RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 TULP4Q9NRJ4 1543 aa31.99■■■□□ 2.71
CLIC4-204ENST00000497755 NGDNQ8NEJ9 315 aaKnown RBP31.97■■■□□ 2.71
CLIC4-204ENST00000497755 STAC3Q96MF2 364 aa31.96■■■□□ 2.71
CLIC4-204ENST00000497755 COL14A1Q05707 1796 aaKnown RBP31.95■■■□□ 2.71
CLIC4-204ENST00000497755 PAK3O75914 559 aaPredicted RBP31.94■■■□□ 2.7
CLIC4-204ENST00000497755 SPATA31A5Q5VU36 1347 aa31.94■■■□□ 2.7
CLIC4-204ENST00000497755 SPATA31A7Q8IWB4 1347 aa31.94■■■□□ 2.7
CLIC4-204ENST00000497755 BAG6P46379 1132 aa31.92■■■□□ 2.7
CLIC4-204ENST00000497755 FAM182BQ5T319 152 aa31.89■■■□□ 2.7
CLIC4-204ENST00000497755 NUDT16Q96DE0 195 aaKnown RBP31.89■■■□□ 2.7
CLIC4-204ENST00000497755 CRYBG1Q9Y4K1 1723 aa31.89■■■□□ 2.69
CLIC4-204ENST00000497755 PRDM11Q9NQV5 511 aa31.88■■■□□ 2.69
CLIC4-204ENST00000497755 PSDA5PKW4 1024 aaPredicted RBP31.86■■■□□ 2.69
CLIC4-204ENST00000497755 EN1Q05925 392 aaPredicted RBP31.85■■■□□ 2.69
CLIC4-204ENST00000497755 HRCP23327 699 aa31.84■■■□□ 2.69
CLIC4-204ENST00000497755 ATP7BP35670 1465 aa31.84■■■□□ 2.69
CLIC4-204ENST00000497755 CDK19Q9BWU1 502 aa31.83■■■□□ 2.69
CLIC4-204ENST00000497755 ARHGEF28Q8N1W1 1705 aaKnown RBP31.83■■■□□ 2.69
CLIC4-204ENST00000497755 KIAA0232Q92628 1395 aa31.82■■■□□ 2.69
CLIC4-204ENST00000497755 SPATA31A1Q5TZJ5 1347 aa31.81■■■□□ 2.68
CLIC4-204ENST00000497755 CHRNA2Q15822 529 aa31.81■■■□□ 2.68
CLIC4-204ENST00000497755 THSD7AQ9UPZ6 1657 aa31.8■■■□□ 2.68
CLIC4-204ENST00000497755 LRP5O75197 1615 aa31.8■■■□□ 2.68
CLIC4-204ENST00000497755 ITSN1Q15811 1721 aa31.78■■■□□ 2.68
CLIC4-204ENST00000497755 ZC3H6P61129 1189 aaKnown RBP31.78■■■□□ 2.68
CLIC4-204ENST00000497755 NUTM2GQ5VZR2 741 aa31.78■■■□□ 2.68
CLIC4-204ENST00000497755 RGPD1P0DJD0 1748 aa31.78■■■□□ 2.68
CLIC4-204ENST00000497755 NBPF8Q3BBV2 869 aa31.77■■■□□ 2.68
CLIC4-204ENST00000497755 STRN4Q9NRL3 753 aa31.76■■■□□ 2.67
CLIC4-204ENST00000497755 ACEP12821 1306 aa31.75■■■□□ 2.67
CLIC4-204ENST00000497755 CCDC61Q9Y6R9 512 aa31.75■■■□□ 2.67
CLIC4-204ENST00000497755 POLR3AO14802 1390 aaPredicted RBP31.75■■■□□ 2.67
CLIC4-204ENST00000497755 DISP2A7MBM2 1401 aa31.74■■■□□ 2.67
CLIC4-204ENST00000497755 PLEKHG3A1L390 1219 aa31.73■■■□□ 2.67
CLIC4-204ENST00000497755 PHRF1Q9P1Y6 1649 aaKnown RBP31.72■■■□□ 2.67
CLIC4-204ENST00000497755 R3HDM1Q15032 1099 aaKnown RBP31.71■■■□□ 2.67
CLIC4-204ENST00000497755 EZH2Q15910 746 aaKnown RBP31.71■■■□□ 2.67
CLIC4-204ENST00000497755 FAM196AQ6ZSG2 479 aa31.71■■■□□ 2.67
CLIC4-204ENST00000497755 TRIM37O94972 964 aa31.7■■■□□ 2.67
CLIC4-204ENST00000497755 TNS1Q9HBL0 1735 aaKnown RBP31.69■■■□□ 2.66
CLIC4-204ENST00000497755 EVA1CP58658 441 aa31.69■■■□□ 2.66
CLIC4-204ENST00000497755 CAMKK2Q96RR4 588 aa31.69■■■□□ 2.66
CLIC4-204ENST00000497755 USP35Q9P2H5 1018 aa31.69■■■□□ 2.66
CLIC4-204ENST00000497755 NBPF1Q3BBV0 1214 aa31.68■■■□□ 2.66
CLIC4-204ENST00000497755 ABTB2Q8N961 1025 aa31.67■■■□□ 2.66
CLIC4-204ENST00000497755 TOPAZ1Q8N9V7 1692 aa31.67■■■□□ 2.66
CLIC4-204ENST00000497755 BARGINQ6ZT62 677 aa31.66■■■□□ 2.66
CLIC4-204ENST00000497755 SSH2Q76I76 1423 aa31.64■■■□□ 2.66
CLIC4-204ENST00000497755 CAMTA1Q9Y6Y1 1673 aa31.64■■■□□ 2.65
CLIC4-204ENST00000497755 APBA3O96018 575 aa31.63■■■□□ 2.65
CLIC4-204ENST00000497755 LARP1Q6PKG0 1096 aaKnown RBP31.63■■■□□ 2.65
CLIC4-204ENST00000497755 KIAA1210Q9ULL0 1709 aa31.63■■■□□ 2.65
CLIC4-204ENST00000497755 CPDO75976 1380 aa31.61■■■□□ 2.65
CLIC4-204ENST00000497755 USP19O94966 1318 aa31.61■■■□□ 2.65
CLIC4-204ENST00000497755 PDE3BQ13370 1112 aa31.61■■■□□ 2.65
CLIC4-204ENST00000497755 TCP11L2Q8N4U5 519 aa31.59■■■□□ 2.65
CLIC4-204ENST00000497755 NRKQ7Z2Y5 1582 aa31.59■■■□□ 2.65
CLIC4-204ENST00000497755 GCP02774 474 aa31.58■■■□□ 2.65
CLIC4-204ENST00000497755 NLRP13Q86W25 1043 aa31.58■■■□□ 2.65
CLIC4-204ENST00000497755 SRPK2P78362 688 aaKnown RBP31.57■■■□□ 2.64
CLIC4-204ENST00000497755 CABP2Q9NPB3 220 aa31.56■■■□□ 2.64
CLIC4-204ENST00000497755 LMO7Q8WWI1 1683 aa31.56■■■□□ 2.64
CLIC4-204ENST00000497755 PPIP5K1Q6PFW1 1433 aa31.55■■■□□ 2.64
CLIC4-204ENST00000497755 PARD3Q8TEW0 1356 aa31.55■■■□□ 2.64
CLIC4-204ENST00000497755 THRAP3Q9Y2W1 955 aaKnown RBP31.54■■■□□ 2.64
CLIC4-204ENST00000497755 CENPJQ9HC77 1338 aaPredicted RBP31.53■■■□□ 2.64
CLIC4-204ENST00000497755 CABP1Q9NZU7 370 aa31.49■■■□□ 2.63
CLIC4-204ENST00000497755 BRD4O60885 1362 aaPredicted RBP31.48■■■□□ 2.63
CLIC4-204ENST00000497755 COL5A2P05997 1499 aaPredicted RBP31.47■■■□□ 2.63
CLIC4-204ENST00000497755 NLRP6P59044 892 aa31.45■■■□□ 2.63
CLIC4-204ENST00000497755 RREB1Q92766 1687 aa31.44■■■□□ 2.62
CLIC4-204ENST00000497755 NBPF14Q5TI25 921 aa31.44■■■□□ 2.62
CLIC4-204ENST00000497755 USP6P35125 1406 aa31.42■■■□□ 2.62
CLIC4-204ENST00000497755 CRB1P82279 1406 aa31.42■■■□□ 2.62
CLIC4-204ENST00000497755 PARP4Q9UKK3 1724 aaKnown RBP31.42■■■□□ 2.62
CLIC4-204ENST00000497755 ZBTB7CA1YPR0 619 aa31.42■■■□□ 2.62
CLIC4-204ENST00000497755 AATKQ6ZMQ8 1374 aa31.42■■■□□ 2.62
CLIC4-204ENST00000497755 NUP188Q5SRE5 1749 aa31.41■■■□□ 2.62
CLIC4-204ENST00000497755 QRICH2Q9H0J4 1663 aa31.4■■■□□ 2.62
CLIC4-204ENST00000497755 C11orf95C9JLR9 678 aaPredicted RBP31.39■■■□□ 2.62
CLIC4-204ENST00000497755 L3MBTL2Q969R5 705 aa31.38■■■□□ 2.61
CLIC4-204ENST00000497755 SLIT3O75094 1523 aa31.37■■■□□ 2.61
CLIC4-204ENST00000497755 AXIN2Q9Y2T1 843 aa31.36■■■□□ 2.61
CLIC4-204ENST00000497755 TOM1L2Q6ZVM7 507 aa31.34■■■□□ 2.61
CLIC4-204ENST00000497755 COL18A1P39060 1754 aa31.33■■■□□ 2.61
CLIC4-204ENST00000497755 PEAK1Q9H792 1746 aa31.33■■■□□ 2.61
CLIC4-204ENST00000497755 EVC2Q86UK5 1308 aa31.33■■■□□ 2.61
CLIC4-204ENST00000497755 DDB1Q16531 1140 aa31.33■■■□□ 2.61
CLIC4-204ENST00000497755 OVOS2A0A0G2JMS6 1433 aa31.32■■■□□ 2.61
CLIC4-204ENST00000497755 OVOS2A0A0J9YW53 1432 aa31.32■■■□□ 2.61
CLIC4-204ENST00000497755 OVOS2Q6IE36 1432 aa31.32■■■□□ 2.61
CLIC4-204ENST00000497755 PLSCR1O15162 318 aa31.31■■■□□ 2.6
CLIC4-204ENST00000497755 PIK3C2AO00443 1686 aa31.31■■■□□ 2.6
CLIC4-204ENST00000497755 PTF1AQ7RTS3 328 aa31.3■■■□□ 2.6
CLIC4-204ENST00000497755 WDR17Q8IZU2 1322 aa31.29■■■□□ 2.6
CLIC4-204ENST00000497755 SBF2Q86WG5 1849 aa31.29■■■□□ 2.6
CLIC4-204ENST00000497755 ARHGEF25Q86VW2 580 aa31.29■■■□□ 2.6
CLIC4-204ENST00000497755 ZNF692Q9BU19 519 aaPredicted RBP31.29■■■□□ 2.6
CLIC4-204ENST00000497755 TTC21BQ7Z4L5 1316 aa31.28■■■□□ 2.6
CLIC4-204ENST00000497755 SPON1Q9HCB6 807 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms