□□□□□ -0.71
LDB2-203ENST00000502640 ESCO1Q5FWF5 840 aa10.63□□□□□ -0.71
LDB2-203ENST00000502640 LMTK3Q96Q04 1460 aa10.63□□□□□ -0.71
LDB2-203ENST00000502640 U2SURPO15042 1029 aaKnown RBP10.63□□□□□ -0.71
LDB2-203ENST00000502640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.63□□□□□ -0.71
LDB2-203ENST00000502640 COG3Q96JB2 828 aa10.63□□□□□ -0.71
LDB2-203ENST00000502640 EMILIN1Q9Y6C2 1016 aa10.63□□□□□ -0.71
LDB2-203ENST00000502640 NALCNQ8IZF0 1738 aa10.63□□□□□ -0.71
LDB2-203ENST00000502640 TTC21BQ7Z4L5 1316 aa10.62□□□□□ -0.71
LDB2-203ENST00000502640 PLEKHG3A1L390 1219 aa10.62□□□□□ -0.71
LDB2-203ENST00000502640 CFAP53Q96M91 514 aa10.62□□□□□ -0.71
LDB2-203ENST00000502640 ZNF692Q9BU19 519 aaPredicted RBP10.62□□□□□ -0.71
LDB2-203ENST00000502640 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
LDB2-203ENST00000502640 ORAI2Q96SN7 254 aa10.62□□□□□ -0.71
LDB2-203ENST00000502640 SUPT16HQ9Y5B9 1047 aaKnown RBP10.62□□□□□ -0.71
LDB2-203ENST00000502640 U2AF1L5P0DN76 240 aaPredicted RBP10.61□□□□□ -0.71
LDB2-203ENST00000502640 U2AF1Q01081 240 aaKnown RBP eCLIP10.61□□□□□ -0.71
LDB2-203ENST00000502640 ITSN1Q15811 1721 aa10.61□□□□□ -0.71
LDB2-203ENST00000502640 USP6P35125 1406 aa10.61□□□□□ -0.71
LDB2-203ENST00000502640 APAF1O14727 1248 aa10.61□□□□□ -0.71
LDB2-203ENST00000502640 CDCA7LQ96GN5 454 aa10.61□□□□□ -0.71
LDB2-203ENST00000502640 RRP7AQ9Y3A4 280 aaKnown RBP10.61□□□□□ -0.71
LDB2-203ENST00000502640 POLR3AO14802 1390 aaPredicted RBP10.61□□□□□ -0.71
LDB2-203ENST00000502640 KIF20BQ96Q89 1820 aa10.6□□□□□ -0.71
LDB2-203ENST00000502640 POLKQ9UBT6 870 aa10.6□□□□□ -0.71
LDB2-203ENST00000502640 ADGRL3Q9HAR2 1447 aa10.6□□□□□ -0.71
LDB2-203ENST00000502640 PHF8Q9UPP1 1060 aa10.6□□□□□ -0.71
LDB2-203ENST00000502640 TMEM94Q12767 1356 aa10.6□□□□□ -0.71
LDB2-203ENST00000502640 TOPAZ1Q8N9V7 1692 aa10.6□□□□□ -0.71
LDB2-203ENST00000502640 BLMP54132 1417 aaPredicted RBP10.6□□□□□ -0.71
LDB2-203ENST00000502640 FOXO3O43524 673 aa10.59□□□□□ -0.71
LDB2-203ENST00000502640 ZNF335Q9H4Z2 1342 aaPredicted RBP10.59□□□□□ -0.71
LDB2-203ENST00000502640 LMOD2Q6P5Q4 547 aa10.59□□□□□ -0.71
LDB2-203ENST00000502640 MON2Q7Z3U7 1717 aa10.59□□□□□ -0.71
LDB2-203ENST00000502640 AKAP12Q02952 1782 aa10.59□□□□□ -0.71
LDB2-203ENST00000502640 FKBP8Q14318 412 aa10.58□□□□□ -0.72
LDB2-203ENST00000502640 DDX17Q92841 729 aaKnown RBP10.58□□□□□ -0.72
LDB2-203ENST00000502640 RSPH6AQ9H0K4 717 aa10.58□□□□□ -0.72
LDB2-203ENST00000502640 FMN2Q9NZ56 1722 aa10.58□□□□□ -0.72
LDB2-203ENST00000502640 NLRP6P59044 892 aa10.57□□□□□ -0.72
LDB2-203ENST00000502640 PSME1Q06323 249 aa10.57□□□□□ -0.72
LDB2-203ENST00000502640 ABTB2Q8N961 1025 aa10.57□□□□□ -0.72
LDB2-203ENST00000502640 ANKRD26Q9UPS8 1709 aa10.57□□□□□ -0.72
LDB2-203ENST00000502640 STRCP1A6NGW2 1772 aa10.57□□□□□ -0.72
LDB2-203ENST00000502640 ANKARQ7Z5J8 1434 aa10.56□□□□□ -0.72
LDB2-203ENST00000502640 ZBTB7CA1YPR0 619 aa10.56□□□□□ -0.72
LDB2-203ENST00000502640 DIAPH1O60610 1272 aaKnown RBP10.56□□□□□ -0.72
LDB2-203ENST00000502640 ATF3P18847 181 aa10.56□□□□□ -0.72
LDB2-203ENST00000502640 CNKSR2Q8WXI2 1034 aa10.56□□□□□ -0.72
LDB2-203ENST00000502640 C19orf44Q9H6X5 657 aa10.56□□□□□ -0.72
LDB2-203ENST00000502640 HMOX1P09601 288 aa10.56□□□□□ -0.72
LDB2-203ENST00000502640 SHPRHQ149N8 1683 aa10.56□□□□□ -0.72
LDB2-203ENST00000502640 NAP1L5Q96NT1 182 aaPredicted RBP10.55□□□□□ -0.72
LDB2-203ENST00000502640 NUDCQ9Y266 331 aa10.55□□□□□ -0.72
LDB2-203ENST00000502640 STRCQ7RTU9 1775 aa10.55□□□□□ -0.72
LDB2-203ENST00000502640 NWD1Q149M9 1564 aa10.55□□□□□ -0.72
LDB2-203ENST00000502640 IGSF3O75054 1194 aa10.55□□□□□ -0.72
LDB2-203ENST00000502640 ERICH6BQ5W0A0 696 aa10.55□□□□□ -0.72
LDB2-203ENST00000502640 VSIG10Q8N0Z9 540 aa10.55□□□□□ -0.72
LDB2-203ENST00000502640 MAP2P11137 1827 aaKnown RBP10.55□□□□□ -0.72
LDB2-203ENST00000502640 NRKQ7Z2Y5 1582 aa10.55□□□□□ -0.72
LDB2-203ENST00000502640 CDK11BP21127 795 aaKnown RBP10.54□□□□□ -0.72
LDB2-203ENST00000502640 TCP11L2Q8N4U5 519 aa10.54□□□□□ -0.72
LDB2-203ENST00000502640 DMRT2Q9Y5R5 561 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms