RNA–Protein interactions for RNA: ENST00000494057.5

NICN1-206, Transcript of nicolin 1, humanhuman

TSL 2

Gene NICN1, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-206ENST00000494057 SPATA31A5Q5VU36 1347 aa22.18■■□□□ 1.14
NICN1-206ENST00000494057 SPATA31A7Q8IWB4 1347 aa22.18■■□□□ 1.14
NICN1-206ENST00000494057 TRAK1Q9UPV9 953 aa22.18■■□□□ 1.14
NICN1-206ENST00000494057 EN1Q05925 392 aaPredicted RBP22.17■■□□□ 1.14
NICN1-206ENST00000494057 DISP2A7MBM2 1401 aa22.16■■□□□ 1.14
NICN1-206ENST00000494057 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
NICN1-206ENST00000494057 PRR36Q9H6K5 1346 aa22.16■■□□□ 1.14
NICN1-206ENST00000494057 THSD7AQ9UPZ6 1657 aa22.16■■□□□ 1.14
NICN1-206ENST00000494057 WASLO00401 505 aaPredicted RBP22.14■■□□□ 1.13
NICN1-206ENST00000494057 FAM182BQ5T319 152 aa22.14■■□□□ 1.13
NICN1-206ENST00000494057 NGDNQ8NEJ9 315 aaKnown RBP22.14■■□□□ 1.13
NICN1-206ENST00000494057 PRDM11Q9NQV5 511 aa22.14■■□□□ 1.13
NICN1-206ENST00000494057 CRYBG1Q9Y4K1 1723 aa22.14■■□□□ 1.13
NICN1-206ENST00000494057 PAK3O75914 559 aaPredicted RBP22.13■■□□□ 1.13
NICN1-206ENST00000494057 TNS1Q9HBL0 1735 aaKnown RBP22.11■■□□□ 1.13
NICN1-206ENST00000494057 R3HDM1Q15032 1099 aaKnown RBP22.11■■□□□ 1.13
NICN1-206ENST00000494057 SPATA31A1Q5TZJ5 1347 aa22.09■■□□□ 1.13
NICN1-206ENST00000494057 KIAA0232Q92628 1395 aa22.09■■□□□ 1.13
NICN1-206ENST00000494057 ATP7BP35670 1465 aa22.08■■□□□ 1.12
NICN1-206ENST00000494057 ITSN1Q15811 1721 aa22.07■■□□□ 1.12
NICN1-206ENST00000494057 EZH2Q15910 746 aaKnown RBP22.07■■□□□ 1.12
NICN1-206ENST00000494057 FAM196AQ6ZSG2 479 aa22.07■■□□□ 1.12
NICN1-206ENST00000494057 DCAF11Q8TEB1 546 aa22.06■■□□□ 1.12
NICN1-206ENST00000494057 STAC3Q96MF2 364 aa22.06■■□□□ 1.12
NICN1-206ENST00000494057 KDM2AQ9Y2K7 1162 aa22.06■■□□□ 1.12
NICN1-206ENST00000494057 PARD3Q8TEW0 1356 aa22.06■■□□□ 1.12
NICN1-206ENST00000494057 RAB3GAP2Q9H2M9 1393 aa22.05■■□□□ 1.12
NICN1-206ENST00000494057 PHRF1Q9P1Y6 1649 aaKnown RBP22.05■■□□□ 1.12
NICN1-206ENST00000494057 TRIM37O94972 964 aa22.04■■□□□ 1.12
NICN1-206ENST00000494057 CHRNA2Q15822 529 aa22.04■■□□□ 1.12
NICN1-206ENST00000494057 CAMKK2Q96RR4 588 aa22.04■■□□□ 1.12
NICN1-206ENST00000494057 STRN4Q9NRL3 753 aa22.04■■□□□ 1.12
NICN1-206ENST00000494057 NUDT16Q96DE0 195 aaKnown RBP22.03■■□□□ 1.12
NICN1-206ENST00000494057 ARHGEF28Q8N1W1 1705 aaKnown RBP22.01■■□□□ 1.11
NICN1-206ENST00000494057 APBA3O96018 575 aa22.01■■□□□ 1.11
NICN1-206ENST00000494057 ZC3H6P61129 1189 aaKnown RBP22.01■■□□□ 1.11
NICN1-206ENST00000494057 SSH2Q76I76 1423 aa21.99■■□□□ 1.11
NICN1-206ENST00000494057 BARGINQ6ZT62 677 aa21.99■■□□□ 1.11
NICN1-206ENST00000494057 USP35Q9P2H5 1018 aa21.99■■□□□ 1.11
NICN1-206ENST00000494057 POLR3AO14802 1390 aaPredicted RBP21.99■■□□□ 1.11
NICN1-206ENST00000494057 EVA1CP58658 441 aa21.98■■□□□ 1.11
NICN1-206ENST00000494057 PDE3BQ13370 1112 aa21.98■■□□□ 1.11
NICN1-206ENST00000494057 NUTM2GQ5VZR2 741 aa21.97■■□□□ 1.11
NICN1-206ENST00000494057 NRKQ7Z2Y5 1582 aa21.96■■□□□ 1.11
NICN1-206ENST00000494057 TOPAZ1Q8N9V7 1692 aa21.96■■□□□ 1.11
NICN1-206ENST00000494057 CDK19Q9BWU1 502 aa21.96■■□□□ 1.11
NICN1-206ENST00000494057 ACEP12821 1306 aa21.96■■□□□ 1.11
NICN1-206ENST00000494057 RREB1Q92766 1687 aa21.95■■□□□ 1.1
NICN1-206ENST00000494057 CCDC61Q9Y6R9 512 aa21.95■■□□□ 1.1
NICN1-206ENST00000494057 NBPF8Q3BBV2 869 aa21.94■■□□□ 1.1
NICN1-206ENST00000494057 TCP11L2Q8N4U5 519 aa21.94■■□□□ 1.1
NICN1-206ENST00000494057 CPDO75976 1380 aa21.94■■□□□ 1.1
NICN1-206ENST00000494057 NBPF14Q5TI25 921 aa21.93■■□□□ 1.1
NICN1-206ENST00000494057 LARP1Q6PKG0 1096 aaKnown RBP21.93■■□□□ 1.1
NICN1-206ENST00000494057 CAMTA1Q9Y6Y1 1673 aa21.93■■□□□ 1.1
NICN1-206ENST00000494057 NUP188Q5SRE5 1749 aa21.92■■□□□ 1.1
NICN1-206ENST00000494057 PLEKHG3A1L390 1219 aa21.92■■□□□ 1.1
NICN1-206ENST00000494057 ABTB2Q8N961 1025 aa21.92■■□□□ 1.1
NICN1-206ENST00000494057 THRAP3Q9Y2W1 955 aaKnown RBP21.92■■□□□ 1.1
NICN1-206ENST00000494057 LMO7Q8WWI1 1683 aa21.91■■□□□ 1.1
NICN1-206ENST00000494057 USP19O94966 1318 aa21.91■■□□□ 1.1
NICN1-206ENST00000494057 C11orf95C9JLR9 678 aaPredicted RBP21.88■■□□□ 1.09
NICN1-206ENST00000494057 NLRP13Q86W25 1043 aa21.87■■□□□ 1.09
NICN1-206ENST00000494057 PARP4Q9UKK3 1724 aaKnown RBP21.86■■□□□ 1.09
NICN1-206ENST00000494057 COL5A2P05997 1499 aaPredicted RBP21.86■■□□□ 1.09
NICN1-206ENST00000494057 GCP02774 474 aa21.86■■□□□ 1.09
NICN1-206ENST00000494057 KIAA1210Q9ULL0 1709 aa21.85■■□□□ 1.09
NICN1-206ENST00000494057 PPIP5K1Q6PFW1 1433 aa21.84■■□□□ 1.09
NICN1-206ENST00000494057 YY1P25490 414 aa21.84■■□□□ 1.09
NICN1-206ENST00000494057 SPON1Q9HCB6 807 aa21.84■■□□□ 1.09
NICN1-206ENST00000494057 PPP1R1BQ9UD71 204 aaPredicted RBP21.84■■□□□ 1.09
NICN1-206ENST00000494057 BRD4O60885 1362 aaPredicted RBP21.84■■□□□ 1.09
NICN1-206ENST00000494057 OVOS2A0A0G2JMS6 1433 aa21.83■■□□□ 1.09
NICN1-206ENST00000494057 OVOS2A0A0J9YW53 1432 aa21.83■■□□□ 1.09
NICN1-206ENST00000494057 CRB1P82279 1406 aa21.83■■□□□ 1.09
NICN1-206ENST00000494057 OVOS2Q6IE36 1432 aa21.83■■□□□ 1.09
NICN1-206ENST00000494057 UTRNP46939 3433 aa21.83■■□□□ 1.09
NICN1-206ENST00000494057 SRPK2P78362 688 aaKnown RBP21.82■■□□□ 1.08
NICN1-206ENST00000494057 KCNQ2O43526 872 aa21.81■■□□□ 1.08
NICN1-206ENST00000494057 NINLQ9Y2I6 1382 aa21.81■■□□□ 1.08
NICN1-206ENST00000494057 RGPD3A6NKT7 1758 aaPredicted RBP21.79■■□□□ 1.08
NICN1-206ENST00000494057 RGPD4Q7Z3J3 1758 aa21.79■■□□□ 1.08
NICN1-206ENST00000494057 DCAF8L1A6NGE4 600 aa21.79■■□□□ 1.08
NICN1-206ENST00000494057 PEAK1Q9H792 1746 aa21.78■■□□□ 1.08
NICN1-206ENST00000494057 AATKQ6ZMQ8 1374 aa21.78■■□□□ 1.08
NICN1-206ENST00000494057 CENPJQ9HC77 1338 aaPredicted RBP21.78■■□□□ 1.08
NICN1-206ENST00000494057 LRRC37A3O60309 1634 aa21.77■■□□□ 1.08
NICN1-206ENST00000494057 PLSCR1O15162 318 aa21.77■■□□□ 1.08
NICN1-206ENST00000494057 NBPF1Q3BBV0 1214 aa21.77■■□□□ 1.08
NICN1-206ENST00000494057 CABP2Q9NPB3 220 aa21.77■■□□□ 1.08
NICN1-206ENST00000494057 SLIT3O75094 1523 aa21.76■■□□□ 1.07
NICN1-206ENST00000494057 ZBTB7CA1YPR0 619 aa21.76■■□□□ 1.07
NICN1-206ENST00000494057 USP6P35125 1406 aa21.76■■□□□ 1.07
NICN1-206ENST00000494057 DDB1Q16531 1140 aa21.76■■□□□ 1.07
NICN1-206ENST00000494057 NLRP6P59044 892 aa21.75■■□□□ 1.07
NICN1-206ENST00000494057 TOM1L2Q6ZVM7 507 aa21.74■■□□□ 1.07
NICN1-206ENST00000494057 BCL11BQ9C0K0 894 aaPredicted RBP21.73■■□□□ 1.07
NICN1-206ENST00000494057 CABP1Q9NZU7 370 aa21.72■■□□□ 1.07
NICN1-206ENST00000494057 QRICH2Q9H0J4 1663 aa21.72■■□□□ 1.07
NICN1-206ENST00000494057 ANO8Q9HCE9 1232 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms