RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 ARID4AP29374 1257 aaPredicted RBP8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L24Q0WX57 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 KIAA1468Q9P260 1216 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
SND1-216ENST00000492840 SKIP12755 728 aa8.19□□□□□ -1.1
SND1-216ENST00000492840 NOM1Q5C9Z4 860 aaKnown RBP8.19□□□□□ -1.1
SND1-216ENST00000492840 MRRFQ96E11 262 aaKnown RBP8.19□□□□□ -1.1
SND1-216ENST00000492840 SOWAHDA6NJG2 315 aa8.18□□□□□ -1.1
SND1-216ENST00000492840 CFHP08603 1231 aa8.18□□□□□ -1.1
SND1-216ENST00000492840 CRTC2Q53ET0 693 aaPredicted RBP8.18□□□□□ -1.1
SND1-216ENST00000492840 DESI1Q6ICB0 168 aa8.18□□□□□ -1.1
SND1-216ENST00000492840 RETREG3Q86VR2 466 aa8.18□□□□□ -1.1
SND1-216ENST00000492840 FAM174AQ8TBP5 190 aa8.18□□□□□ -1.1
SND1-216ENST00000492840 KCNK17Q96T54 332 aa8.18□□□□□ -1.1
SND1-216ENST00000492840 POTEIP0CG38 1075 aa8.17□□□□□ -1.1
SND1-216ENST00000492840 ATP6V1AP38606 617 aa8.17□□□□□ -1.1
SND1-216ENST00000492840 FAM69CQ0P6D2 419 aa8.17□□□□□ -1.1
SND1-216ENST00000492840 CLP1Q92989 425 aaKnown RBP8.17□□□□□ -1.1
SND1-216ENST00000492840 ZNF16P17020 682 aaPredicted RBP8.16□□□□□ -1.1
SND1-216ENST00000492840 ZCCHC6Q5VYS8 1495 aaKnown RBP8.16□□□□□ -1.1
SND1-216ENST00000492840 LYPD8Q6UX82 237 aa8.16□□□□□ -1.1
SND1-216ENST00000492840 DEPDC4Q8N2C3 294 aa8.16□□□□□ -1.1
SND1-216ENST00000492840 ZBED2Q9BTP6 218 aa8.16□□□□□ -1.1
SND1-216ENST00000492840 BAZ1AQ9NRL2 1556 aaPredicted RBP8.15□□□□□ -1.1
SND1-216ENST00000492840 SERPINB4P48594 390 aa8.15□□□□□ -1.1
SND1-216ENST00000492840 SLC4A3P48751 1232 aa8.15□□□□□ -1.1
SND1-216ENST00000492840 PTK7Q13308 1070 aa8.15□□□□□ -1.1
SND1-216ENST00000492840 SIRT1Q96EB6 747 aa8.15□□□□□ -1.1
SND1-216ENST00000492840 MKRN1Q9UHC7 482 aaKnown RBP8.15□□□□□ -1.1
SND1-216ENST00000492840 SEPT9Q9UHD8 586 aaPredicted RBP8.15□□□□□ -1.1
SND1-216ENST00000492840 FKBPLQ9UIM3 349 aa8.15□□□□□ -1.1
SND1-216ENST00000492840 NESP48681 1621 aa8.14□□□□□ -1.11
SND1-216ENST00000492840 SMARCA2P51531 1590 aa8.14□□□□□ -1.11
SND1-216ENST00000492840 LARP1Q6PKG0 1096 aaKnown RBP8.14□□□□□ -1.11
SND1-216ENST00000492840 FAM200AQ8TCP9 573 aa8.14□□□□□ -1.11
SND1-216ENST00000492840 BCL2L13Q9BXK5 485 aa8.14□□□□□ -1.11
SND1-216ENST00000492840 ATP2B4P23634 1241 aa8.13□□□□□ -1.11
SND1-216ENST00000492840 HDGFP51858 240 aaKnown RBP8.13□□□□□ -1.11
SND1-216ENST00000492840 MARSP56192 900 aaKnown RBP8.13□□□□□ -1.11
SND1-216ENST00000492840 NCAPD3P42695 1498 aa8.13□□□□□ -1.11
SND1-216ENST00000492840 ZC3H4Q9UPT8 1303 aaKnown RBP8.12□□□□□ -1.11
SND1-216ENST00000492840 ATP5J2-PTCD1G3V325 749 aa8.12□□□□□ -1.11
SND1-216ENST00000492840 RASA1P20936 1047 aa8.12□□□□□ -1.11
SND1-216ENST00000492840 NCOA4Q13772 614 aa8.12□□□□□ -1.11
SND1-216ENST00000492840 GIPC2Q8TF65 315 aa8.12□□□□□ -1.11
SND1-216ENST00000492840 KCNH8Q96L42 1107 aa8.12□□□□□ -1.11
SND1-216ENST00000492840 CDCA7Q9BWT1 371 aaPredicted RBP8.12□□□□□ -1.11
SND1-216ENST00000492840 RABGEF1Q9UJ41 708 aa8.12□□□□□ -1.11
SND1-216ENST00000492840 F12P00748 615 aaPredicted RBP8.11□□□□□ -1.11
SND1-216ENST00000492840 Q3C1V9 767 aa8.11□□□□□ -1.11
SND1-216ENST00000492840 MORN1Q5T089 497 aa8.11□□□□□ -1.11
SND1-216ENST00000492840 ANKMY2Q8IV38 441 aa8.11□□□□□ -1.11
SND1-216ENST00000492840 FAM98CQ17RN3 349 aaKnown RBP8.1□□□□□ -1.11
SND1-216ENST00000492840 SAMD7Q7Z3H4 446 aa8.1□□□□□ -1.11
SND1-216ENST00000492840 NPAS4Q8IUM7 802 aa8.1□□□□□ -1.11
SND1-216ENST00000492840 SLC27A5Q9Y2P5 690 aa8.1□□□□□ -1.11
SND1-216ENST00000492840 TCF3P15923 654 aa8.09□□□□□ -1.11
SND1-216ENST00000492840 SCNN1AP37088 669 aa8.09□□□□□ -1.11
SND1-216ENST00000492840 SWI5Q1ZZU3 235 aa8.09□□□□□ -1.11
SND1-216ENST00000492840 SLFNL1Q499Z3 407 aa8.09□□□□□ -1.11
SND1-216ENST00000492840 KMT5BQ4FZB7 885 aa8.09□□□□□ -1.11
SND1-216ENST00000492840 PLPP7Q8NBV4 271 aa8.09□□□□□ -1.11
SND1-216ENST00000492840 CEP126Q9P2H0 1117 aa8.09□□□□□ -1.11
SND1-216ENST00000492840 BIN2Q9UBW5 565 aaPredicted RBP8.09□□□□□ -1.11
SND1-216ENST00000492840 KIF21AQ7Z4S6 1674 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 RIMBP3CA6NJZ7 1639 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 RIMBP3BA6NNM3 1639 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 RIMBP3Q9UFD9 1639 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 ANKRD33BA6NCL7 494 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 HMGB1P09429 215 aaKnown RBP8.08□□□□□ -1.12
SND1-216ENST00000492840 DPYDQ12882 1025 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 PUS10Q3MIT2 529 aaKnown RBP8.08□□□□□ -1.12
SND1-216ENST00000492840 RNF135Q8IUD6 432 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 PHTF2Q8N3S3 785 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 C1orf216Q8TAB5 229 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 PUS7Q96PZ0 661 aaKnown RBP8.08□□□□□ -1.12
SND1-216ENST00000492840 MAP10Q9P2G4 905 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 LAMC3Q9Y6N6 1575 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 HMGXB3Q12766 1538 aa8.08□□□□□ -1.12
SND1-216ENST00000492840 LZTS3O60299 673 aaPredicted RBP8.07□□□□□ -1.12
SND1-216ENST00000492840 RNF40O75150 1001 aa8.07□□□□□ -1.12
SND1-216ENST00000492840 HSP90B1P14625 803 aaKnown RBP8.07□□□□□ -1.12
SND1-216ENST00000492840 PSEN2P49810 448 aa8.07□□□□□ -1.12
SND1-216ENST00000492840 KCNH2Q12809 1159 aa8.07□□□□□ -1.12
SND1-216ENST00000492840 RNF19BQ6ZMZ0 732 aa8.07□□□□□ -1.12
SND1-216ENST00000492840 ACTN4O43707 911 aaKnown RBP8.06□□□□□ -1.12
SND1-216ENST00000492840 HOXB1P14653 301 aaPredicted RBP8.06□□□□□ -1.12
SND1-216ENST00000492840 OGFOD1Q8N543 542 aa8.06□□□□□ -1.12
SND1-216ENST00000492840 ZNF592Q92610 1267 aa8.06□□□□□ -1.12
SND1-216ENST00000492840 ZNF594Q96JF6 807 aaPredicted RBP8.06□□□□□ -1.12
SND1-216ENST00000492840 SLC4A5Q9BY07 1137 aa8.06□□□□□ -1.12
SND1-216ENST00000492840 CHIC2Q9UKJ5 165 aa8.06□□□□□ -1.12
SND1-216ENST00000492840 POTEJP0CG39 1038 aa8.05□□□□□ -1.12
SND1-216ENST00000492840 CLDN10P78369 228 aa8.05□□□□□ -1.12
SND1-216ENST00000492840 EML3Q32P44 896 aa8.05□□□□□ -1.12
SND1-216ENST00000492840 BLOC1S3Q6QNY0 202 aa8.05□□□□□ -1.12
SND1-216ENST00000492840 USB1Q9BQ65 265 aaKnown RBP8.05□□□□□ -1.12
SND1-216ENST00000492840 EGFL7Q9UHF1 273 aa8.05□□□□□ -1.12
SND1-216ENST00000492840 GPSM3Q9Y4H4 160 aa8.05□□□□□ -1.12
SND1-216ENST00000492840 VAMP1P23763 118 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms