RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 TNS1Q9HBL0 1735 aaKnown RBP22.82■■□□□ 1.24
SCAMP3-208ENST00000490999 ADGRB1O14514 1584 aa22.81■■□□□ 1.24
SCAMP3-208ENST00000490999 CRYBG1Q9Y4K1 1723 aa22.81■■□□□ 1.24
SCAMP3-208ENST00000490999 ACIN1Q9UKV3 1341 aaKnown RBP22.81■■□□□ 1.24
SCAMP3-208ENST00000490999 SPATA31A5Q5VU36 1347 aa22.8■■□□□ 1.24
SCAMP3-208ENST00000490999 SPATA31A7Q8IWB4 1347 aa22.8■■□□□ 1.24
SCAMP3-208ENST00000490999 MINK1Q8N4C8 1332 aaPredicted RBP22.8■■□□□ 1.24
SCAMP3-208ENST00000490999 GPRASP1Q5JY77 1395 aa22.79■■□□□ 1.24
SCAMP3-208ENST00000490999 TULP4Q9NRJ4 1543 aa22.79■■□□□ 1.24
SCAMP3-208ENST00000490999 DISP2A7MBM2 1401 aa22.77■■□□□ 1.24
SCAMP3-208ENST00000490999 TRAK1Q9UPV9 953 aa22.77■■□□□ 1.24
SCAMP3-208ENST00000490999 EZH2Q15910 746 aaKnown RBP22.76■■□□□ 1.23
SCAMP3-208ENST00000490999 PRDM11Q9NQV5 511 aa22.76■■□□□ 1.23
SCAMP3-208ENST00000490999 PAK3O75914 559 aaPredicted RBP22.75■■□□□ 1.23
SCAMP3-208ENST00000490999 EIF3AQ14152 1382 aaKnown RBP22.73■■□□□ 1.23
SCAMP3-208ENST00000490999 KIAA0232Q92628 1395 aa22.73■■□□□ 1.23
SCAMP3-208ENST00000490999 TRIM37O94972 964 aa22.72■■□□□ 1.23
SCAMP3-208ENST00000490999 CHRNA2Q15822 529 aa22.72■■□□□ 1.23
SCAMP3-208ENST00000490999 NGDNQ8NEJ9 315 aaKnown RBP22.72■■□□□ 1.23
SCAMP3-208ENST00000490999 STRN4Q9NRL3 753 aa22.71■■□□□ 1.23
SCAMP3-208ENST00000490999 PHRF1Q9P1Y6 1649 aaKnown RBP22.71■■□□□ 1.23
SCAMP3-208ENST00000490999 SPATA31A1Q5TZJ5 1347 aa22.7■■□□□ 1.22
SCAMP3-208ENST00000490999 ATP7BP35670 1465 aa22.69■■□□□ 1.22
SCAMP3-208ENST00000490999 WASLO00401 505 aaPredicted RBP22.69■■□□□ 1.22
SCAMP3-208ENST00000490999 CAMKK2Q96RR4 588 aa22.68■■□□□ 1.22
SCAMP3-208ENST00000490999 USP35Q9P2H5 1018 aa22.68■■□□□ 1.22
SCAMP3-208ENST00000490999 NUTM2GQ5VZR2 741 aa22.67■■□□□ 1.22
SCAMP3-208ENST00000490999 APBA3O96018 575 aa22.65■■□□□ 1.22
SCAMP3-208ENST00000490999 ZC3H6P61129 1189 aaKnown RBP22.65■■□□□ 1.22
SCAMP3-208ENST00000490999 KDM2AQ9Y2K7 1162 aa22.65■■□□□ 1.22
SCAMP3-208ENST00000490999 RREB1Q92766 1687 aa22.64■■□□□ 1.21
SCAMP3-208ENST00000490999 ITSN1Q15811 1721 aa22.63■■□□□ 1.21
SCAMP3-208ENST00000490999 NUP188Q5SRE5 1749 aa22.63■■□□□ 1.21
SCAMP3-208ENST00000490999 FAM196AQ6ZSG2 479 aa22.63■■□□□ 1.21
SCAMP3-208ENST00000490999 SSH2Q76I76 1423 aa22.63■■□□□ 1.21
SCAMP3-208ENST00000490999 NRKQ7Z2Y5 1582 aa22.63■■□□□ 1.21
SCAMP3-208ENST00000490999 ARHGEF28Q8N1W1 1705 aaKnown RBP22.62■■□□□ 1.21
SCAMP3-208ENST00000490999 PARD3Q8TEW0 1356 aa22.61■■□□□ 1.21
SCAMP3-208ENST00000490999 DCAF11Q8TEB1 546 aa22.6■■□□□ 1.21
SCAMP3-208ENST00000490999 NUDT16Q96DE0 195 aaKnown RBP22.6■■□□□ 1.21
SCAMP3-208ENST00000490999 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
SCAMP3-208ENST00000490999 TOPAZ1Q8N9V7 1692 aa22.58■■□□□ 1.21
SCAMP3-208ENST00000490999 PDE3BQ13370 1112 aa22.57■■□□□ 1.2
SCAMP3-208ENST00000490999 LARP1Q6PKG0 1096 aaKnown RBP22.57■■□□□ 1.2
SCAMP3-208ENST00000490999 CAMTA1Q9Y6Y1 1673 aa22.57■■□□□ 1.2
SCAMP3-208ENST00000490999 LMO7Q8WWI1 1683 aa22.55■■□□□ 1.2
SCAMP3-208ENST00000490999 YY1P25490 414 aa22.55■■□□□ 1.2
SCAMP3-208ENST00000490999 EVA1CP58658 441 aa22.55■■□□□ 1.2
SCAMP3-208ENST00000490999 BARGINQ6ZT62 677 aa22.54■■□□□ 1.2
SCAMP3-208ENST00000490999 ACEP12821 1306 aa22.54■■□□□ 1.2
SCAMP3-208ENST00000490999 POLR3AO14802 1390 aaPredicted RBP22.53■■□□□ 1.2
SCAMP3-208ENST00000490999 CDK19Q9BWU1 502 aa22.53■■□□□ 1.2
SCAMP3-208ENST00000490999 TCP11L2Q8N4U5 519 aa22.52■■□□□ 1.2
SCAMP3-208ENST00000490999 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
SCAMP3-208ENST00000490999 NBPF14Q5TI25 921 aa22.5■■□□□ 1.19
SCAMP3-208ENST00000490999 USP19O94966 1318 aa22.5■■□□□ 1.19
SCAMP3-208ENST00000490999 COL5A2P05997 1499 aaPredicted RBP22.49■■□□□ 1.19
SCAMP3-208ENST00000490999 ABTB2Q8N961 1025 aa22.49■■□□□ 1.19
SCAMP3-208ENST00000490999 PPP1R1BQ9UD71 204 aaPredicted RBP22.49■■□□□ 1.19
SCAMP3-208ENST00000490999 CPDO75976 1380 aa22.49■■□□□ 1.19
SCAMP3-208ENST00000490999 ZBTB7CA1YPR0 619 aa22.47■■□□□ 1.19
SCAMP3-208ENST00000490999 PARP4Q9UKK3 1724 aaKnown RBP22.47■■□□□ 1.19
SCAMP3-208ENST00000490999 UTRNP46939 3433 aa22.46■■□□□ 1.19
SCAMP3-208ENST00000490999 LRRC37A3O60309 1634 aa22.46■■□□□ 1.19
SCAMP3-208ENST00000490999 SPON1Q9HCB6 807 aa22.45■■□□□ 1.18
SCAMP3-208ENST00000490999 CCDC61Q9Y6R9 512 aa22.45■■□□□ 1.18
SCAMP3-208ENST00000490999 OVOS2A0A0G2JMS6 1433 aa22.44■■□□□ 1.18
SCAMP3-208ENST00000490999 OVOS2A0A0J9YW53 1432 aa22.44■■□□□ 1.18
SCAMP3-208ENST00000490999 OVOS2Q6IE36 1432 aa22.44■■□□□ 1.18
SCAMP3-208ENST00000490999 PEAK1Q9H792 1746 aa22.44■■□□□ 1.18
SCAMP3-208ENST00000490999 ANO8Q9HCE9 1232 aaPredicted RBP22.44■■□□□ 1.18
SCAMP3-208ENST00000490999 PPIP5K1Q6PFW1 1433 aa22.43■■□□□ 1.18
SCAMP3-208ENST00000490999 KCNQ2O43526 872 aa22.43■■□□□ 1.18
SCAMP3-208ENST00000490999 CRB1P82279 1406 aa22.42■■□□□ 1.18
SCAMP3-208ENST00000490999 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
SCAMP3-208ENST00000490999 PLEKHG3A1L390 1219 aa22.42■■□□□ 1.18
SCAMP3-208ENST00000490999 GCP02774 474 aa22.41■■□□□ 1.18
SCAMP3-208ENST00000490999 PTF1AQ7RTS3 328 aa22.41■■□□□ 1.18
SCAMP3-208ENST00000490999 THRAP3Q9Y2W1 955 aaKnown RBP22.41■■□□□ 1.18
SCAMP3-208ENST00000490999 CASZ1Q86V15 1759 aa22.38■■□□□ 1.17
SCAMP3-208ENST00000490999 SRPK2P78362 688 aaKnown RBP22.38■■□□□ 1.17
SCAMP3-208ENST00000490999 NLRP13Q86W25 1043 aa22.38■■□□□ 1.17
SCAMP3-208ENST00000490999 PDGFDQ9GZP0 370 aaPredicted RBP22.38■■□□□ 1.17
SCAMP3-208ENST00000490999 RGPD3A6NKT7 1758 aaPredicted RBP22.38■■□□□ 1.17
SCAMP3-208ENST00000490999 RGPD4Q7Z3J3 1758 aa22.38■■□□□ 1.17
SCAMP3-208ENST00000490999 STAC3Q96MF2 364 aa22.37■■□□□ 1.17
SCAMP3-208ENST00000490999 CABP2Q9NPB3 220 aa22.37■■□□□ 1.17
SCAMP3-208ENST00000490999 SLIT3O75094 1523 aa22.36■■□□□ 1.17
SCAMP3-208ENST00000490999 MYOM1P52179 1685 aa22.36■■□□□ 1.17
SCAMP3-208ENST00000490999 NBPF1Q3BBV0 1214 aa22.35■■□□□ 1.17
SCAMP3-208ENST00000490999 ZBTB7AO95365 584 aa22.34■■□□□ 1.17
SCAMP3-208ENST00000490999 DDB1Q16531 1140 aa22.34■■□□□ 1.17
SCAMP3-208ENST00000490999 WNK3Q9BYP7 1800 aa22.34■■□□□ 1.17
SCAMP3-208ENST00000490999 USP6P35125 1406 aa22.33■■□□□ 1.17
SCAMP3-208ENST00000490999 DCAF8L1A6NGE4 600 aa22.33■■□□□ 1.17
SCAMP3-208ENST00000490999 TOM1L2Q6ZVM7 507 aa22.33■■□□□ 1.17
SCAMP3-208ENST00000490999 KIAA1210Q9ULL0 1709 aa22.33■■□□□ 1.17
SCAMP3-208ENST00000490999 AATKQ6ZMQ8 1374 aa22.33■■□□□ 1.17
SCAMP3-208ENST00000490999 PIK3C2AO00443 1686 aa22.33■■□□□ 1.16
SCAMP3-208ENST00000490999 SBF2Q86WG5 1849 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms