RNA–Protein interactions for RNA: ENST00000495571.5

VWA3B-220, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 2,711 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-220ENST00000495571 SECISBP2LQ93073 1101 aaKnown RBP10.64□□□□□ -0.71
VWA3B-220ENST00000495571 WDR43Q15061 677 aaKnown RBP eCLIP10.64□□□□□ -0.71
VWA3B-220ENST00000495571 ZNF771Q7L3S4 317 aaPredicted RBP10.64□□□□□ -0.71
VWA3B-220ENST00000495571 GPT2Q8TD30 523 aa10.64□□□□□ -0.71
VWA3B-220ENST00000495571 CGNL1Q0VF96 1302 aa10.63□□□□□ -0.71
VWA3B-220ENST00000495571 ARHGEF40Q8TER5 1519 aa10.63□□□□□ -0.71
VWA3B-220ENST00000495571 HECW2Q9P2P5 1572 aa10.63□□□□□ -0.71
VWA3B-220ENST00000495571 INO80Q9ULG1 1556 aaPredicted RBP10.63□□□□□ -0.71
VWA3B-220ENST00000495571 PPP2R1AP30153 589 aa10.63□□□□□ -0.71
VWA3B-220ENST00000495571 ZNF445P59923 1031 aa10.63□□□□□ -0.71
VWA3B-220ENST00000495571 NKTRP30414 1462 aaKnown RBP10.63□□□□□ -0.71
VWA3B-220ENST00000495571 MLH3Q9UHC1 1453 aa10.63□□□□□ -0.71
VWA3B-220ENST00000495571 DNMT1P26358 1616 aaKnown RBP10.63□□□□□ -0.71
VWA3B-220ENST00000495571 SYCE3A1L190 88 aa10.63□□□□□ -0.71
VWA3B-220ENST00000495571 HS1BP3Q53T59 392 aa10.63□□□□□ -0.71
VWA3B-220ENST00000495571 CSPP1Q1MSJ5 1256 aa10.62□□□□□ -0.71
VWA3B-220ENST00000495571 LMBRD1Q9NUN5 540 aa10.62□□□□□ -0.71
VWA3B-220ENST00000495571 RALGAPBQ86X10 1494 aa10.62□□□□□ -0.71
VWA3B-220ENST00000495571 ADGBQ8N7X0 1667 aa10.62□□□□□ -0.71
VWA3B-220ENST00000495571 CAPN2P17655 700 aa10.62□□□□□ -0.71
VWA3B-220ENST00000495571 CFDP1Q9UEE9 299 aaPredicted RBP10.62□□□□□ -0.71
VWA3B-220ENST00000495571 PLXNC1O60486 1568 aa10.61□□□□□ -0.71
VWA3B-220ENST00000495571 SYCP2Q9BX26 1530 aa10.61□□□□□ -0.71
VWA3B-220ENST00000495571 CCDC141Q6ZP82 1450 aa10.61□□□□□ -0.71
VWA3B-220ENST00000495571 NEUROD2Q15784 382 aa10.61□□□□□ -0.71
VWA3B-220ENST00000495571 TTC12Q9H892 705 aaPredicted RBP10.61□□□□□ -0.71
VWA3B-220ENST00000495571 TMEM63CQ9P1W3 806 aa10.61□□□□□ -0.71
VWA3B-220ENST00000495571 CDK11BP21127 795 aaKnown RBP10.61□□□□□ -0.71
VWA3B-220ENST00000495571 PDE3AQ14432 1141 aa10.61□□□□□ -0.71
VWA3B-220ENST00000495571 NAA30Q147X3 362 aaPredicted RBP10.61□□□□□ -0.71
VWA3B-220ENST00000495571 FOXD4L5Q5VV16 416 aaPredicted RBP10.61□□□□□ -0.71
VWA3B-220ENST00000495571 FOXD4L4Q8WXT5 416 aaPredicted RBP10.61□□□□□ -0.71
VWA3B-220ENST00000495571 SCAPERQ9BY12 1400 aa10.6□□□□□ -0.71
VWA3B-220ENST00000495571 PRPF40AO75400 957 aaKnown RBP10.6□□□□□ -0.71
VWA3B-220ENST00000495571 RRP7AQ9Y3A4 280 aaKnown RBP10.6□□□□□ -0.71
VWA3B-220ENST00000495571 MLECQ14165 292 aa10.6□□□□□ -0.71
VWA3B-220ENST00000495571 PDCL2Q8N4E4 241 aa10.6□□□□□ -0.71
VWA3B-220ENST00000495571 ZFYVE16Q7Z3T8 1539 aa10.59□□□□□ -0.71
VWA3B-220ENST00000495571 ARHGEF12Q9NZN5 1544 aa10.59□□□□□ -0.71
VWA3B-220ENST00000495571 SNX21Q969T3 373 aa10.58□□□□□ -0.72
VWA3B-220ENST00000495571 FAM135AQ9P2D6 1515 aa10.58□□□□□ -0.72
VWA3B-220ENST00000495571 RBM25P49756 843 aaKnown RBP10.58□□□□□ -0.72
VWA3B-220ENST00000495571 KIAA2012Q0VF49 1180 aa10.58□□□□□ -0.72
VWA3B-220ENST00000495571 PMFBP1Q8TBY8 1022 aa10.58□□□□□ -0.72
VWA3B-220ENST00000495571 TESK2Q96S53 571 aa10.58□□□□□ -0.72
VWA3B-220ENST00000495571 KIDINS220Q9ULH0 1771 aa10.58□□□□□ -0.72
VWA3B-220ENST00000495571 ABCC5O15440 1437 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 PTMAP06454 111 aaKnown RBP10.57□□□□□ -0.72
VWA3B-220ENST00000495571 SLFN14P0C7P3 912 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 NOLC1Q14978 699 aaKnown RBP eCLIP10.57□□□□□ -0.72
VWA3B-220ENST00000495571 DHX37Q8IY37 1157 aaKnown RBP10.57□□□□□ -0.72
VWA3B-220ENST00000495571 CCDC39Q9UFE4 941 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 KIF3AQ9Y496 699 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 IBTKQ9P2D0 1353 aaPredicted RBP10.57□□□□□ -0.72
VWA3B-220ENST00000495571 ADGRL2O95490 1459 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 COL17A1Q9UMD9 1497 aaPredicted RBP10.57□□□□□ -0.72
VWA3B-220ENST00000495571 ATP7AQ04656 1500 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 ERICH4A6NGS2 130 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 GTF2F1P35269 517 aaKnown RBP eCLIP10.57□□□□□ -0.72
VWA3B-220ENST00000495571 RARSP54136 660 aaKnown RBP10.57□□□□□ -0.72
VWA3B-220ENST00000495571 NGEFQ8N5V2 710 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 CIZ1Q9ULV3 898 aaPredicted RBP10.57□□□□□ -0.72
VWA3B-220ENST00000495571 EIF2AK4Q9P2K8 1649 aaKnown RBP10.57□□□□□ -0.72
VWA3B-220ENST00000495571 DAPK1P53355 1430 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 UHRF1BP1Q6BDS2 1440 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 AGLP35573 1532 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
VWA3B-220ENST00000495571 RGL3Q3MIN7 710 aa10.57□□□□□ -0.72
VWA3B-220ENST00000495571 TPRNQ4KMQ1 711 aa10.56□□□□□ -0.72
VWA3B-220ENST00000495571 RGS22Q8NE09 1264 aa10.56□□□□□ -0.72
VWA3B-220ENST00000495571 INSRP06213 1382 aa10.56□□□□□ -0.72
VWA3B-220ENST00000495571 DIP2CQ9Y2E4 1556 aa10.56□□□□□ -0.72
VWA3B-220ENST00000495571 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
VWA3B-220ENST00000495571 K7ELQ4 463 aaPredicted RBP10.56□□□□□ -0.72
VWA3B-220ENST00000495571 TRIM34Q9BYJ4 488 aa10.56□□□□□ -0.72
VWA3B-220ENST00000495571 ST7Q9NRC1 585 aa10.56□□□□□ -0.72
VWA3B-220ENST00000495571 ZGPATQ8N5A5 531 aaKnown RBP10.55□□□□□ -0.72
VWA3B-220ENST00000495571 RWDD1Q9H446 243 aaPredicted RBP10.55□□□□□ -0.72
VWA3B-220ENST00000495571 ABCA6Q8N139 1617 aa10.55□□□□□ -0.72
VWA3B-220ENST00000495571 HNRNPMP52272 730 aaKnown RBP eCLIP10.55□□□□□ -0.72
VWA3B-220ENST00000495571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.55□□□□□ -0.72
VWA3B-220ENST00000495571 ZDHHC9Q9Y397 364 aa10.55□□□□□ -0.72
VWA3B-220ENST00000495571 TRAPPC8Q9Y2L5 1435 aa10.55□□□□□ -0.72
VWA3B-220ENST00000495571 MCM5P33992 734 aa10.54□□□□□ -0.72
VWA3B-220ENST00000495571 HMGN5P82970 282 aaKnown RBP10.54□□□□□ -0.72
VWA3B-220ENST00000495571 LNPKQ9C0E8 428 aa10.54□□□□□ -0.72
VWA3B-220ENST00000495571 C9orf84Q5VXU9 1444 aa10.54□□□□□ -0.72
VWA3B-220ENST00000495571 LRSAM1Q6UWE0 723 aa10.54□□□□□ -0.72
VWA3B-220ENST00000495571 ATP10AO60312 1499 aa10.54□□□□□ -0.72
VWA3B-220ENST00000495571 ROCK1Q13464 1354 aa10.53□□□□□ -0.72
VWA3B-220ENST00000495571 GOLGA6L22H0YM25 854 aa10.53□□□□□ -0.72
VWA3B-220ENST00000495571 FOXD4L6Q3SYB3 417 aaPredicted RBP10.53□□□□□ -0.72
VWA3B-220ENST00000495571 FOXD4L3Q6VB84 417 aaPredicted RBP10.53□□□□□ -0.72
VWA3B-220ENST00000495571 WWC1Q8IX03 1113 aa10.53□□□□□ -0.72
VWA3B-220ENST00000495571 ANKRD7Q92527 254 aa10.53□□□□□ -0.72
VWA3B-220ENST00000495571 CLEC17AQ6ZS10 378 aa10.53□□□□□ -0.72
VWA3B-220ENST00000495571 PIBF1Q8WXW3 757 aa10.53□□□□□ -0.72
VWA3B-220ENST00000495571 IRX3P78415 501 aaPredicted RBP10.52□□□□□ -0.72
VWA3B-220ENST00000495571 PRIMPOLQ96LW4 560 aa10.52□□□□□ -0.72
VWA3B-220ENST00000495571 SLC52A1Q9NWF4 448 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms