RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ZMYM4Q5VZL5 1548 aa8.41□□□□□ -1.06
SSBP1-213ENST00000496622 SPATA31E1Q6ZUB1 1445 aa8.41□□□□□ -1.06
SSBP1-213ENST00000496622 ROCK2O75116 1388 aaKnown RBP8.41□□□□□ -1.06
SSBP1-213ENST00000496622 KDM5DQ9BY66 1539 aa8.41□□□□□ -1.06
SSBP1-213ENST00000496622 ZNF518AQ6AHZ1 1483 aa8.41□□□□□ -1.06
SSBP1-213ENST00000496622 POGZQ7Z3K3 1410 aa8.41□□□□□ -1.06
SSBP1-213ENST00000496622 NUDT7P0C024 238 aa8.41□□□□□ -1.06
SSBP1-213ENST00000496622 A2MP01023 1474 aa8.41□□□□□ -1.06
SSBP1-213ENST00000496622 ZNF710Q8N1W2 664 aa8.4□□□□□ -1.06
SSBP1-213ENST00000496622 PLXNC1O60486 1568 aa8.4□□□□□ -1.06
SSBP1-213ENST00000496622 ARHGEF40Q8TER5 1519 aa8.4□□□□□ -1.06
SSBP1-213ENST00000496622 RICTORQ6R327 1708 aa8.4□□□□□ -1.06
SSBP1-213ENST00000496622 FRMPD1Q5SYB0 1578 aa8.4□□□□□ -1.06
SSBP1-213ENST00000496622 UGGT1Q9NYU2 1555 aa8.4□□□□□ -1.06
SSBP1-213ENST00000496622 GPR153Q6NV75 609 aa8.4□□□□□ -1.07
SSBP1-213ENST00000496622 POTEAQ6S8J7 498 aa8.4□□□□□ -1.07
SSBP1-213ENST00000496622 RSPH6AQ9H0K4 717 aa8.4□□□□□ -1.07
SSBP1-213ENST00000496622 CCDC7Q96M83 1385 aa8.4□□□□□ -1.07
SSBP1-213ENST00000496622 MAGI2Q86UL8 1455 aa8.39□□□□□ -1.07
SSBP1-213ENST00000496622 MFSD10Q14728 455 aa8.39□□□□□ -1.07
SSBP1-213ENST00000496622 KANK1Q14678 1352 aa8.38□□□□□ -1.07
SSBP1-213ENST00000496622 TOM1O60784 492 aa8.38□□□□□ -1.07
SSBP1-213ENST00000496622 YY1P25490 414 aa8.38□□□□□ -1.07
SSBP1-213ENST00000496622 FBXO31Q5XUX0 539 aaPredicted RBP8.38□□□□□ -1.07
SSBP1-213ENST00000496622 ATP10AO60312 1499 aa8.38□□□□□ -1.07
SSBP1-213ENST00000496622 UNC13BO14795 1591 aa8.38□□□□□ -1.07
SSBP1-213ENST00000496622 DPYSL4O14531 572 aa8.37□□□□□ -1.07
SSBP1-213ENST00000496622 CFAP70Q5T0N1 1121 aa8.37□□□□□ -1.07
SSBP1-213ENST00000496622 KIDINS220Q9ULH0 1771 aa8.37□□□□□ -1.07
SSBP1-213ENST00000496622 ADGRF5Q8IZF2 1346 aa8.37□□□□□ -1.07
SSBP1-213ENST00000496622 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
SSBP1-213ENST00000496622 INO80Q9ULG1 1556 aaPredicted RBP8.37□□□□□ -1.07
SSBP1-213ENST00000496622 PRAG1Q86YV5 1406 aa8.37□□□□□ -1.07
SSBP1-213ENST00000496622 POTEB3A0JP26 581 aa8.36□□□□□ -1.07
SSBP1-213ENST00000496622 POTEBQ6S5H4 581 aa8.36□□□□□ -1.07
SSBP1-213ENST00000496622 IQGAP3Q86VI3 1631 aa8.36□□□□□ -1.07
SSBP1-213ENST00000496622 DOK7Q18PE1 504 aa8.35□□□□□ -1.07
SSBP1-213ENST00000496622 PCDHGA4Q9Y5G9 962 aa8.35□□□□□ -1.07
SSBP1-213ENST00000496622 IRX6P78412 446 aaPredicted RBP8.35□□□□□ -1.07
SSBP1-213ENST00000496622 PRKRIP1Q9H875 184 aaPredicted RBP8.35□□□□□ -1.07
SSBP1-213ENST00000496622 NPATQ14207 1427 aa8.35□□□□□ -1.07
SSBP1-213ENST00000496622 UHRF1BP1Q6BDS2 1440 aa8.35□□□□□ -1.07
SSBP1-213ENST00000496622 MLH3Q9UHC1 1453 aa8.35□□□□□ -1.07
SSBP1-213ENST00000496622 PRDM15P57071 1507 aaPredicted RBP8.35□□□□□ -1.07
SSBP1-213ENST00000496622 CFAP65Q6ZU64 1925 aaKnown RBP8.35□□□□□ -1.07
SSBP1-213ENST00000496622 FAM205CA6NFA0 338 aa8.34□□□□□ -1.07
SSBP1-213ENST00000496622 TMEM132EQ6IEE7 984 aa8.34□□□□□ -1.07
SSBP1-213ENST00000496622 FAM9BQ8IZU0 186 aa8.34□□□□□ -1.07
SSBP1-213ENST00000496622 WDR70Q9NW82 654 aa8.34□□□□□ -1.07
SSBP1-213ENST00000496622 E9PCH4 1651 aa8.34□□□□□ -1.07
SSBP1-213ENST00000496622 REREQ9P2R6 1566 aa8.34□□□□□ -1.08
SSBP1-213ENST00000496622 IDI1Q13907 227 aa8.33□□□□□ -1.08
SSBP1-213ENST00000496622 E2F4Q16254 413 aa8.33□□□□□ -1.08
SSBP1-213ENST00000496622 TESK2Q96S53 571 aa8.33□□□□□ -1.08
SSBP1-213ENST00000496622 MROH1Q8NDA8 1641 aa8.33□□□□□ -1.08
SSBP1-213ENST00000496622 POTEMA6NI47 508 aa8.33□□□□□ -1.08
SSBP1-213ENST00000496622 EMP3P54852 163 aa8.33□□□□□ -1.08
SSBP1-213ENST00000496622 OXER1Q8TDS5 423 aa8.33□□□□□ -1.08
SSBP1-213ENST00000496622 RALGAPBQ86X10 1494 aa8.33□□□□□ -1.08
SSBP1-213ENST00000496622 CDK12Q9NYV4 1490 aaPredicted RBP8.33□□□□□ -1.08
SSBP1-213ENST00000496622 POTEGQ6S5H5 508 aa8.33□□□□□ -1.08
SSBP1-213ENST00000496622 KDM5CP41229 1560 aa8.32□□□□□ -1.08
SSBP1-213ENST00000496622 SETBP1Q9Y6X0 1596 aa8.32□□□□□ -1.08
SSBP1-213ENST00000496622 SNPHO15079 494 aa8.32□□□□□ -1.08
SSBP1-213ENST00000496622 GLIPR1L2Q4G1C9 344 aa8.32□□□□□ -1.08
SSBP1-213ENST00000496622 PTCD2Q8WV60 388 aaKnown RBP8.32□□□□□ -1.08
SSBP1-213ENST00000496622 BCANQ96GW7 911 aa8.32□□□□□ -1.08
SSBP1-213ENST00000496622 CNTLNQ9NXG0 1405 aa8.32□□□□□ -1.08
SSBP1-213ENST00000496622 ABCA6Q8N139 1617 aa8.32□□□□□ -1.08
SSBP1-213ENST00000496622 VSIG10Q8N0Z9 540 aa8.32□□□□□ -1.08
SSBP1-213ENST00000496622 NAP1L5Q96NT1 182 aaPredicted RBP8.32□□□□□ -1.08
SSBP1-213ENST00000496622 MRS2Q9HD23 443 aa8.32□□□□□ -1.08
SSBP1-213ENST00000496622 HOXB1P14653 301 aaPredicted RBP8.31□□□□□ -1.08
SSBP1-213ENST00000496622 SAFB2Q14151 953 aaKnown RBP eCLIP8.31□□□□□ -1.08
SSBP1-213ENST00000496622 TRAK1Q9UPV9 953 aa8.31□□□□□ -1.08
SSBP1-213ENST00000496622 ARID4BQ4LE39 1312 aaPredicted RBP8.31□□□□□ -1.08
SSBP1-213ENST00000496622 CAMK2BQ13554 666 aa8.31□□□□□ -1.08
SSBP1-213ENST00000496622 CCER2I3L3R5 266 aa8.3□□□□□ -1.08
SSBP1-213ENST00000496622 RIMBP2O15034 1052 aa8.3□□□□□ -1.08
SSBP1-213ENST00000496622 HNRNPUQ00839 825 aaKnown RBP eCLIP8.3□□□□□ -1.08
SSBP1-213ENST00000496622 CLTCL1P53675 1640 aa8.3□□□□□ -1.08
SSBP1-213ENST00000496622 FER1L4A9Z1Z3 1794 aa8.3□□□□□ -1.08
SSBP1-213ENST00000496622 CC2D1BQ5T0F9 858 aaKnown RBP8.3□□□□□ -1.08
SSBP1-213ENST00000496622 LHX6Q9UPM6 363 aa8.3□□□□□ -1.08
SSBP1-213ENST00000496622 VWDEQ8N2E2 1590 aa8.29□□□□□ -1.08
SSBP1-213ENST00000496622 NOS1P29475 1434 aa8.29□□□□□ -1.08
SSBP1-213ENST00000496622 MAP3K9P80192 1104 aa8.29□□□□□ -1.08
SSBP1-213ENST00000496622 VARS2Q5ST30 1063 aaKnown RBP8.29□□□□□ -1.08
SSBP1-213ENST00000496622 TRPM2O94759 1503 aa8.29□□□□□ -1.08
SSBP1-213ENST00000496622 CDK11BP21127 795 aaKnown RBP8.29□□□□□ -1.08
SSBP1-213ENST00000496622 PANK3Q9H999 370 aa8.29□□□□□ -1.08
SSBP1-213ENST00000496622 DEPDC5O75140 1603 aa8.29□□□□□ -1.08
SSBP1-213ENST00000496622 DIP2CQ9Y2E4 1556 aa8.28□□□□□ -1.08
SSBP1-213ENST00000496622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.28□□□□□ -1.08
SSBP1-213ENST00000496622 STK26Q9P289 416 aa8.28□□□□□ -1.08
SSBP1-213ENST00000496622 CEBPAP49715 358 aaPredicted RBP8.28□□□□□ -1.08
SSBP1-213ENST00000496622 DDX12PQ92771 950 aa8.28□□□□□ -1.08
SSBP1-213ENST00000496622 HS3ST6Q96QI5 342 aa8.28□□□□□ -1.08
SSBP1-213ENST00000496622 EFCAB6Q5THR3 1501 aa8.27□□□□□ -1.09
SSBP1-213ENST00000496622 GPRASP1Q5JY77 1395 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms