RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 DEPDC4Q8N2C3 294 aa13.23□□□□□ -0.29
SNX13-212ENST00000498463 SLAIN2Q9P270 581 aa13.23□□□□□ -0.29
SNX13-212ENST00000498463 FKBPLQ9UIM3 349 aa13.23□□□□□ -0.29
SNX13-212ENST00000498463 SAMD7Q7Z3H4 446 aa13.22□□□□□ -0.29
SNX13-212ENST00000498463 IGSF5Q9NSI5 407 aa13.22□□□□□ -0.29
SNX13-212ENST00000498463 POTEJP0CG39 1038 aa13.21□□□□□ -0.29
SNX13-212ENST00000498463 ERCC3P19447 782 aa13.21□□□□□ -0.29
SNX13-212ENST00000498463 MORN1Q5T089 497 aa13.21□□□□□ -0.29
SNX13-212ENST00000498463 Q3C1V9 767 aa13.2□□□□□ -0.3
SNX13-212ENST00000498463 RNF40O75150 1001 aa13.19□□□□□ -0.3
SNX13-212ENST00000498463 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
SNX13-212ENST00000498463 PSEN2P49810 448 aa13.19□□□□□ -0.3
SNX13-212ENST00000498463 FAM69CQ0P6D2 419 aa13.19□□□□□ -0.3
SNX13-212ENST00000498463 MKRN1Q9UHC7 482 aaKnown RBP13.19□□□□□ -0.3
SNX13-212ENST00000498463 SLC27A5Q9Y2P5 690 aa13.19□□□□□ -0.3
SNX13-212ENST00000498463 SOWAHDA6NJG2 315 aa13.18□□□□□ -0.3
SNX13-212ENST00000498463 PTK7Q13308 1070 aa13.18□□□□□ -0.3
SNX13-212ENST00000498463 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
SNX13-212ENST00000498463 CLP1Q92989 425 aaKnown RBP13.18□□□□□ -0.3
SNX13-212ENST00000498463 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
SNX13-212ENST00000498463 LARP1Q6PKG0 1096 aaKnown RBP13.17□□□□□ -0.3
SNX13-212ENST00000498463 KIAA1522Q9P206 1035 aaPredicted RBP13.17□□□□□ -0.3
SNX13-212ENST00000498463 USP35Q9P2H5 1018 aa13.17□□□□□ -0.3
SNX13-212ENST00000498463 RASA1P20936 1047 aa13.16□□□□□ -0.3
SNX13-212ENST00000498463 NCOA4Q13772 614 aa13.16□□□□□ -0.3
SNX13-212ENST00000498463 PUS10Q3MIT2 529 aaKnown RBP13.16□□□□□ -0.3
SNX13-212ENST00000498463 FAM200AQ8TCP9 573 aa13.16□□□□□ -0.3
SNX13-212ENST00000498463 F12P00748 615 aaPredicted RBP13.15□□□□□ -0.3
SNX13-212ENST00000498463 SERPINB4P48594 390 aa13.15□□□□□ -0.3
SNX13-212ENST00000498463 NOM1Q5C9Z4 860 aaKnown RBP13.15□□□□□ -0.3
SNX13-212ENST00000498463 SLC4A5Q9BY07 1137 aa13.15□□□□□ -0.3
SNX13-212ENST00000498463 ATP5J2-PTCD1G3V325 749 aa13.14□□□□□ -0.31
SNX13-212ENST00000498463 MRRFQ96E11 262 aaKnown RBP13.14□□□□□ -0.31
SNX13-212ENST00000498463 ATP2B4P23634 1241 aa13.13□□□□□ -0.31
SNX13-212ENST00000498463 RNF19BQ6ZMZ0 732 aa13.13□□□□□ -0.31
SNX13-212ENST00000498463 CDCA7Q9BWT1 371 aaPredicted RBP13.13□□□□□ -0.31
SNX13-212ENST00000498463 MAP10Q9P2G4 905 aa13.13□□□□□ -0.31
SNX13-212ENST00000498463 ACTN4O43707 911 aaKnown RBP13.12□□□□□ -0.31
SNX13-212ENST00000498463 ZNF16P17020 682 aaPredicted RBP13.12□□□□□ -0.31
SNX13-212ENST00000498463 SLFNL1Q499Z3 407 aa13.12□□□□□ -0.31
SNX13-212ENST00000498463 ANKMY2Q8IV38 441 aa13.12□□□□□ -0.31
SNX13-212ENST00000498463 USB1Q9BQ65 265 aaKnown RBP13.11□□□□□ -0.31
SNX13-212ENST00000498463 BCL2L13Q9BXK5 485 aa13.11□□□□□ -0.31
SNX13-212ENST00000498463 MARSP56192 900 aaKnown RBP13.1□□□□□ -0.31
SNX13-212ENST00000498463 BLOC1S3Q6QNY0 202 aa13.1□□□□□ -0.31
SNX13-212ENST00000498463 RNF135Q8IUD6 432 aa13.1□□□□□ -0.31
SNX13-212ENST00000498463 PLPP7Q8NBV4 271 aa13.1□□□□□ -0.31
SNX13-212ENST00000498463 SIRT1Q96EB6 747 aa13.1□□□□□ -0.31
SNX13-212ENST00000498463 CEP126Q9P2H0 1117 aa13.1□□□□□ -0.31
SNX13-212ENST00000498463 LAPTM4BQ86VI4 370 aa13.09□□□□□ -0.31
SNX13-212ENST00000498463 SWI5Q1ZZU3 235 aa13.08□□□□□ -0.32
SNX13-212ENST00000498463 ZNF592Q92610 1267 aa13.08□□□□□ -0.32
SNX13-212ENST00000498463 SCUBE2Q9NQ36 999 aa13.08□□□□□ -0.32
SNX13-212ENST00000498463 ARHGAP33O14559 1287 aa13.07□□□□□ -0.32
SNX13-212ENST00000498463 LZTS3O60299 673 aaPredicted RBP13.07□□□□□ -0.32
SNX13-212ENST00000498463 DPYDQ12882 1025 aa13.07□□□□□ -0.32
SNX13-212ENST00000498463 PTPRNQ16849 979 aa13.07□□□□□ -0.32
SNX13-212ENST00000498463 DMRTA1Q5VZB9 504 aa13.07□□□□□ -0.32
SNX13-212ENST00000498463 PHTF2Q8N3S3 785 aa13.07□□□□□ -0.32
SNX13-212ENST00000498463 BIN2Q9UBW5 565 aaPredicted RBP13.07□□□□□ -0.32
SNX13-212ENST00000498463 SCNN1AP37088 669 aa13.06□□□□□ -0.32
SNX13-212ENST00000498463 KCNH2Q12809 1159 aa13.06□□□□□ -0.32
SNX13-212ENST00000498463 OGFOD1Q8N543 542 aa13.06□□□□□ -0.32
SNX13-212ENST00000498463 GIPC2Q8TF65 315 aa13.06□□□□□ -0.32
SNX13-212ENST00000498463 GPSM3Q9Y4H4 160 aa13.06□□□□□ -0.32
SNX13-212ENST00000498463 PCDHB9Q9Y5E1 797 aa13.06□□□□□ -0.32
SNX13-212ENST00000498463 BRICD5Q6PL45 260 aa13.05□□□□□ -0.32
SNX13-212ENST00000498463 ZNF594Q96JF6 807 aaPredicted RBP13.05□□□□□ -0.32
SNX13-212ENST00000498463 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
SNX13-212ENST00000498463 SNPHO15079 494 aa13.04□□□□□ -0.32
SNX13-212ENST00000498463 JUNDP17535 347 aa13.04□□□□□ -0.32
SNX13-212ENST00000498463 POTEEQ6S8J3 1075 aa13.04□□□□□ -0.32
SNX13-212ENST00000498463 C1orf216Q8TAB5 229 aa13.04□□□□□ -0.32
SNX13-212ENST00000498463 OCSTAMPQ9BR26 566 aa13.04□□□□□ -0.32
SNX13-212ENST00000498463 CHIC2Q9UKJ5 165 aa13.04□□□□□ -0.32
SNX13-212ENST00000498463 SALL2Q9Y467 1007 aaPredicted RBP13.04□□□□□ -0.32
SNX13-212ENST00000498463 POTEB2H3BUK9 544 aa13.03□□□□□ -0.32
SNX13-212ENST00000498463 CTHP32929 405 aa13.03□□□□□ -0.32
SNX13-212ENST00000498463 MCCD1P59942 119 aaPredicted RBP13.03□□□□□ -0.32
SNX13-212ENST00000498463 CLDN10P78369 228 aa13.03□□□□□ -0.32
SNX13-212ENST00000498463 PTK2Q05397 1052 aa13.03□□□□□ -0.32
SNX13-212ENST00000498463 EML3Q32P44 896 aa13.03□□□□□ -0.32
SNX13-212ENST00000498463 NPAS4Q8IUM7 802 aa13.03□□□□□ -0.32
SNX13-212ENST00000498463 ZFRQ96KR1 1074 aaKnown RBP13.03□□□□□ -0.32
SNX13-212ENST00000498463 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
SNX13-212ENST00000498463 ANKRD33BA6NCL7 494 aa13.02□□□□□ -0.33
SNX13-212ENST00000498463 MAP7D1Q3KQU3 841 aa13.02□□□□□ -0.33
SNX13-212ENST00000498463 PRR14Q9BWN1 585 aa13.02□□□□□ -0.33
SNX13-212ENST00000498463 PDXDC2PQ6P474 469 aa13.01□□□□□ -0.33
SNX13-212ENST00000498463 TRIM50Q86XT4 487 aa13.01□□□□□ -0.33
SNX13-212ENST00000498463 DNAAF2Q9NVR5 837 aaKnown RBP13.01□□□□□ -0.33
SNX13-212ENST00000498463 TRAF7Q6Q0C0 670 aa13□□□□□ -0.33
SNX13-212ENST00000498463 MAMSTRQ6ZN01 415 aa13□□□□□ -0.33
SNX13-212ENST00000498463 GPKOWQ92917 476 aaPredicted RBP eCLIP13□□□□□ -0.33
SNX13-212ENST00000498463 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
SNX13-212ENST00000498463 TCF3P15923 654 aa12.99□□□□□ -0.33
SNX13-212ENST00000498463 ATP1A2P50993 1020 aa12.98□□□□□ -0.33
SNX13-212ENST00000498463 ARMC2Q8NEN0 867 aa12.98□□□□□ -0.33
SNX13-212ENST00000498463 THAP11Q96EK4 314 aa12.98□□□□□ -0.33
SNX13-212ENST00000498463 PRMT3O60678 531 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms