RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	COL14A1	Q05707	1796 aa	Known RBP	28.62	■■■□□ 2.17
CDK5RAP2-218	ENST00000491334	TRIM37	O94972	964 aa		28.62	■■■□□ 2.17
CDK5RAP2-218	ENST00000491334	ACIN1	Q9UKV3	1341 aa	Known RBP	28.61	■■■□□ 2.17
CDK5RAP2-218	ENST00000491334	PAK3	O75914	559 aa	Predicted RBP	28.6	■■■□□ 2.17
CDK5RAP2-218	ENST00000491334	APBA3	O96018	575 aa		28.6	■■■□□ 2.17
CDK5RAP2-218	ENST00000491334	NGDN	Q8NEJ9	315 aa	Known RBP	28.59	■■■□□ 2.17
CDK5RAP2-218	ENST00000491334	EIF3A	Q14152	1382 aa	Known RBP	28.59	■■■□□ 2.17
CDK5RAP2-218	ENST00000491334	YY1	P25490	414 aa		28.58	■■■□□ 2.17
CDK5RAP2-218	ENST00000491334	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.58	■■■□□ 2.17
CDK5RAP2-218	ENST00000491334	SPATA31A1	Q5TZJ5	1347 aa		28.58	■■■□□ 2.17
CDK5RAP2-218	ENST00000491334	PARD3	Q8TEW0	1356 aa		28.57	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	DLC1	Q96QB1	1528 aa		28.55	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	NBPF8	Q3BBV2	869 aa		28.55	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	NBPF14	Q5TI25	921 aa		28.55	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	TRAK1	Q9UPV9	953 aa		28.54	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.54	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.53	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	WASL	O00401	505 aa	Predicted RBP	28.53	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	STRN4	Q9NRL3	753 aa		28.53	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	THSD7A	Q9UPZ6	1657 aa		28.53	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	ALS2	Q96Q42	1657 aa		28.52	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	PRR36	Q9H6K5	1346 aa		28.52	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	PDE3B	Q13370	1112 aa		28.52	■■■□□ 2.16
CDK5RAP2-218	ENST00000491334	ADGRB2	O60241	1585 aa		28.5	■■■□□ 2.15
CDK5RAP2-218	ENST00000491334	TNS1	Q9HBL0	1735 aa	Known RBP	28.5	■■■□□ 2.15
CDK5RAP2-218	ENST00000491334	DCAF8L1	A6NGE4	600 aa		28.5	■■■□□ 2.15
CDK5RAP2-218	ENST00000491334	EVA1C	P58658	441 aa		28.5	■■■□□ 2.15
CDK5RAP2-218	ENST00000491334	CHRNA2	Q15822	529 aa		28.5	■■■□□ 2.15
CDK5RAP2-218	ENST00000491334	KIAA0232	Q92628	1395 aa		28.49	■■■□□ 2.15
CDK5RAP2-218	ENST00000491334	USP35	Q9P2H5	1018 aa		28.48	■■■□□ 2.15
CDK5RAP2-218	ENST00000491334	BARGIN	Q6ZT62	677 aa		28.47	■■■□□ 2.15
CDK5RAP2-218	ENST00000491334	ZC3H6	P61129	1189 aa	Known RBP	28.46	■■■□□ 2.15
CDK5RAP2-218	ENST00000491334	PPP1R1B	Q9UD71	204 aa	Predicted RBP	28.46	■■■□□ 2.15
CDK5RAP2-218	ENST00000491334	SPON1	Q9HCB6	807 aa		28.45	■■■□□ 2.14
CDK5RAP2-218	ENST00000491334	TULP4	Q9NRJ4	1543 aa		28.44	■■■□□ 2.14
CDK5RAP2-218	ENST00000491334	KCNQ2	O43526	872 aa		28.4	■■■□□ 2.14
CDK5RAP2-218	ENST00000491334	NUDT16	Q96DE0	195 aa	Known RBP	28.4	■■■□□ 2.14
CDK5RAP2-218	ENST00000491334	NUTM2G	Q5VZR2	741 aa		28.39	■■■□□ 2.14
CDK5RAP2-218	ENST00000491334	TCP11L2	Q8N4U5	519 aa		28.39	■■■□□ 2.14
CDK5RAP2-218	ENST00000491334	ADGRB1	O14514	1584 aa		28.38	■■■□□ 2.13
CDK5RAP2-218	ENST00000491334	C11orf95	C9JLR9	678 aa	Predicted RBP	28.38	■■■□□ 2.13
CDK5RAP2-218	ENST00000491334	KDM2A	Q9Y2K7	1162 aa		28.38	■■■□□ 2.13
CDK5RAP2-218	ENST00000491334	CRYBG1	Q9Y4K1	1723 aa		28.38	■■■□□ 2.13
CDK5RAP2-218	ENST00000491334	THRAP3	Q9Y2W1	955 aa	Known RBP	28.36	■■■□□ 2.13
CDK5RAP2-218	ENST00000491334	LARP1	Q6PKG0	1096 aa	Known RBP	28.35	■■■□□ 2.13
CDK5RAP2-218	ENST00000491334	SSH2	Q76I76	1423 aa		28.35	■■■□□ 2.13
CDK5RAP2-218	ENST00000491334	STAC3	Q96MF2	364 aa		28.34	■■■□□ 2.13
CDK5RAP2-218	ENST00000491334	DCAF11	Q8TEB1	546 aa		28.33	■■■□□ 2.13
CDK5RAP2-218	ENST00000491334	NINL	Q9Y2I6	1382 aa		28.33	■■■□□ 2.13
CDK5RAP2-218	ENST00000491334	ATP7B	P35670	1465 aa		28.33	■■■□□ 2.13
CDK5RAP2-218	ENST00000491334	ABTB2	Q8N961	1025 aa		28.31	■■■□□ 2.12
CDK5RAP2-218	ENST00000491334	RREB1	Q92766	1687 aa		28.3	■■■□□ 2.12
CDK5RAP2-218	ENST00000491334	CDK19	Q9BWU1	502 aa		28.3	■■■□□ 2.12
CDK5RAP2-218	ENST00000491334	ACE	P12821	1306 aa		28.29	■■■□□ 2.12
CDK5RAP2-218	ENST00000491334	CCDC61	Q9Y6R9	512 aa		28.29	■■■□□ 2.12
CDK5RAP2-218	ENST00000491334	NUP188	Q5SRE5	1749 aa		28.28	■■■□□ 2.12
CDK5RAP2-218	ENST00000491334	CPD	O75976	1380 aa		28.26	■■■□□ 2.12
CDK5RAP2-218	ENST00000491334	PLSCR1	O15162	318 aa		28.26	■■■□□ 2.11
CDK5RAP2-218	ENST00000491334	CAMTA1	Q9Y6Y1	1673 aa		28.26	■■■□□ 2.11
CDK5RAP2-218	ENST00000491334	POLR3A	O14802	1390 aa	Predicted RBP	28.25	■■■□□ 2.11
CDK5RAP2-218	ENST00000491334	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.25	■■■□□ 2.11
CDK5RAP2-218	ENST00000491334	PLEKHG3	A1L390	1219 aa		28.25	■■■□□ 2.11
CDK5RAP2-218	ENST00000491334	NLRP13	Q86W25	1043 aa		28.25	■■■□□ 2.11
CDK5RAP2-218	ENST00000491334	ITSN1	Q15811	1721 aa		28.23	■■■□□ 2.11
CDK5RAP2-218	ENST00000491334	GC	P02774	474 aa		28.22	■■■□□ 2.11
CDK5RAP2-218	ENST00000491334	USP19	O94966	1318 aa		28.19	■■■□□ 2.1
CDK5RAP2-218	ENST00000491334	OVOS2	A0A0G2JMS6	1433 aa		28.18	■■■□□ 2.1
CDK5RAP2-218	ENST00000491334	OVOS2	A0A0J9YW53	1432 aa		28.18	■■■□□ 2.1
CDK5RAP2-218	ENST00000491334	OVOS2	Q6IE36	1432 aa		28.18	■■■□□ 2.1
CDK5RAP2-218	ENST00000491334	DDB1	Q16531	1140 aa		28.17	■■■□□ 2.1
CDK5RAP2-218	ENST00000491334	BCL11B	Q9C0K0	894 aa	Predicted RBP	28.17	■■■□□ 2.1
CDK5RAP2-218	ENST00000491334	CRB1	P82279	1406 aa		28.15	■■■□□ 2.1
CDK5RAP2-218	ENST00000491334	NRK	Q7Z2Y5	1582 aa		28.14	■■■□□ 2.1
CDK5RAP2-218	ENST00000491334	LMO7	Q8WWI1	1683 aa		28.13	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.13	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	COL5A2	P05997	1499 aa	Predicted RBP	28.13	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	ZBTB7C	A1YPR0	619 aa		28.12	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	PARP4	Q9UKK3	1724 aa	Known RBP	28.12	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	ZBTB7A	O95365	584 aa		28.11	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.11	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.1	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	TOM1L2	Q6ZVM7	507 aa		28.1	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	PROM2	Q8N271	834 aa		28.09	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	PDGFD	Q9GZP0	370 aa	Predicted RBP	28.09	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	RAB3GAP2	Q9H2M9	1393 aa		28.09	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	SRPK2	P78362	688 aa	Known RBP	28.08	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	BRD4	O60885	1362 aa	Predicted RBP	28.08	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	AATK	Q6ZMQ8	1374 aa		28.08	■■■□□ 2.09
CDK5RAP2-218	ENST00000491334	PTGER2	P43116	358 aa		28.07	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	NLRP6	P59044	892 aa		28.07	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	PTF1A	Q7RTS3	328 aa		28.07	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	CDCA7	Q9BWT1	371 aa	Predicted RBP	28.07	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	ATF5	Q9Y2D1	282 aa	Predicted RBP	28.07	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	STK32B	Q9NY57	414 aa		28.06	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	RGPD3	A6NKT7	1758 aa	Predicted RBP	28.05	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	RGPD4	Q7Z3J3	1758 aa		28.05	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	PEAK1	Q9H792	1746 aa		28.04	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	TOPAZ1	Q8N9V7	1692 aa		28.04	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	MARCH10	Q8NA82	808 aa	Predicted RBP	28.04	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	PPIP5K1	Q6PFW1	1433 aa		28.03	■■■□□ 2.08

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms