RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 PRR20EP86478 221 aa11.47□□□□□ -0.57
NCKAP1-208ENST00000495619 PRR20CP86479 221 aa11.47□□□□□ -0.57
NCKAP1-208ENST00000495619 PRR20DP86480 221 aa11.47□□□□□ -0.57
NCKAP1-208ENST00000495619 PRR20BP86481 221 aa11.47□□□□□ -0.57
NCKAP1-208ENST00000495619 PRR20AP86496 221 aa11.47□□□□□ -0.57
NCKAP1-208ENST00000495619 GPKOWQ92917 476 aaPredicted RBP eCLIP11.47□□□□□ -0.574e-7■□□□□ 8.7
NCKAP1-208ENST00000495619 ZNF511Q8NB15 262 aa11.46□□□□□ -0.57
NCKAP1-208ENST00000495619 NRG2O14511 850 aaPredicted RBP11.45□□□□□ -0.58
NCKAP1-208ENST00000495619 AGERQ15109 404 aa11.45□□□□□ -0.58
NCKAP1-208ENST00000495619 LINC01559Q495D7 138 aa11.45□□□□□ -0.58
NCKAP1-208ENST00000495619 RC3H1Q5TC82 1133 aaKnown RBP11.45□□□□□ -0.58
NCKAP1-208ENST00000495619 EHBP1Q8NDI1 1231 aa11.45□□□□□ -0.58
NCKAP1-208ENST00000495619 GDF9O60383 454 aa11.44□□□□□ -0.58
NCKAP1-208ENST00000495619 SH3BP2P78314 561 aa11.44□□□□□ -0.58
NCKAP1-208ENST00000495619 CYP4X1Q8N118 509 aa11.44□□□□□ -0.58
NCKAP1-208ENST00000495619 PRM3Q9NNZ6 103 aa11.44□□□□□ -0.58
NCKAP1-208ENST00000495619 ZC3H4Q9UPT8 1303 aaKnown RBP11.43□□□□□ -0.58
NCKAP1-208ENST00000495619 TNFRSF10AO00220 468 aa11.43□□□□□ -0.58
NCKAP1-208ENST00000495619 NR6A1Q15406 480 aa11.43□□□□□ -0.58
NCKAP1-208ENST00000495619 BPHLQ86WA6 291 aaPredicted RBP11.43□□□□□ -0.58
NCKAP1-208ENST00000495619 FKBPLQ9UIM3 349 aa11.43□□□□□ -0.58
NCKAP1-208ENST00000495619 TTC24A2A3L6 582 aaPredicted RBP11.42□□□□□ -0.58
NCKAP1-208ENST00000495619 PKD2L1Q9P0L9 805 aa11.42□□□□□ -0.58
NCKAP1-208ENST00000495619 VARSP26640 1264 aaKnown RBP11.41□□□□□ -0.58
NCKAP1-208ENST00000495619 SKOR1P84550 965 aa11.41□□□□□ -0.58
NCKAP1-208ENST00000495619 SOCS7O14512 581 aa11.4□□□□□ -0.58
NCKAP1-208ENST00000495619 SNIP1Q8TAD8 396 aaKnown RBP11.4□□□□□ -0.58
NCKAP1-208ENST00000495619 MRGPRX2Q96LB1 330 aa11.4□□□□□ -0.58
NCKAP1-208ENST00000495619 TRIM67Q6ZTA4 783 aa11.39□□□□□ -0.59
NCKAP1-208ENST00000495619 FAM174AQ8TBP5 190 aa11.39□□□□□ -0.59
NCKAP1-208ENST00000495619 PDXDC2PQ6P474 469 aa11.38□□□□□ -0.59
NCKAP1-208ENST00000495619 HMX1Q9NP08 348 aaPredicted RBP11.38□□□□□ -0.59
NCKAP1-208ENST00000495619 PTK2Q05397 1052 aa11.37□□□□□ -0.59
NCKAP1-208ENST00000495619 PKDCCQ504Y2 493 aa11.37□□□□□ -0.59
NCKAP1-208ENST00000495619 GPSM3Q9Y4H4 160 aa11.36□□□□□ -0.59
NCKAP1-208ENST00000495619 DGAT1O75907 488 aa11.35□□□□□ -0.59
NCKAP1-208ENST00000495619 Q6ZNB5 142 aa11.35□□□□□ -0.59
NCKAP1-208ENST00000495619 FOXJ1Q92949 421 aa11.35□□□□□ -0.59
NCKAP1-208ENST00000495619 ARHGAP9Q9BRR9 750 aa11.35□□□□□ -0.59
NCKAP1-208ENST00000495619 TOR4AQ9NXH8 423 aa11.35□□□□□ -0.59
NCKAP1-208ENST00000495619 NDUFB9Q9Y6M9 179 aa11.35□□□□□ -0.59
NCKAP1-208ENST00000495619 FAM187AA6NFU0 413 aa11.34□□□□□ -0.59
NCKAP1-208ENST00000495619 ZBTB33Q86T24 672 aa11.34□□□□□ -0.59
NCKAP1-208ENST00000495619 MAGEB6P1A0A0J9YX57 407 aa11.33□□□□□ -0.6
NCKAP1-208ENST00000495619 SNRKQ9NRH2 765 aa11.33□□□□□ -0.6
NCKAP1-208ENST00000495619 WASF2Q9Y6W5 498 aa11.33□□□□□ -0.6
NCKAP1-208ENST00000495619 ALDH1A1P00352 501 aa11.32□□□□□ -0.6
NCKAP1-208ENST00000495619 FLIIQ13045 1269 aa11.32□□□□□ -0.6
NCKAP1-208ENST00000495619 SH3BP5LQ7L8J4 393 aa11.32□□□□□ -0.6
NCKAP1-208ENST00000495619 MPNDQ8N594 471 aa11.32□□□□□ -0.6
NCKAP1-208ENST00000495619 MTMR14Q8NCE2 650 aa11.32□□□□□ -0.6
NCKAP1-208ENST00000495619 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
NCKAP1-208ENST00000495619 TRIM34Q9BYJ4 488 aa11.32□□□□□ -0.6
NCKAP1-208ENST00000495619 GJD4Q96KN9 370 aaPredicted RBP11.31□□□□□ -0.6
NCKAP1-208ENST00000495619 CARD14Q9BXL6 1004 aa11.31□□□□□ -0.6
NCKAP1-208ENST00000495619 SIAH2O43255 324 aa11.3□□□□□ -0.6
NCKAP1-208ENST00000495619 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
NCKAP1-208ENST00000495619 ARID5BQ14865 1188 aa11.29□□□□□ -0.6
NCKAP1-208ENST00000495619 ZNF592Q92610 1267 aa11.29□□□□□ -0.6
NCKAP1-208ENST00000495619 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
NCKAP1-208ENST00000495619 CDV3Q9UKY7 258 aaKnown RBP11.28□□□□□ -0.6
NCKAP1-208ENST00000495619 SLC10A4Q96EP9 437 aa11.27□□□□□ -0.61
NCKAP1-208ENST00000495619 ZBBXA8MT70 800 aa11.26□□□□□ -0.61
NCKAP1-208ENST00000495619 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
NCKAP1-208ENST00000495619 C1QTNF2Q9BXJ5 285 aa11.26□□□□□ -0.61
NCKAP1-208ENST00000495619 J3QL48 77 aa11.25□□□□□ -0.61
NCKAP1-208ENST00000495619 SMPD1P17405 629 aa11.25□□□□□ -0.61
NCKAP1-208ENST00000495619 MCM6Q14566 821 aa11.25□□□□□ -0.61
NCKAP1-208ENST00000495619 ERFEQ4G0M1 354 aa11.25□□□□□ -0.61
NCKAP1-208ENST00000495619 C4orf48Q5BLP8 95 aa11.25□□□□□ -0.61
NCKAP1-208ENST00000495619 WWC1Q8IX03 1113 aa11.25□□□□□ -0.61
NCKAP1-208ENST00000495619 CDK15Q96Q40 435 aa11.25□□□□□ -0.61
NCKAP1-208ENST00000495619 TLL2Q9Y6L7 1015 aa11.25□□□□□ -0.61
NCKAP1-208ENST00000495619 RAD21O60216 631 aa11.24□□□□□ -0.61
NCKAP1-208ENST00000495619 ADH1CP00326 375 aa11.24□□□□□ -0.61
NCKAP1-208ENST00000495619 TRAF7Q6Q0C0 670 aa11.24□□□□□ -0.61
NCKAP1-208ENST00000495619 VASH1Q7L8A9 365 aaPredicted RBP11.24□□□□□ -0.61
NCKAP1-208ENST00000495619 DZIP3Q86Y13 1208 aaKnown RBP11.24□□□□□ -0.61
NCKAP1-208ENST00000495619 ADAM32Q8TC27 787 aa11.24□□□□□ -0.61
NCKAP1-208ENST00000495619 MAP4K5Q9Y4K4 846 aa11.24□□□□□ -0.61
NCKAP1-208ENST00000495619 NR5A1Q13285 461 aa11.23□□□□□ -0.61
NCKAP1-208ENST00000495619 CTC1Q2NKJ3 1217 aa11.23□□□□□ -0.61
NCKAP1-208ENST00000495619 MCCD1P59942 119 aaPredicted RBP11.22□□□□□ -0.61
NCKAP1-208ENST00000495619 AVPP01185 164 aa11.21□□□□□ -0.61
NCKAP1-208ENST00000495619 NR1H3Q13133 447 aa11.21□□□□□ -0.61
NCKAP1-208ENST00000495619 NBPF20Q3BBV1 942 aa11.21□□□□□ -0.61
NCKAP1-208ENST00000495619 TRIM52Q96A61 297 aa11.21□□□□□ -0.61
NCKAP1-208ENST00000495619 TBC1D2BQ9UPU7 963 aa11.21□□□□□ -0.61
NCKAP1-208ENST00000495619 UBTFP17480 764 aaKnown RBP11.2□□□□□ -0.62
NCKAP1-208ENST00000495619 NNTQ13423 1086 aa11.19□□□□□ -0.62
NCKAP1-208ENST00000495619 AXIN1O15169 862 aa11.18□□□□□ -0.62
NCKAP1-208ENST00000495619 ABL2P42684 1182 aa11.18□□□□□ -0.62
NCKAP1-208ENST00000495619 MYT1Q01538 1121 aa11.18□□□□□ -0.62
NCKAP1-208ENST00000495619 GDPD2Q9HCC8 539 aa11.18□□□□□ -0.62
NCKAP1-208ENST00000495619 FBXO45P0C2W1 286 aa11.17□□□□□ -0.62
NCKAP1-208ENST00000495619 DHX9Q08211 1270 aaKnown RBP11.17□□□□□ -0.62
NCKAP1-208ENST00000495619 WASHC4Q2M389 1173 aa11.17□□□□□ -0.62
NCKAP1-208ENST00000495619 HPS1Q92902 700 aa11.17□□□□□ -0.62
NCKAP1-208ENST00000495619 KCTD15Q96SI1 283 aaPredicted RBP11.17□□□□□ -0.62
NCKAP1-208ENST00000495619 PCDHB9Q9Y5E1 797 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms