RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 TNS1Q9HBL0 1735 aaKnown RBP16.27■□□□□ 0.19
SND1-215ENST00000492772 PHRF1Q9P1Y6 1649 aaKnown RBP16.25■□□□□ 0.19
SND1-215ENST00000492772 DISP2A7MBM2 1401 aa16.25■□□□□ 0.19
SND1-215ENST00000492772 ARHGEF28Q8N1W1 1705 aaKnown RBP16.25■□□□□ 0.19
SND1-215ENST00000492772 SPATA31A5Q5VU36 1347 aa16.24■□□□□ 0.19
SND1-215ENST00000492772 SPATA31A7Q8IWB4 1347 aa16.24■□□□□ 0.19
SND1-215ENST00000492772 MINK1Q8N4C8 1332 aaPredicted RBP16.24■□□□□ 0.19
SND1-215ENST00000492772 PRR36Q9H6K5 1346 aa16.24■□□□□ 0.19
SND1-215ENST00000492772 HIRIP3Q9BW71 556 aaPredicted RBP16.24■□□□□ 0.19
SND1-215ENST00000492772 TRAK1Q9UPV9 953 aa16.24■□□□□ 0.19
SND1-215ENST00000492772 ATP7BP35670 1465 aa16.22■□□□□ 0.19
SND1-215ENST00000492772 PSDA5PKW4 1024 aaPredicted RBP16.22■□□□□ 0.19
SND1-215ENST00000492772 WASLO00401 505 aaPredicted RBP16.22■□□□□ 0.19
SND1-215ENST00000492772 HRCP23327 699 aa16.22■□□□□ 0.19
SND1-215ENST00000492772 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
SND1-215ENST00000492772 PRDM11Q9NQV5 511 aa16.21■□□□□ 0.19
SND1-215ENST00000492772 RAB3GAP2Q9H2M9 1393 aa16.21■□□□□ 0.19
SND1-215ENST00000492772 TOPAZ1Q8N9V7 1692 aa16.21■□□□□ 0.18
SND1-215ENST00000492772 STAC3Q96MF2 364 aa16.2■□□□□ 0.18
SND1-215ENST00000492772 PAK3O75914 559 aaPredicted RBP16.19■□□□□ 0.18
SND1-215ENST00000492772 EN1Q05925 392 aaPredicted RBP16.19■□□□□ 0.18
SND1-215ENST00000492772 SPATA31A1Q5TZJ5 1347 aa16.18■□□□□ 0.18
SND1-215ENST00000492772 KIAA0232Q92628 1395 aa16.17■□□□□ 0.18
SND1-215ENST00000492772 DCAF11Q8TEB1 546 aa16.17■□□□□ 0.18
SND1-215ENST00000492772 NRKQ7Z2Y5 1582 aa16.17■□□□□ 0.18
SND1-215ENST00000492772 PARD3Q8TEW0 1356 aa16.16■□□□□ 0.18
SND1-215ENST00000492772 RREB1Q92766 1687 aa16.16■□□□□ 0.18
SND1-215ENST00000492772 FAM182BQ5T319 152 aa16.16■□□□□ 0.18
SND1-215ENST00000492772 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
SND1-215ENST00000492772 KIAA1210Q9ULL0 1709 aa16.14■□□□□ 0.17
SND1-215ENST00000492772 R3HDM1Q15032 1099 aaKnown RBP16.14■□□□□ 0.17
SND1-215ENST00000492772 FAM196AQ6ZSG2 479 aa16.14■□□□□ 0.17
SND1-215ENST00000492772 NUDT16Q96DE0 195 aaKnown RBP16.14■□□□□ 0.17
SND1-215ENST00000492772 POLR3AO14802 1390 aaPredicted RBP16.13■□□□□ 0.17
SND1-215ENST00000492772 SSH2Q76I76 1423 aa16.13■□□□□ 0.17
SND1-215ENST00000492772 LMO7Q8WWI1 1683 aa16.13■□□□□ 0.17
SND1-215ENST00000492772 NUP188Q5SRE5 1749 aa16.12■□□□□ 0.17
SND1-215ENST00000492772 EZH2Q15910 746 aaKnown RBP16.12■□□□□ 0.17
SND1-215ENST00000492772 STRN4Q9NRL3 753 aa16.12■□□□□ 0.17
SND1-215ENST00000492772 CHRNA2Q15822 529 aa16.11■□□□□ 0.17
SND1-215ENST00000492772 CAMKK2Q96RR4 588 aa16.11■□□□□ 0.17
SND1-215ENST00000492772 TRIM37O94972 964 aa16.1■□□□□ 0.17
SND1-215ENST00000492772 BARGINQ6ZT62 677 aa16.1■□□□□ 0.17
SND1-215ENST00000492772 PARP4Q9UKK3 1724 aaKnown RBP16.1■□□□□ 0.17
SND1-215ENST00000492772 CPDO75976 1380 aa16.1■□□□□ 0.17
SND1-215ENST00000492772 ZC3H6P61129 1189 aaKnown RBP16.09■□□□□ 0.17
SND1-215ENST00000492772 CDK19Q9BWU1 502 aa16.09■□□□□ 0.17
SND1-215ENST00000492772 CAMTA1Q9Y6Y1 1673 aa16.08■□□□□ 0.17
SND1-215ENST00000492772 APBA3O96018 575 aa16.08■□□□□ 0.16
SND1-215ENST00000492772 CCDC61Q9Y6R9 512 aa16.08■□□□□ 0.16
SND1-215ENST00000492772 ACEP12821 1306 aa16.08■□□□□ 0.16
SND1-215ENST00000492772 EVA1CP58658 441 aa16.07■□□□□ 0.16
SND1-215ENST00000492772 PDE3BQ13370 1112 aa16.07■□□□□ 0.16
SND1-215ENST00000492772 NUTM2GQ5VZR2 741 aa16.07■□□□□ 0.16
SND1-215ENST00000492772 USP35Q9P2H5 1018 aa16.07■□□□□ 0.16
SND1-215ENST00000492772 USP19O94966 1318 aa16.07■□□□□ 0.16
SND1-215ENST00000492772 RGPD3A6NKT7 1758 aaPredicted RBP16.07■□□□□ 0.16
SND1-215ENST00000492772 RGPD4Q7Z3J3 1758 aa16.07■□□□□ 0.16
SND1-215ENST00000492772 PLEKHG3A1L390 1219 aa16.06■□□□□ 0.16
SND1-215ENST00000492772 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
SND1-215ENST00000492772 TCP11L2Q8N4U5 519 aa16.05■□□□□ 0.16
SND1-215ENST00000492772 ABTB2Q8N961 1025 aa16.05■□□□□ 0.16
SND1-215ENST00000492772 THRAP3Q9Y2W1 955 aaKnown RBP16.05■□□□□ 0.16
SND1-215ENST00000492772 COL5A2P05997 1499 aaPredicted RBP16.04■□□□□ 0.16
SND1-215ENST00000492772 BRD4O60885 1362 aaPredicted RBP16.04■□□□□ 0.16
SND1-215ENST00000492772 PPIP5K1Q6PFW1 1433 aa16.03■□□□□ 0.16
SND1-215ENST00000492772 C11orf95C9JLR9 678 aaPredicted RBP16.03■□□□□ 0.16
SND1-215ENST00000492772 NBPF14Q5TI25 921 aa16.03■□□□□ 0.16
SND1-215ENST00000492772 LARP1Q6PKG0 1096 aaKnown RBP16.03■□□□□ 0.16
SND1-215ENST00000492772 PEAK1Q9H792 1746 aa16.02■□□□□ 0.16
SND1-215ENST00000492772 QRICH2Q9H0J4 1663 aa16.02■□□□□ 0.16
SND1-215ENST00000492772 LRRC37A3O60309 1634 aa16.02■□□□□ 0.16
SND1-215ENST00000492772 NLRP13Q86W25 1043 aa16.02■□□□□ 0.16
SND1-215ENST00000492772 WNK3Q9BYP7 1800 aa16.02■□□□□ 0.16
SND1-215ENST00000492772 OVOS2A0A0G2JMS6 1433 aa16.02■□□□□ 0.15
SND1-215ENST00000492772 OVOS2A0A0J9YW53 1432 aa16.02■□□□□ 0.15
SND1-215ENST00000492772 CRB1P82279 1406 aa16.02■□□□□ 0.15
SND1-215ENST00000492772 OVOS2Q6IE36 1432 aa16.02■□□□□ 0.15
SND1-215ENST00000492772 SLIT3O75094 1523 aa16.01■□□□□ 0.15
SND1-215ENST00000492772 SBF2Q86WG5 1849 aa15.99■□□□□ 0.15
SND1-215ENST00000492772 GCP02774 474 aa15.99■□□□□ 0.15
SND1-215ENST00000492772 SRPK2P78362 688 aaKnown RBP15.99■□□□□ 0.15
SND1-215ENST00000492772 CENPJQ9HC77 1338 aaPredicted RBP15.98■□□□□ 0.15
SND1-215ENST00000492772 USP6P35125 1406 aa15.98■□□□□ 0.15
SND1-215ENST00000492772 AATKQ6ZMQ8 1374 aa15.98■□□□□ 0.15
SND1-215ENST00000492772 PIK3C2AO00443 1686 aa15.97■□□□□ 0.15
SND1-215ENST00000492772 AKAP12Q02952 1782 aa15.97■□□□□ 0.15
SND1-215ENST00000492772 NINLQ9Y2I6 1382 aa15.97■□□□□ 0.15
SND1-215ENST00000492772 SPON1Q9HCB6 807 aa15.96■□□□□ 0.15
SND1-215ENST00000492772 COL18A1P39060 1754 aa15.95■□□□□ 0.14
SND1-215ENST00000492772 CASZ1Q86V15 1759 aa15.95■□□□□ 0.14
SND1-215ENST00000492772 PPP1R1BQ9UD71 204 aaPredicted RBP15.95■□□□□ 0.14
SND1-215ENST00000492772 KCNQ2O43526 872 aa15.94■□□□□ 0.14
SND1-215ENST00000492772 NBPF1Q3BBV0 1214 aa15.94■□□□□ 0.14
SND1-215ENST00000492772 CABP2Q9NPB3 220 aa15.94■□□□□ 0.14
SND1-215ENST00000492772 TRPM1Q7Z4N2 1603 aa15.94■□□□□ 0.14
SND1-215ENST00000492772 ZBTB7CA1YPR0 619 aa15.93■□□□□ 0.14
SND1-215ENST00000492772 YY1P25490 414 aa15.93■□□□□ 0.14
SND1-215ENST00000492772 NLRP6P59044 892 aa15.93■□□□□ 0.14
SND1-215ENST00000492772 DDB1Q16531 1140 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms