RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	SEPT12	Q8IYM1	358 aa		11.81	□□□□□ -0.52
NVL-223	ENST00000496393	ABCA3	Q99758	1704 aa		11.8	□□□□□ -0.52
NVL-223	ENST00000496393	RGPD8	O14715	1765 aa	Predicted RBP	11.8	□□□□□ -0.52
NVL-223	ENST00000496393	TNS3	Q68CZ2	1445 aa		11.8	□□□□□ -0.52
NVL-223	ENST00000496393		A0A0G2JS52	829 aa		11.8	□□□□□ -0.52
NVL-223	ENST00000496393	MYT1	Q01538	1121 aa		11.8	□□□□□ -0.52
NVL-223	ENST00000496393	LMOD2	Q6P5Q4	547 aa		11.8	□□□□□ -0.52
NVL-223	ENST00000496393	KRT28	Q7Z3Y7	464 aa		11.8	□□□□□ -0.52
NVL-223	ENST00000496393	PSD	A5PKW4	1024 aa	Predicted RBP	11.79	□□□□□ -0.52
NVL-223	ENST00000496393	LRP5	O75197	1615 aa		11.78	□□□□□ -0.52
NVL-223	ENST00000496393	SPATA31E1	Q6ZUB1	1445 aa		11.78	□□□□□ -0.52
NVL-223	ENST00000496393	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.78	□□□□□ -0.52
NVL-223	ENST00000496393	C19orf67	A6NJJ6	358 aa		11.78	□□□□□ -0.52
NVL-223	ENST00000496393	ABCC11	Q96J66	1382 aa		11.78	□□□□□ -0.52
NVL-223	ENST00000496393	PIK3C2G	O75747	1445 aa		11.77	□□□□□ -0.52
NVL-223	ENST00000496393	NWD2	Q9ULI1	1742 aa		11.77	□□□□□ -0.52
NVL-223	ENST00000496393	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
NVL-223	ENST00000496393	VPS72	Q15906	364 aa		11.77	□□□□□ -0.53
NVL-223	ENST00000496393	PHF8	Q9UPP1	1060 aa		11.77	□□□□□ -0.53
NVL-223	ENST00000496393	KRT27	Q7Z3Y8	459 aa		11.76	□□□□□ -0.53
NVL-223	ENST00000496393	ANKRD30B	Q9BXX2	1392 aa		11.76	□□□□□ -0.53
NVL-223	ENST00000496393	NRAP	Q86VF7	1730 aa		11.75	□□□□□ -0.53
NVL-223	ENST00000496393	NRXN1	Q9ULB1	1477 aa		11.75	□□□□□ -0.53
NVL-223	ENST00000496393	FAM98C	Q17RN3	349 aa	Known RBP	11.74	□□□□□ -0.53
NVL-223	ENST00000496393	SBNO1	A3KN83	1393 aa		11.73	□□□□□ -0.53
NVL-223	ENST00000496393	FAM83G	A6ND36	823 aa		11.73	□□□□□ -0.53
NVL-223	ENST00000496393	ARHGEF10	O15013	1369 aa		11.73	□□□□□ -0.53
NVL-223	ENST00000496393	BAG6	P46379	1132 aa		11.73	□□□□□ -0.53
NVL-223	ENST00000496393	PSME1	Q06323	249 aa		11.73	□□□□□ -0.53
NVL-223	ENST00000496393	FAM182B	Q5T319	152 aa		11.73	□□□□□ -0.53
NVL-223	ENST00000496393	PMFBP1	Q8TBY8	1022 aa		11.73	□□□□□ -0.53
NVL-223	ENST00000496393	HRC	P23327	699 aa		11.72	□□□□□ -0.53
NVL-223	ENST00000496393	CFAP70	Q5T0N1	1121 aa		11.72	□□□□□ -0.53
NVL-223	ENST00000496393	PRAM1	Q96QH2	718 aa		11.72	□□□□□ -0.53
NVL-223	ENST00000496393	ONECUT3	O60422	494 aa	Predicted RBP	11.71	□□□□□ -0.53
NVL-223	ENST00000496393	PRR29	P0C7W0	189 aa		11.71	□□□□□ -0.53
NVL-223	ENST00000496393	EN1	Q05925	392 aa	Predicted RBP	11.71	□□□□□ -0.53
NVL-223	ENST00000496393	MPHOSPH9	Q99550	1183 aa		11.71	□□□□□ -0.53
NVL-223	ENST00000496393	BTG4	Q9NY30	223 aa		11.71	□□□□□ -0.53
NVL-223	ENST00000496393	RGPD1	P0DJD0	1748 aa		11.71	□□□□□ -0.54
NVL-223	ENST00000496393	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.71	□□□□□ -0.54
NVL-223	ENST00000496393	COL14A1	Q05707	1796 aa	Known RBP	11.69	□□□□□ -0.54
NVL-223	ENST00000496393	DHX57	Q6P158	1386 aa	Known RBP	11.69	□□□□□ -0.54
NVL-223	ENST00000496393	GABBR2	O75899	941 aa		11.69	□□□□□ -0.54
NVL-223	ENST00000496393	R3HDM1	Q15032	1099 aa	Known RBP	11.69	□□□□□ -0.54
NVL-223	ENST00000496393	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.69	□□□□□ -0.54
NVL-223	ENST00000496393	C14orf93	Q9H972	538 aa	Known RBP	11.69	□□□□□ -0.54
NVL-223	ENST00000496393	POGK	Q9P215	609 aa		11.69	□□□□□ -0.54
NVL-223	ENST00000496393	TNS1	Q9HBL0	1735 aa	Known RBP	11.69	□□□□□ -0.54
NVL-223	ENST00000496393	ALS2	Q96Q42	1657 aa		11.68	□□□□□ -0.54
NVL-223	ENST00000496393	SIRT1	Q96EB6	747 aa		11.68	□□□□□ -0.54
NVL-223	ENST00000496393	ANKAR	Q7Z5J8	1434 aa		11.68	□□□□□ -0.54
NVL-223	ENST00000496393	ADGRB2	O60241	1585 aa		11.67	□□□□□ -0.54
NVL-223	ENST00000496393	THSD7A	Q9UPZ6	1657 aa		11.67	□□□□□ -0.54
NVL-223	ENST00000496393	CRYBG1	Q9Y4K1	1723 aa		11.66	□□□□□ -0.54
NVL-223	ENST00000496393	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.66	□□□□□ -0.54
NVL-223	ENST00000496393	PRR36	Q9H6K5	1346 aa		11.66	□□□□□ -0.54
NVL-223	ENST00000496393	GPRASP1	Q5JY77	1395 aa		11.66	□□□□□ -0.54
NVL-223	ENST00000496393	DLC1	Q96QB1	1528 aa		11.65	□□□□□ -0.54
NVL-223	ENST00000496393	SPATA31A5	Q5VU36	1347 aa		11.65	□□□□□ -0.54
NVL-223	ENST00000496393	SPATA31A7	Q8IWB4	1347 aa		11.65	□□□□□ -0.54
NVL-223	ENST00000496393	ACIN1	Q9UKV3	1341 aa	Known RBP	11.65	□□□□□ -0.54
NVL-223	ENST00000496393	PAK3	O75914	559 aa	Predicted RBP	11.65	□□□□□ -0.54
NVL-223	ENST00000496393	EZH2	Q15910	746 aa	Known RBP	11.65	□□□□□ -0.54
NVL-223	ENST00000496393	PRDM11	Q9NQV5	511 aa		11.65	□□□□□ -0.54
NVL-223	ENST00000496393	TRAK1	Q9UPV9	953 aa		11.65	□□□□□ -0.54
NVL-223	ENST00000496393	ADGRB1	O14514	1584 aa		11.64	□□□□□ -0.55
NVL-223	ENST00000496393	TULP4	Q9NRJ4	1543 aa		11.64	□□□□□ -0.55
NVL-223	ENST00000496393	TRIM37	O94972	964 aa		11.63	□□□□□ -0.55
NVL-223	ENST00000496393	CHRNA2	Q15822	529 aa		11.63	□□□□□ -0.55
NVL-223	ENST00000496393	NGDN	Q8NEJ9	315 aa	Known RBP	11.63	□□□□□ -0.55
NVL-223	ENST00000496393	STRN4	Q9NRL3	753 aa		11.63	□□□□□ -0.55
NVL-223	ENST00000496393	KIAA0232	Q92628	1395 aa		11.63	□□□□□ -0.55
NVL-223	ENST00000496393	DISP2	A7MBM2	1401 aa		11.62	□□□□□ -0.55
NVL-223	ENST00000496393	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.62	□□□□□ -0.55
NVL-223	ENST00000496393	USP35	Q9P2H5	1018 aa		11.62	□□□□□ -0.55
NVL-223	ENST00000496393	NUTM2G	Q5VZR2	741 aa		11.61	□□□□□ -0.55
NVL-223	ENST00000496393	EIF3A	Q14152	1382 aa	Known RBP	11.6	□□□□□ -0.55
NVL-223	ENST00000496393	WASL	O00401	505 aa	Predicted RBP	11.6	□□□□□ -0.55
NVL-223	ENST00000496393	SPATA31A1	Q5TZJ5	1347 aa		11.6	□□□□□ -0.55
NVL-223	ENST00000496393	APBA3	O96018	575 aa		11.59	□□□□□ -0.55
NVL-223	ENST00000496393	ZC3H6	P61129	1189 aa	Known RBP	11.59	□□□□□ -0.55
NVL-223	ENST00000496393	CAMKK2	Q96RR4	588 aa		11.59	□□□□□ -0.55
NVL-223	ENST00000496393	KDM2A	Q9Y2K7	1162 aa		11.59	□□□□□ -0.55
NVL-223	ENST00000496393	NUP188	Q5SRE5	1749 aa		11.59	□□□□□ -0.55
NVL-223	ENST00000496393	RREB1	Q92766	1687 aa		11.59	□□□□□ -0.55
NVL-223	ENST00000496393	ATP7B	P35670	1465 aa		11.58	□□□□□ -0.56
NVL-223	ENST00000496393	ITSN1	Q15811	1721 aa		11.58	□□□□□ -0.56
NVL-223	ENST00000496393	FAM196A	Q6ZSG2	479 aa		11.58	□□□□□ -0.56
NVL-223	ENST00000496393	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.57	□□□□□ -0.56
NVL-223	ENST00000496393	YY1	P25490	414 aa		11.56	□□□□□ -0.56
NVL-223	ENST00000496393	SSH2	Q76I76	1423 aa		11.56	□□□□□ -0.56
NVL-223	ENST00000496393	NRK	Q7Z2Y5	1582 aa		11.56	□□□□□ -0.56
NVL-223	ENST00000496393	PARD3	Q8TEW0	1356 aa		11.55	□□□□□ -0.56
NVL-223	ENST00000496393	EVA1C	P58658	441 aa		11.55	□□□□□ -0.56
NVL-223	ENST00000496393	PDE3B	Q13370	1112 aa		11.55	□□□□□ -0.56
NVL-223	ENST00000496393	LARP1	Q6PKG0	1096 aa	Known RBP	11.55	□□□□□ -0.56
NVL-223	ENST00000496393	NUDT16	Q96DE0	195 aa	Known RBP	11.55	□□□□□ -0.56
NVL-223	ENST00000496393	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.55	□□□□□ -0.56
NVL-223	ENST00000496393	DCAF11	Q8TEB1	546 aa		11.54	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms