RNA–Protein interactions for RNA: ENST00000494346.1

RFTN2-204, Transcript of raftlin family member 2, humanhuman

TSL 2

Gene RFTN2, Length 951 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2-204ENST00000494346 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
RFTN2-204ENST00000494346 RGS12O14924 1447 aa14□□□□□ -0.17
RFTN2-204ENST00000494346 ATRNO75882 1429 aa14□□□□□ -0.17
RFTN2-204ENST00000494346 POLR3AO14802 1390 aaPredicted RBP14□□□□□ -0.17
RFTN2-204ENST00000494346 CABLES1Q8TDN4 633 aa14□□□□□ -0.17
RFTN2-204ENST00000494346 PIK3C2AO00443 1686 aa14□□□□□ -0.17
RFTN2-204ENST00000494346 SLIT2O94813 1529 aa14□□□□□ -0.17
RFTN2-204ENST00000494346 BCL9LQ86UU0 1499 aa13.99□□□□□ -0.17
RFTN2-204ENST00000494346 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
RFTN2-204ENST00000494346 PCGF6Q9BYE7 350 aa13.99□□□□□ -0.17
RFTN2-204ENST00000494346 CABP2Q9NPB3 220 aa13.99□□□□□ -0.17
RFTN2-204ENST00000494346 GLI3P10071 1580 aa13.99□□□□□ -0.17
RFTN2-204ENST00000494346 ACEP12821 1306 aa13.98□□□□□ -0.17
RFTN2-204ENST00000494346 RXRBP28702 533 aa13.98□□□□□ -0.17
RFTN2-204ENST00000494346 FNBP4Q8N3X1 1017 aaPredicted RBP13.98□□□□□ -0.17
RFTN2-204ENST00000494346 HAP1P54257 671 aaPredicted RBP13.97□□□□□ -0.17
RFTN2-204ENST00000494346 CARD11Q9BXL7 1154 aa13.97□□□□□ -0.17
RFTN2-204ENST00000494346 QTRT2Q9H974 415 aaKnown RBP13.97□□□□□ -0.17
RFTN2-204ENST00000494346 USP21Q9UK80 565 aa13.97□□□□□ -0.17
RFTN2-204ENST00000494346 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
RFTN2-204ENST00000494346 EP400Q96L91 3159 aa13.96□□□□□ -0.17
RFTN2-204ENST00000494346 PAK3O75914 559 aaPredicted RBP13.96□□□□□ -0.17
RFTN2-204ENST00000494346 EVC2Q86UK5 1308 aa13.95□□□□□ -0.18
RFTN2-204ENST00000494346 PLEKHG3A1L390 1219 aa13.95□□□□□ -0.18
RFTN2-204ENST00000494346 SBNO2Q9Y2G9 1366 aa13.95□□□□□ -0.18
RFTN2-204ENST00000494346 RGPD5Q99666 1765 aa13.94□□□□□ -0.18
RFTN2-204ENST00000494346 RBM6P78332 1123 aaKnown RBP13.94□□□□□ -0.18
RFTN2-204ENST00000494346 USP6P35125 1406 aa13.93□□□□□ -0.18
RFTN2-204ENST00000494346 TRPC5Q9UL62 973 aaPredicted RBP13.93□□□□□ -0.18
RFTN2-204ENST00000494346 USP54Q70EL1 1684 aa13.93□□□□□ -0.18
RFTN2-204ENST00000494346 LMO7Q8WWI1 1683 aa13.93□□□□□ -0.18
RFTN2-204ENST00000494346 NUTM2GQ5VZR2 741 aa13.92□□□□□ -0.18
RFTN2-204ENST00000494346 CABP1Q9NZU7 370 aa13.91□□□□□ -0.18
RFTN2-204ENST00000494346 LTN1O94822 1766 aa13.91□□□□□ -0.18
RFTN2-204ENST00000494346 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
RFTN2-204ENST00000494346 SLIT3O75094 1523 aa13.9□□□□□ -0.18
RFTN2-204ENST00000494346 UNC5CLQ8IV45 518 aa13.9□□□□□ -0.18
RFTN2-204ENST00000494346 ATAD2Q6PL18 1390 aa13.9□□□□□ -0.18
RFTN2-204ENST00000494346 MYOM1P52179 1685 aa13.9□□□□□ -0.18
RFTN2-204ENST00000494346 WNK3Q9BYP7 1800 aa13.9□□□□□ -0.18
RFTN2-204ENST00000494346 SSH2Q76I76 1423 aa13.9□□□□□ -0.19
RFTN2-204ENST00000494346 COL18A1P39060 1754 aa13.89□□□□□ -0.19
RFTN2-204ENST00000494346 CD163L1Q9NR16 1453 aa13.89□□□□□ -0.19
RFTN2-204ENST00000494346 FAM83GA6ND36 823 aa13.89□□□□□ -0.19
RFTN2-204ENST00000494346 BRD4O60885 1362 aaPredicted RBP13.88□□□□□ -0.19
RFTN2-204ENST00000494346 KIAA0232Q92628 1395 aa13.88□□□□□ -0.19
RFTN2-204ENST00000494346 CPSF1Q10570 1443 aaKnown RBP13.88□□□□□ -0.19
RFTN2-204ENST00000494346 THSD7AQ9UPZ6 1657 aa13.88□□□□□ -0.19
RFTN2-204ENST00000494346 USP19O94966 1318 aa13.88□□□□□ -0.19
RFTN2-204ENST00000494346 USP47Q96K76 1375 aa13.87□□□□□ -0.19
RFTN2-204ENST00000494346 ABTB2Q8N961 1025 aa13.87□□□□□ -0.19
RFTN2-204ENST00000494346 GJD4Q96KN9 370 aaPredicted RBP13.87□□□□□ -0.19
RFTN2-204ENST00000494346 KIF20BQ96Q89 1820 aa13.86□□□□□ -0.19
RFTN2-204ENST00000494346 BTG4Q9NY30 223 aa13.86□□□□□ -0.19
RFTN2-204ENST00000494346 ST20-MTHFSA0A0A6YYL1 179 aa13.85□□□□□ -0.19
RFTN2-204ENST00000494346 VPS72Q15906 364 aa13.85□□□□□ -0.19
RFTN2-204ENST00000494346 TESK2Q96S53 571 aa13.85□□□□□ -0.19
RFTN2-204ENST00000494346 PRDM11Q9NQV5 511 aa13.85□□□□□ -0.19
RFTN2-204ENST00000494346 CAMTA1Q9Y6Y1 1673 aa13.85□□□□□ -0.19
RFTN2-204ENST00000494346 NFAT5O94916 1531 aa13.85□□□□□ -0.19
RFTN2-204ENST00000494346 KTN1Q86UP2 1357 aaKnown RBP13.84□□□□□ -0.19
RFTN2-204ENST00000494346 ZC3H6P61129 1189 aaKnown RBP13.84□□□□□ -0.19
RFTN2-204ENST00000494346 CHRNA2Q15822 529 aa13.84□□□□□ -0.19
RFTN2-204ENST00000494346 CCER1Q8TC90 406 aaPredicted RBP13.84□□□□□ -0.19
RFTN2-204ENST00000494346 UPF1Q92900 1129 aaKnown RBP eCLIP13.84□□□□□ -0.19
RFTN2-204ENST00000494346 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
RFTN2-204ENST00000494346 CCDC9Q9Y3X0 531 aaKnown RBP13.83□□□□□ -0.2
RFTN2-204ENST00000494346 TTC21BQ7Z4L5 1316 aa13.83□□□□□ -0.2
RFTN2-204ENST00000494346 CPDO75976 1380 aa13.83□□□□□ -0.2
RFTN2-204ENST00000494346 TIMELESSQ9UNS1 1208 aa13.82□□□□□ -0.2
RFTN2-204ENST00000494346 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
RFTN2-204ENST00000494346 PARP4Q9UKK3 1724 aaKnown RBP13.81□□□□□ -0.2
RFTN2-204ENST00000494346 NLRP13Q86W25 1043 aa13.81□□□□□ -0.2
RFTN2-204ENST00000494346 TMC1Q8TDI8 760 aa13.81□□□□□ -0.2
RFTN2-204ENST00000494346 GCP02774 474 aa13.8□□□□□ -0.2
RFTN2-204ENST00000494346 NLRP6P59044 892 aa13.8□□□□□ -0.2
RFTN2-204ENST00000494346 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
RFTN2-204ENST00000494346 TTC21AQ8NDW8 1320 aa13.8□□□□□ -0.2
RFTN2-204ENST00000494346 EDC4Q6P2E9 1401 aaKnown RBP13.8□□□□□ -0.2
RFTN2-204ENST00000494346 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
RFTN2-204ENST00000494346 RGPD1P0DJD0 1748 aa13.79□□□□□ -0.2
RFTN2-204ENST00000494346 TNS1Q9HBL0 1735 aaKnown RBP13.79□□□□□ -0.2
RFTN2-204ENST00000494346 SLC12A5Q9H2X9 1139 aa13.79□□□□□ -0.2
RFTN2-204ENST00000494346 SPATA31A5Q5VU36 1347 aa13.79□□□□□ -0.2
RFTN2-204ENST00000494346 SPATA31A7Q8IWB4 1347 aa13.79□□□□□ -0.2
RFTN2-204ENST00000494346 SEPT12Q8IYM1 358 aa13.78□□□□□ -0.2
RFTN2-204ENST00000494346 STRN4Q9NRL3 753 aa13.78□□□□□ -0.2
RFTN2-204ENST00000494346 LRRC37A3O60309 1634 aa13.78□□□□□ -0.2
RFTN2-204ENST00000494346 ZBTB7CA1YPR0 619 aa13.77□□□□□ -0.21
RFTN2-204ENST00000494346 ABCC6O95255 1503 aa13.77□□□□□ -0.21
RFTN2-204ENST00000494346 RGPD2P0DJD1 1756 aa13.77□□□□□ -0.21
RFTN2-204ENST00000494346 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.21
RFTN2-204ENST00000494346 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.77□□□□□ -0.21
RFTN2-204ENST00000494346 PUS7Q96PZ0 661 aaKnown RBP13.77□□□□□ -0.21
RFTN2-204ENST00000494346 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
RFTN2-204ENST00000494346 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.21
RFTN2-204ENST00000494346 SBF2Q86WG5 1849 aa13.76□□□□□ -0.21
RFTN2-204ENST00000494346 OVOS2A0A0J9YW53 1432 aa13.76□□□□□ -0.21
RFTN2-204ENST00000494346 OVOS2Q6IE36 1432 aa13.76□□□□□ -0.21
RFTN2-204ENST00000494346 SOX12O15370 315 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms