RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 VSIG10Q8N0Z9 540 aa7.53□□□□□ -1.2
CTNNA3-204ENST00000494580 ZNF335Q9H4Z2 1342 aaPredicted RBP7.52□□□□□ -1.2
CTNNA3-204ENST00000494580 ADAMTS13Q76LX8 1427 aa7.52□□□□□ -1.2
CTNNA3-204ENST00000494580 NWD1Q149M9 1564 aa7.52□□□□□ -1.21
CTNNA3-204ENST00000494580 DHX57Q6P158 1386 aaKnown RBP7.52□□□□□ -1.21
CTNNA3-204ENST00000494580 ANKRD30BQ9BXX2 1392 aa7.52□□□□□ -1.21
CTNNA3-204ENST00000494580 PPP1R15BQ5SWA1 713 aa7.52□□□□□ -1.21
CTNNA3-204ENST00000494580 KDM2AQ9Y2K7 1162 aa7.52□□□□□ -1.21
CTNNA3-204ENST00000494580 XIRP1Q702N8 1843 aaKnown RBP7.52□□□□□ -1.21
CTNNA3-204ENST00000494580 ALKQ9UM73 1620 aa7.52□□□□□ -1.21
CTNNA3-204ENST00000494580 SETBP1Q9Y6X0 1596 aa7.51□□□□□ -1.21
CTNNA3-204ENST00000494580 MFSD10Q14728 455 aa7.51□□□□□ -1.21
CTNNA3-204ENST00000494580 SNPHO15079 494 aa7.5□□□□□ -1.21
CTNNA3-204ENST00000494580 CCDC144AA2RUR9 1427 aa7.5□□□□□ -1.21
CTNNA3-204ENST00000494580 PTPRUQ92729 1446 aa7.5□□□□□ -1.21
CTNNA3-204ENST00000494580 XRN1Q8IZH2 1706 aaKnown RBP7.49□□□□□ -1.21
CTNNA3-204ENST00000494580 TRIM26Q12899 539 aaPredicted RBP7.49□□□□□ -1.21
CTNNA3-204ENST00000494580 SLC52A1Q9NWF4 448 aa7.49□□□□□ -1.21
CTNNA3-204ENST00000494580 PLEKHG1Q9ULL1 1385 aa7.48□□□□□ -1.21
CTNNA3-204ENST00000494580 NRXN1Q9ULB1 1477 aa7.48□□□□□ -1.21
CTNNA3-204ENST00000494580 MMRN1Q13201 1228 aa7.47□□□□□ -1.21
CTNNA3-204ENST00000494580 DOK7Q18PE1 504 aa7.47□□□□□ -1.21
CTNNA3-204ENST00000494580 TXNDC2Q86VQ3 553 aa7.47□□□□□ -1.21
CTNNA3-204ENST00000494580 THEMISQ8N1K5 641 aaPredicted RBP7.47□□□□□ -1.21
CTNNA3-204ENST00000494580 SLC26A8Q96RN1 970 aa7.47□□□□□ -1.21
CTNNA3-204ENST00000494580 LRRC7Q96NW7 1537 aa7.47□□□□□ -1.21
CTNNA3-204ENST00000494580 DIP2AQ14689 1571 aa7.46□□□□□ -1.21
CTNNA3-204ENST00000494580 PIK3C2GO75747 1445 aa7.46□□□□□ -1.21
CTNNA3-204ENST00000494580 CHD2O14647 1828 aaKnown RBP7.46□□□□□ -1.21
CTNNA3-204ENST00000494580 HOXB3P14651 431 aaPredicted RBP7.46□□□□□ -1.22
CTNNA3-204ENST00000494580 E2F4Q16254 413 aa7.46□□□□□ -1.22
CTNNA3-204ENST00000494580 ZNF710Q8N1W2 664 aa7.46□□□□□ -1.22
CTNNA3-204ENST00000494580 PCGF6Q9BYE7 350 aa7.46□□□□□ -1.22
CTNNA3-204ENST00000494580 MYOM2P54296 1465 aa7.46□□□□□ -1.22
CTNNA3-204ENST00000494580 ADGRF5Q8IZF2 1346 aa7.46□□□□□ -1.22
CTNNA3-204ENST00000494580 METP08581 1390 aa7.46□□□□□ -1.22
CTNNA3-204ENST00000494580 ANKLE2Q86XL3 938 aa7.45□□□□□ -1.22
CTNNA3-204ENST00000494580 RBM33Q96EV2 1170 aaKnown RBP7.45□□□□□ -1.22
CTNNA3-204ENST00000494580 ADGRB1O14514 1584 aa7.45□□□□□ -1.22
CTNNA3-204ENST00000494580 NALCNQ8IZF0 1738 aa7.44□□□□□ -1.22
CTNNA3-204ENST00000494580 RIMBP2O15034 1052 aa7.44□□□□□ -1.22
CTNNA3-204ENST00000494580 SLC34A2O95436 690 aa7.44□□□□□ -1.22
CTNNA3-204ENST00000494580 HRCP23327 699 aa7.44□□□□□ -1.22
CTNNA3-204ENST00000494580 SIN3AQ96ST3 1273 aa7.44□□□□□ -1.22
CTNNA3-204ENST00000494580 CPS1P31327 1500 aa7.43□□□□□ -1.22
CTNNA3-204ENST00000494580 TBC1D12O60347 775 aa7.43□□□□□ -1.22
CTNNA3-204ENST00000494580 CAMK2BQ13554 666 aa7.43□□□□□ -1.22
CTNNA3-204ENST00000494580 RGL3Q3MIN7 710 aa7.43□□□□□ -1.22
CTNNA3-204ENST00000494580 ZNF326Q5BKZ1 582 aaKnown RBP7.43□□□□□ -1.22
CTNNA3-204ENST00000494580 SPNS2Q8IVW8 549 aa7.43□□□□□ -1.22
CTNNA3-204ENST00000494580 UPF1Q92900 1129 aaKnown RBP eCLIP7.43□□□□□ -1.22
CTNNA3-204ENST00000494580 KNDC1Q76NI1 1749 aa7.43□□□□□ -1.22
CTNNA3-204ENST00000494580 NKTRP30414 1462 aaKnown RBP7.43□□□□□ -1.22
CTNNA3-204ENST00000494580 PPP1R15AO75807 674 aaPredicted RBP7.42□□□□□ -1.22
CTNNA3-204ENST00000494580 MAP3K9P80192 1104 aa7.42□□□□□ -1.22
CTNNA3-204ENST00000494580 ARSIQ5FYB1 569 aa7.42□□□□□ -1.22
CTNNA3-204ENST00000494580 ROBO2Q9HCK4 1378 aa7.42□□□□□ -1.22
CTNNA3-204ENST00000494580 ST18O60284 1047 aa7.41□□□□□ -1.22
CTNNA3-204ENST00000494580 KCNA6P17658 529 aa7.41□□□□□ -1.22
CTNNA3-204ENST00000494580 PTCD2Q8WV60 388 aaKnown RBP7.41□□□□□ -1.22
CTNNA3-204ENST00000494580 EMILIN3Q9NT22 766 aa7.41□□□□□ -1.22
CTNNA3-204ENST00000494580 PCDHGA4Q9Y5G9 962 aa7.41□□□□□ -1.22
CTNNA3-204ENST00000494580 EID1Q9Y6B2 187 aa7.41□□□□□ -1.22
CTNNA3-204ENST00000494580 TMEM94Q12767 1356 aa7.41□□□□□ -1.22
CTNNA3-204ENST00000494580 PLEKHH1Q9ULM0 1364 aa7.41□□□□□ -1.22
CTNNA3-204ENST00000494580 PRAG1Q86YV5 1406 aa7.41□□□□□ -1.22
CTNNA3-204ENST00000494580 CERKQ8TCT0 537 aa7.4□□□□□ -1.22
CTNNA3-204ENST00000494580 OXER1Q8TDS5 423 aa7.4□□□□□ -1.22
CTNNA3-204ENST00000494580 KHSRPQ92945 711 aaKnown RBP eCLIP7.4□□□□□ -1.22
CTNNA3-204ENST00000494580 ZSWIM6Q9HCJ5 1215 aa7.4□□□□□ -1.22
CTNNA3-204ENST00000494580 LAMC1P11047 1609 aa7.4□□□□□ -1.22
CTNNA3-204ENST00000494580 ARHGEF28Q8N1W1 1705 aaKnown RBP7.4□□□□□ -1.23
CTNNA3-204ENST00000494580 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.4□□□□□ -1.23
CTNNA3-204ENST00000494580 TRPM1Q7Z4N2 1603 aa7.39□□□□□ -1.23
CTNNA3-204ENST00000494580 PTCH1Q13635 1447 aa7.39□□□□□ -1.23
CTNNA3-204ENST00000494580 GPR153Q6NV75 609 aa7.39□□□□□ -1.23
CTNNA3-204ENST00000494580 IQSEC2Q5JU85 1478 aa7.38□□□□□ -1.23
CTNNA3-204ENST00000494580 TECPR2O15040 1411 aa7.38□□□□□ -1.23
CTNNA3-204ENST00000494580 DPYSL4O14531 572 aa7.38□□□□□ -1.23
CTNNA3-204ENST00000494580 KCNV2Q8TDN2 545 aa7.38□□□□□ -1.23
CTNNA3-204ENST00000494580 YTHDC2Q9H6S0 1430 aaKnown RBP7.37□□□□□ -1.23
CTNNA3-204ENST00000494580 HOXB1P14653 301 aaPredicted RBP7.37□□□□□ -1.23
CTNNA3-204ENST00000494580 CFAP70Q5T0N1 1121 aa7.37□□□□□ -1.23
CTNNA3-204ENST00000494580 TMEM132EQ6IEE7 984 aa7.37□□□□□ -1.23
CTNNA3-204ENST00000494580 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.37□□□□□ -1.23
CTNNA3-204ENST00000494580 L3MBTL2Q969R5 705 aa7.37□□□□□ -1.23
CTNNA3-204ENST00000494580 BCANQ96GW7 911 aa7.37□□□□□ -1.23
CTNNA3-204ENST00000494580 TBX22Q9Y458 520 aa7.37□□□□□ -1.23
CTNNA3-204ENST00000494580 PIK3R4Q99570 1358 aa7.36□□□□□ -1.23
CTNNA3-204ENST00000494580 KIAA1210Q9ULL0 1709 aa7.36□□□□□ -1.23
CTNNA3-204ENST00000494580 RPGRIP1LQ68CZ1 1315 aa7.36□□□□□ -1.23
CTNNA3-204ENST00000494580 NUDT7P0C024 238 aa7.36□□□□□ -1.23
CTNNA3-204ENST00000494580 NEUROD1Q13562 356 aa7.36□□□□□ -1.23
CTNNA3-204ENST00000494580 ARHGEF1Q92888 912 aaKnown RBP7.36□□□□□ -1.23
CTNNA3-204ENST00000494580 ADGRL3Q9HAR2 1447 aa7.35□□□□□ -1.23
CTNNA3-204ENST00000494580 LRPPRCP42704 1394 aaKnown RBP7.35□□□□□ -1.23
CTNNA3-204ENST00000494580 ROBO1Q9Y6N7 1651 aa7.35□□□□□ -1.23
CTNNA3-204ENST00000494580 USP32Q8NFA0 1604 aa7.35□□□□□ -1.23
CTNNA3-204ENST00000494580 CDC42BPGQ6DT37 1551 aa7.35□□□□□ -1.23
CTNNA3-204ENST00000494580 EVI5O60447 810 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms