RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 PDCL3Q9H2J4 239 aa3.55□□□□□ -1.84
MDC1-208ENST00000494654 TSKSQ9UJT2 592 aa3.55□□□□□ -1.84
MDC1-208ENST00000494654 PBRM1Q86U86 1689 aa3.55□□□□□ -1.84
MDC1-208ENST00000494654 TARBP1Q13395 1621 aaKnown RBP3.55□□□□□ -1.84
MDC1-208ENST00000494654 CFAP74Q9C0B2 1584 aa3.55□□□□□ -1.84
MDC1-208ENST00000494654 HECW2Q9P2P5 1572 aa3.55□□□□□ -1.84
MDC1-208ENST00000494654 YEATS2Q9ULM3 1422 aa3.54□□□□□ -1.84
MDC1-208ENST00000494654 A0A0U1RQG5 324 aaPredicted RBP3.54□□□□□ -1.84
MDC1-208ENST00000494654 ARHGAP33O14559 1287 aa3.54□□□□□ -1.84
MDC1-208ENST00000494654 PADI6Q6TGC4 694 aa3.54□□□□□ -1.84
MDC1-208ENST00000494654 ILDR2Q71H61 639 aa3.54□□□□□ -1.84
MDC1-208ENST00000494654 ZBED2Q9BTP6 218 aa3.54□□□□□ -1.84
MDC1-208ENST00000494654 ISY1Q9ULR0 285 aaKnown RBP3.54□□□□□ -1.84
MDC1-208ENST00000494654 REREQ9P2R6 1566 aa3.54□□□□□ -1.84
MDC1-208ENST00000494654 MYH15Q9Y2K3 1946 aa3.54□□□□□ -1.84
MDC1-208ENST00000494654 UHRF1BP1LA0JNW5 1464 aa3.54□□□□□ -1.84
MDC1-208ENST00000494654 SPHKAPQ2M3C7 1700 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 EIF3AQ14152 1382 aaKnown RBP3.53□□□□□ -1.84
MDC1-208ENST00000494654 KDM5AP29375 1690 aaKnown RBP3.53□□□□□ -1.84
MDC1-208ENST00000494654 SHPRHQ149N8 1683 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 CLTCL1P53675 1640 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 FSD2A1L4K1 749 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 PTPREP23469 700 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 TERF1P54274 439 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 PTGDRQ13258 359 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 TAF7LQ5H9L4 462 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 LMOD2Q6P5Q4 547 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 SPNS2Q8IVW8 549 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 SIN3AQ96ST3 1273 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 EPAS1Q99814 870 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 MRS2Q9HD23 443 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 SEPT9Q9UHD8 586 aaPredicted RBP3.53□□□□□ -1.84
MDC1-208ENST00000494654 VPS9D1Q9Y2B5 631 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 SYNMO15061 1565 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 KDM5DQ9BY66 1539 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 POLA1P09884 1462 aaPredicted RBP3.53□□□□□ -1.84
MDC1-208ENST00000494654 GRIN2BQ13224 1484 aa3.53□□□□□ -1.84
MDC1-208ENST00000494654 BRD4O60885 1362 aaPredicted RBP3.52□□□□□ -1.85
MDC1-208ENST00000494654 DNMBPQ6XZF7 1577 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 HRO43593 1189 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 NCLP19338 710 aaKnown RBP3.52□□□□□ -1.85
MDC1-208ENST00000494654 ZNF326Q5BKZ1 582 aaKnown RBP3.52□□□□□ -1.85
MDC1-208ENST00000494654 UTP14CQ5TAP6 766 aaKnown RBP3.52□□□□□ -1.85
MDC1-208ENST00000494654 ADGRD1Q6QNK2 874 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 MTERF4Q7Z6M4 381 aaKnown RBP3.52□□□□□ -1.85
MDC1-208ENST00000494654 FBXW7Q969H0 707 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 PHOX2BQ99453 314 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 KIAA1468Q9P260 1216 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 PRDM15P57071 1507 aaPredicted RBP3.52□□□□□ -1.85
MDC1-208ENST00000494654 ANKRD26Q9UPS8 1709 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 ADGRL1O94910 1474 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 LMTK3Q96Q04 1460 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 TCHHQ07283 1943 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 KIAA1107Q9UPP5 1409 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 NCOA3Q9Y6Q9 1424 aa3.52□□□□□ -1.85
MDC1-208ENST00000494654 ARID4BQ4LE39 1312 aaPredicted RBP3.51□□□□□ -1.85
MDC1-208ENST00000494654 KDM2BQ8NHM5 1336 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 MAGI3Q5TCQ9 1506 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 KIAA1210Q9ULL0 1709 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 PSDA5PKW4 1024 aaPredicted RBP3.51□□□□□ -1.85
MDC1-208ENST00000494654 PPP1R3GB7ZBB8 358 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 BHMG1C9JSJ3 638 aaPredicted RBP3.51□□□□□ -1.85
MDC1-208ENST00000494654 FRAT2O75474 233 aaPredicted RBP3.51□□□□□ -1.85
MDC1-208ENST00000494654 HSPA5P11021 654 aaKnown RBP3.51□□□□□ -1.85
MDC1-208ENST00000494654 PRSS12P56730 875 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 EIF4G2P78344 907 aaKnown RBP eCLIP3.51□□□□□ -1.85
MDC1-208ENST00000494654 CCDC184Q52MB2 194 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 FAM9BQ8IZU0 186 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 ZC3H15Q8WU90 426 aaKnown RBP3.51□□□□□ -1.85
MDC1-208ENST00000494654 CDCA7LQ96GN5 454 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 CAMSAP2Q08AD1 1489 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 RTEL1-TNFRSF6BF6WH68 1400 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 PTPRKQ15262 1439 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 ARHGAP31Q2M1Z3 1444 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 N4BP2Q86UW6 1770 aaPredicted RBP3.51□□□□□ -1.85
MDC1-208ENST00000494654 KIF15Q9NS87 1388 aa3.51□□□□□ -1.85
MDC1-208ENST00000494654 IBTKQ9P2D0 1353 aaPredicted RBP3.51□□□□□ -1.85
MDC1-208ENST00000494654 SYNJ2O15056 1496 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 COL17A1Q9UMD9 1497 aaPredicted RBP3.5□□□□□ -1.85
MDC1-208ENST00000494654 GOLGA6L3A6NEY3 463 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 TRIM6-TRIM34B2RNG4 842 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 PBX2P40425 430 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 C8orf34Q49A92 452 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 RSPH4AQ5TD94 716 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.5□□□□□ -1.85
MDC1-208ENST00000494654 GPIHBP1Q8IV16 184 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 IPO4Q8TEX9 1081 aaKnown RBP3.5□□□□□ -1.85
MDC1-208ENST00000494654 POGKQ9P215 609 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 FHOD3Q2V2M9 1422 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 UHRF1BP1Q6BDS2 1440 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 ARHGEF5Q12774 1597 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 INO80Q9ULG1 1556 aaPredicted RBP3.5□□□□□ -1.85
MDC1-208ENST00000494654 IFT172Q9UG01 1749 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 CDC42BPBQ9Y5S2 1711 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 DISP3Q9P2K9 1392 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 NINLQ9Y2I6 1382 aa3.5□□□□□ -1.85
MDC1-208ENST00000494654 CHD2O14647 1828 aaKnown RBP3.49□□□□□ -1.85
MDC1-208ENST00000494654 KIF7Q2M1P5 1343 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 ABCC10Q5T3U5 1492 aa3.49□□□□□ -1.85
MDC1-208ENST00000494654 ABCA6Q8N139 1617 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms