RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SH3BP2P78314 561 aa4.71□□□□□ -1.66
SNRNP48-202ENST00000496946 ST8SIA5O15466 376 aa4.7□□□□□ -1.66
SNRNP48-202ENST00000496946 GPR37L1O60883 481 aa4.7□□□□□ -1.66
SNRNP48-202ENST00000496946 MTMR14Q8NCE2 650 aa4.7□□□□□ -1.66
SNRNP48-202ENST00000496946 POM121Q96HA1 1249 aa4.7□□□□□ -1.66
SNRNP48-202ENST00000496946 RSPH6AQ9H0K4 717 aa4.7□□□□□ -1.66
SNRNP48-202ENST00000496946 PKD2L1Q9P0L9 805 aa4.7□□□□□ -1.66
SNRNP48-202ENST00000496946 GFRA3O60609 400 aa4.7□□□□□ -1.66
SNRNP48-202ENST00000496946 IFFO2Q5TF58 517 aa4.7□□□□□ -1.66
SNRNP48-202ENST00000496946 TRIM34Q9BYJ4 488 aa4.7□□□□□ -1.66
SNRNP48-202ENST00000496946 EVA1BQ9NVM1 165 aa4.7□□□□□ -1.66
SNRNP48-202ENST00000496946 F12P00748 615 aaPredicted RBP4.69□□□□□ -1.66
SNRNP48-202ENST00000496946 GGCXP38435 758 aa4.69□□□□□ -1.66
SNRNP48-202ENST00000496946 ARID5BQ14865 1188 aa4.69□□□□□ -1.66
SNRNP48-202ENST00000496946 AGERQ15109 404 aa4.69□□□□□ -1.66
SNRNP48-202ENST00000496946 DACH1Q9UI36 760 aa4.69□□□□□ -1.66
SNRNP48-202ENST00000496946 POTECB2RU33 542 aa4.69□□□□□ -1.66
SNRNP48-202ENST00000496946 ZBTB24O43167 697 aaPredicted RBP4.69□□□□□ -1.66
SNRNP48-202ENST00000496946 RAB15P59190 212 aa4.69□□□□□ -1.66
SNRNP48-202ENST00000496946 LYPD8Q6UX82 237 aa4.69□□□□□ -1.66
SNRNP48-202ENST00000496946 HELBQ8NG08 1087 aaPredicted RBP4.69□□□□□ -1.66
SNRNP48-202ENST00000496946 OCSTAMPQ9BR26 566 aa4.69□□□□□ -1.66
SNRNP48-202ENST00000496946 NEFLP07196 543 aa4.68□□□□□ -1.66
SNRNP48-202ENST00000496946 Q6ZNB5 142 aa4.68□□□□□ -1.66
SNRNP48-202ENST00000496946 TBC1D2BQ9UPU7 963 aa4.68□□□□□ -1.66
SNRNP48-202ENST00000496946 GDF9O60383 454 aa4.68□□□□□ -1.66
SNRNP48-202ENST00000496946 UBTFP17480 764 aaKnown RBP4.68□□□□□ -1.66
SNRNP48-202ENST00000496946 PTPRNQ16849 979 aa4.68□□□□□ -1.66
SNRNP48-202ENST00000496946 PCMTD1Q96MG8 357 aaPredicted RBP4.68□□□□□ -1.66
SNRNP48-202ENST00000496946 DIXDC1Q155Q3 683 aa4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 PRPF38BQ5VTL8 546 aaKnown RBP4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 ZNF511Q8NB15 262 aa4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 PKNOX2Q96KN3 472 aa4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 GJD4Q96KN9 370 aaPredicted RBP4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 ALDH1A1P00352 501 aa4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 BMP1P13497 986 aa4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 PDE4CQ08493 712 aa4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 RC3H1Q5TC82 1133 aaKnown RBP4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 ZNF598Q86UK7 904 aaKnown RBP4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 EHBP1Q8NDI1 1231 aa4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 GDPD2Q9HCC8 539 aa4.67□□□□□ -1.66
SNRNP48-202ENST00000496946 SPDYE5A6NIY4 337 aa4.66□□□□□ -1.66
SNRNP48-202ENST00000496946 KCNH2Q12809 1159 aa4.66□□□□□ -1.66
SNRNP48-202ENST00000496946 IRX2Q9BZI1 471 aaPredicted RBP4.66□□□□□ -1.66
SNRNP48-202ENST00000496946 FAM187AA6NFU0 413 aa4.66□□□□□ -1.66
SNRNP48-202ENST00000496946 PPP2R2DQ66LE6 453 aa4.66□□□□□ -1.66
SNRNP48-202ENST00000496946 LOC105371045A0A1W2PR82 267 aa4.65□□□□□ -1.66
SNRNP48-202ENST00000496946 HPS1Q92902 700 aa4.65□□□□□ -1.66
SNRNP48-202ENST00000496946 NR3C2P08235 984 aa4.65□□□□□ -1.67
SNRNP48-202ENST00000496946 CLUAP1Q96AJ1 413 aa4.65□□□□□ -1.67
SNRNP48-202ENST00000496946 V9GY48 417 aaPredicted RBP4.65□□□□□ -1.67
SNRNP48-202ENST00000496946 GJA5P36382 358 aa4.64□□□□□ -1.67
SNRNP48-202ENST00000496946 DESI1Q6ICB0 168 aa4.64□□□□□ -1.67
SNRNP48-202ENST00000496946 CD2BP2O95400 341 aaKnown RBP4.64□□□□□ -1.67
SNRNP48-202ENST00000496946 TTC24A2A3L6 582 aaPredicted RBP4.63□□□□□ -1.67
SNRNP48-202ENST00000496946 FBXO45P0C2W1 286 aa4.63□□□□□ -1.67
SNRNP48-202ENST00000496946 MCM6Q14566 821 aa4.63□□□□□ -1.67
SNRNP48-202ENST00000496946 FSHRP23945 695 aa4.62□□□□□ -1.67
SNRNP48-202ENST00000496946 GOPCQ9HD26 462 aa4.62□□□□□ -1.67
SNRNP48-202ENST00000496946 FKBPLQ9UIM3 349 aa4.62□□□□□ -1.67
SNRNP48-202ENST00000496946 STAU1O95793 577 aaKnown RBP4.62□□□□□ -1.67
SNRNP48-202ENST00000496946 SMPD1P17405 629 aa4.62□□□□□ -1.67
SNRNP48-202ENST00000496946 ABL2P42684 1182 aa4.62□□□□□ -1.67
SNRNP48-202ENST00000496946 VAC14Q08AM6 782 aa4.62□□□□□ -1.67
SNRNP48-202ENST00000496946 ADAM32Q8TC27 787 aa4.62□□□□□ -1.67
SNRNP48-202ENST00000496946 TOR4AQ9NXH8 423 aa4.62□□□□□ -1.67
SNRNP48-202ENST00000496946 SIAH2O43255 324 aa4.61□□□□□ -1.67
SNRNP48-202ENST00000496946 ERFEQ4G0M1 354 aa4.61□□□□□ -1.67
SNRNP48-202ENST00000496946 TAF7LQ5H9L4 462 aa4.61□□□□□ -1.67
SNRNP48-202ENST00000496946 SH3RF1Q7Z6J0 888 aa4.61□□□□□ -1.67
SNRNP48-202ENST00000496946 ZFAND3Q9H8U3 227 aa4.61□□□□□ -1.67
SNRNP48-202ENST00000496946 ITPKCQ96DU7 683 aa4.61□□□□□ -1.67
SNRNP48-202ENST00000496946 SOBPA7XYQ1 873 aa4.6□□□□□ -1.67
SNRNP48-202ENST00000496946 GRM5P41594 1212 aa4.6□□□□□ -1.67
SNRNP48-202ENST00000496946 TSGA10IPQ3SY00 556 aa4.6□□□□□ -1.67
SNRNP48-202ENST00000496946 PKDCCQ504Y2 493 aa4.6□□□□□ -1.67
SNRNP48-202ENST00000496946 CYP4X1Q8N118 509 aa4.6□□□□□ -1.67
SNRNP48-202ENST00000496946 CHMP4AQ9BY43 222 aa4.6□□□□□ -1.67
SNRNP48-202ENST00000496946 WNT7AO00755 349 aa4.6□□□□□ -1.67
SNRNP48-202ENST00000496946 SH3BP5LQ7L8J4 393 aa4.6□□□□□ -1.67
SNRNP48-202ENST00000496946 POM121CA8CG34 1229 aa4.59□□□□□ -1.67
SNRNP48-202ENST00000496946 TMPRSS4Q9NRS4 437 aa4.59□□□□□ -1.67
SNRNP48-202ENST00000496946 BRD2P25440 801 aaKnown RBP4.59□□□□□ -1.67
SNRNP48-202ENST00000496946 IRF5Q13568 498 aa4.59□□□□□ -1.67
SNRNP48-202ENST00000496946 TUSC1Q2TAM9 212 aa4.59□□□□□ -1.67
SNRNP48-202ENST00000496946 RPIAP49247 311 aa4.59□□□□□ -1.68
SNRNP48-202ENST00000496946 CBLBQ13191 982 aa4.59□□□□□ -1.68
SNRNP48-202ENST00000496946 ARHGAP9Q9BRR9 750 aa4.58□□□□□ -1.68
SNRNP48-202ENST00000496946 CDK11AQ9UQ88 783 aaPredicted RBP4.58□□□□□ -1.68
SNRNP48-202ENST00000496946 CDK11BP21127 795 aaKnown RBP4.58□□□□□ -1.68
SNRNP48-202ENST00000496946 SCTRP47872 440 aa4.58□□□□□ -1.68
SNRNP48-202ENST00000496946 NNTQ13423 1086 aa4.58□□□□□ -1.68
SNRNP48-202ENST00000496946 TRAF7Q6Q0C0 670 aa4.58□□□□□ -1.68
SNRNP48-202ENST00000496946 ANP32EQ9BTT0 268 aa4.58□□□□□ -1.68
SNRNP48-202ENST00000496946 AAASQ9NRG9 546 aa4.58□□□□□ -1.68
SNRNP48-202ENST00000496946 PIK3CDO00329 1044 aa4.57□□□□□ -1.68
SNRNP48-202ENST00000496946 WNT7BP56706 349 aa4.57□□□□□ -1.68
SNRNP48-202ENST00000496946 VASH1Q7L8A9 365 aaPredicted RBP4.57□□□□□ -1.68
SNRNP48-202ENST00000496946 ZBTB33Q86T24 672 aa4.57□□□□□ -1.68
SNRNP48-202ENST00000496946 BPHLQ86WA6 291 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms