RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 K7ELQ4 463 aaPredicted RBP5.93□□□□□ -1.46
PRKD3-210ENST00000494667 TARBP1Q13395 1621 aaKnown RBP5.93□□□□□ -1.46
PRKD3-210ENST00000494667 CCDC66A2RUB6 948 aa5.93□□□□□ -1.46
PRKD3-210ENST00000494667 NUCB2P80303 420 aa5.93□□□□□ -1.46
PRKD3-210ENST00000494667 PCDHB15Q9Y5E8 787 aa5.93□□□□□ -1.46
PRKD3-210ENST00000494667 RAD54L2Q9Y4B4 1467 aa5.93□□□□□ -1.46
PRKD3-210ENST00000494667 IRX5P78411 483 aaPredicted RBP5.93□□□□□ -1.46
PRKD3-210ENST00000494667 PRDM10Q9NQV6 1147 aa5.93□□□□□ -1.46
PRKD3-210ENST00000494667 MORC2Q9Y6X9 1032 aaPredicted RBP5.93□□□□□ -1.46
PRKD3-210ENST00000494667 CWC22Q9HCG8 908 aaKnown RBP5.92□□□□□ -1.46
PRKD3-210ENST00000494667 SLFN14P0C7P3 912 aa5.92□□□□□ -1.46
PRKD3-210ENST00000494667 CFAP44Q96MT7 982 aa5.92□□□□□ -1.46
PRKD3-210ENST00000494667 CHIC2Q9UKJ5 165 aa5.92□□□□□ -1.46
PRKD3-210ENST00000494667 BCAR3O75815 825 aa5.92□□□□□ -1.46
PRKD3-210ENST00000494667 FAM184AQ8NB25 1140 aa5.92□□□□□ -1.46
PRKD3-210ENST00000494667 ANKRD36BQ8N2N9 1353 aa5.92□□□□□ -1.46
PRKD3-210ENST00000494667 RARSP54136 660 aaKnown RBP5.91□□□□□ -1.46
PRKD3-210ENST00000494667 BMP2KLQ5H9B9 411 aa5.91□□□□□ -1.46
PRKD3-210ENST00000494667 WDR63Q8IWG1 891 aa5.91□□□□□ -1.46
PRKD3-210ENST00000494667 EFCC1Q9HA90 598 aa5.91□□□□□ -1.46
PRKD3-210ENST00000494667 ZC3H13Q5T200 1668 aaKnown RBP5.91□□□□□ -1.46
PRKD3-210ENST00000494667 DISP1Q96F81 1524 aa5.91□□□□□ -1.46
PRKD3-210ENST00000494667 PKD2Q13563 968 aa5.91□□□□□ -1.46
PRKD3-210ENST00000494667 WDR43Q15061 677 aaKnown RBP eCLIP5.91□□□□□ -1.46
PRKD3-210ENST00000494667 P3H3Q8IVL6 736 aa5.91□□□□□ -1.46
PRKD3-210ENST00000494667 SPINK5Q9NQ38 1064 aaPredicted RBP5.91□□□□□ -1.46
PRKD3-210ENST00000494667 TPM3P06753 285 aa5.91□□□□□ -1.46
PRKD3-210ENST00000494667 RGS22Q8NE09 1264 aa5.91□□□□□ -1.46
PRKD3-210ENST00000494667 BCL2L12Q9HB09 334 aa5.91□□□□□ -1.46
PRKD3-210ENST00000494667 GEMIN8Q9NWZ8 242 aaKnown RBP5.91□□□□□ -1.46
PRKD3-210ENST00000494667 TUBGCP6Q96RT7 1819 aa5.91□□□□□ -1.46
PRKD3-210ENST00000494667 MBD3O95983 291 aa5.9□□□□□ -1.46
PRKD3-210ENST00000494667 DIAPH3Q9NSV4 1193 aa5.9□□□□□ -1.46
PRKD3-210ENST00000494667 DDX41Q9UJV9 622 aaKnown RBP5.9□□□□□ -1.46
PRKD3-210ENST00000494667 MVPQ14764 893 aaKnown RBP5.9□□□□□ -1.46
PRKD3-210ENST00000494667 DDX49Q9Y6V7 483 aaKnown RBP5.9□□□□□ -1.46
PRKD3-210ENST00000494667 PDS5BQ9NTI5 1447 aa5.9□□□□□ -1.46
PRKD3-210ENST00000494667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.9□□□□□ -1.47
PRKD3-210ENST00000494667 NOS1P29475 1434 aa5.9□□□□□ -1.47
PRKD3-210ENST00000494667 PRIM1P49642 420 aaKnown RBP5.9□□□□□ -1.47
PRKD3-210ENST00000494667 TMF1P82094 1093 aa5.9□□□□□ -1.47
PRKD3-210ENST00000494667 IL17RAQ96F46 866 aa5.9□□□□□ -1.47
PRKD3-210ENST00000494667 CALCOCO1Q9P1Z2 691 aa5.9□□□□□ -1.47
PRKD3-210ENST00000494667 CTNNA3Q9UI47 895 aa5.9□□□□□ -1.47
PRKD3-210ENST00000494667 IFT140Q96RY7 1462 aa5.89□□□□□ -1.47
PRKD3-210ENST00000494667 NOLC1Q14978 699 aaKnown RBP eCLIP5.89□□□□□ -1.47
PRKD3-210ENST00000494667 TIGD1Q96MW7 591 aa5.89□□□□□ -1.47
PRKD3-210ENST00000494667 C9orf84Q5VXU9 1444 aa5.89□□□□□ -1.47
PRKD3-210ENST00000494667 PIK3R4Q99570 1358 aa5.89□□□□□ -1.47
PRKD3-210ENST00000494667 SSFA2P28290 1259 aa5.89□□□□□ -1.47
PRKD3-210ENST00000494667 CBX1P83916 185 aa5.89□□□□□ -1.47
PRKD3-210ENST00000494667 NUCB1Q02818 461 aa5.89□□□□□ -1.47
PRKD3-210ENST00000494667 SLFNL1Q499Z3 407 aa5.89□□□□□ -1.47
PRKD3-210ENST00000494667 RNF216Q9NWF9 866 aaPredicted RBP5.89□□□□□ -1.47
PRKD3-210ENST00000494667 BRD2P25440 801 aaKnown RBP5.88□□□□□ -1.47
PRKD3-210ENST00000494667 MFAP1P55081 439 aaKnown RBP5.88□□□□□ -1.47
PRKD3-210ENST00000494667 IRX3P78415 501 aaPredicted RBP5.88□□□□□ -1.47
PRKD3-210ENST00000494667 TERF2Q15554 542 aa5.88□□□□□ -1.47
PRKD3-210ENST00000494667 SENP3Q9H4L4 574 aaPredicted RBP5.88□□□□□ -1.47
PRKD3-210ENST00000494667 USP25Q9UHP3 1055 aa5.88□□□□□ -1.47
PRKD3-210ENST00000494667 IFT172Q9UG01 1749 aa5.88□□□□□ -1.47
PRKD3-210ENST00000494667 ERCC6Q03468 1493 aa5.88□□□□□ -1.47
PRKD3-210ENST00000494667 GPT2Q8TD30 523 aa5.88□□□□□ -1.47
PRKD3-210ENST00000494667 CGNQ9P2M7 1197 aaKnown RBP5.88□□□□□ -1.47
PRKD3-210ENST00000494667 COG6Q9Y2V7 657 aa5.88□□□□□ -1.47
PRKD3-210ENST00000494667 SBNO2Q9Y2G9 1366 aa5.88□□□□□ -1.47
PRKD3-210ENST00000494667 BRPF1P55201 1214 aaPredicted RBP5.88□□□□□ -1.47
PRKD3-210ENST00000494667 RABEP1Q15276 862 aa5.88□□□□□ -1.47
PRKD3-210ENST00000494667 WWC1Q8IX03 1113 aa5.88□□□□□ -1.47
PRKD3-210ENST00000494667 TMEM87AQ8NBN3 555 aa5.88□□□□□ -1.47
PRKD3-210ENST00000494667 PANK1Q8TE04 598 aa5.88□□□□□ -1.47
PRKD3-210ENST00000494667 PREX2Q70Z35 1606 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 ABCA9Q8IUA7 1624 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 AXDND1Q5T1B0 1012 aaPredicted RBP5.87□□□□□ -1.47
PRKD3-210ENST00000494667 CDC42BPBQ9Y5S2 1711 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 RLBP1P12271 317 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 MUM1L1Q5H9M0 696 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 GAS2L2Q8NHY3 880 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 KIAA1524Q8TCG1 905 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 ATP1B4Q9UN42 357 aaPredicted RBP5.87□□□□□ -1.47
PRKD3-210ENST00000494667 PPIP5K1Q6PFW1 1433 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 URB2Q14146 1524 aaKnown RBP5.87□□□□□ -1.47
PRKD3-210ENST00000494667 CAPN2P17655 700 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 CTR9Q6PD62 1173 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 ZNF518AQ6AHZ1 1483 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 ABCA8O94911 1581 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 CDC42BPGQ6DT37 1551 aa5.87□□□□□ -1.47
PRKD3-210ENST00000494667 TRPM2O94759 1503 aa5.86□□□□□ -1.47
PRKD3-210ENST00000494667 ABCC11Q96J66 1382 aa5.86□□□□□ -1.47
PRKD3-210ENST00000494667 PSEN1P49768 467 aa5.86□□□□□ -1.47
PRKD3-210ENST00000494667 DNTTIP2Q5QJE6 756 aaKnown RBP5.86□□□□□ -1.47
PRKD3-210ENST00000494667 TMEM63CQ9P1W3 806 aa5.86□□□□□ -1.47
PRKD3-210ENST00000494667 NUP155O75694 1391 aa5.86□□□□□ -1.47
PRKD3-210ENST00000494667 PHF14O94880 888 aa5.86□□□□□ -1.47
PRKD3-210ENST00000494667 CDK11BP21127 795 aaKnown RBP5.86□□□□□ -1.47
PRKD3-210ENST00000494667 NCBP1Q09161 790 aaKnown RBP5.86□□□□□ -1.47
PRKD3-210ENST00000494667 CC2D1BQ5T0F9 858 aaKnown RBP5.86□□□□□ -1.47
PRKD3-210ENST00000494667 CAVIN1Q6NZI2 390 aaKnown RBP5.86□□□□□ -1.47
PRKD3-210ENST00000494667 KCND1Q9NSA2 647 aa5.86□□□□□ -1.47
PRKD3-210ENST00000494667 ANKRD26Q9UPS8 1709 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms