RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
CRNKL1-204ENST00000490910 TNNQ9UQP3 1299 aa13.59□□□□□ -0.23
CRNKL1-204ENST00000490910 DIAPH1O60610 1272 aaKnown RBP13.59□□□□□ -0.23
CRNKL1-204ENST00000490910 GNL2Q13823 731 aaKnown RBP13.59□□□□□ -0.23
CRNKL1-204ENST00000490910 MYRIPQ8NFW9 859 aa13.59□□□□□ -0.23
CRNKL1-204ENST00000490910 PRDM2Q13029 1718 aa13.59□□□□□ -0.23
CRNKL1-204ENST00000490910 USP19O94966 1318 aa13.59□□□□□ -0.23
CRNKL1-204ENST00000490910 BICD2Q8TD16 824 aa13.59□□□□□ -0.23
CRNKL1-204ENST00000490910 CWC15Q9P013 229 aaKnown RBP13.59□□□□□ -0.23
CRNKL1-204ENST00000490910 UVSSAQ2YD98 709 aa13.58□□□□□ -0.23
CRNKL1-204ENST00000490910 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.58□□□□□ -0.24
CRNKL1-204ENST00000490910 MNS1Q8NEH6 495 aa13.58□□□□□ -0.24
CRNKL1-204ENST00000490910 STK26Q9P289 416 aa13.58□□□□□ -0.24
CRNKL1-204ENST00000490910 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.24
CRNKL1-204ENST00000490910 TCOF1Q13428 1488 aaKnown RBP13.58□□□□□ -0.24
CRNKL1-204ENST00000490910 TSPYL1Q9H0U9 437 aa13.57□□□□□ -0.24
CRNKL1-204ENST00000490910 TTC12Q9H892 705 aaPredicted RBP13.57□□□□□ -0.24
CRNKL1-204ENST00000490910 NOM1Q5C9Z4 860 aaKnown RBP13.57□□□□□ -0.24
CRNKL1-204ENST00000490910 CCDC183Q5T5S1 534 aa13.57□□□□□ -0.24
CRNKL1-204ENST00000490910 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
CRNKL1-204ENST00000490910 GNAI1P63096 354 aa13.57□□□□□ -0.24
CRNKL1-204ENST00000490910 TIGD1Q96MW7 591 aa13.57□□□□□ -0.24
CRNKL1-204ENST00000490910 NUCB1Q02818 461 aa13.57□□□□□ -0.24
CRNKL1-204ENST00000490910 STK31Q9BXU1 1019 aa13.57□□□□□ -0.24
CRNKL1-204ENST00000490910 DMTNQ08495 405 aa13.56□□□□□ -0.24
CRNKL1-204ENST00000490910 UTP14CQ5TAP6 766 aaKnown RBP13.56□□□□□ -0.24
CRNKL1-204ENST00000490910 CCAR2Q8N163 923 aaKnown RBP13.56□□□□□ -0.24
CRNKL1-204ENST00000490910 GRIN2BQ13224 1484 aa13.56□□□□□ -0.24
CRNKL1-204ENST00000490910 FAM177BA6PVY3 158 aa13.55□□□□□ -0.24
CRNKL1-204ENST00000490910 TROQ12816 1431 aaPredicted RBP13.55□□□□□ -0.24
CRNKL1-204ENST00000490910 EVC2Q86UK5 1308 aa13.55□□□□□ -0.24
CRNKL1-204ENST00000490910 PRG4Q92954 1404 aaPredicted RBP13.55□□□□□ -0.24
CRNKL1-204ENST00000490910 EFCAB2Q5VUJ9 269 aa13.55□□□□□ -0.24
CRNKL1-204ENST00000490910 RTF1Q92541 710 aaKnown RBP13.54□□□□□ -0.24
CRNKL1-204ENST00000490910 FEZ1Q99689 392 aa13.54□□□□□ -0.24
CRNKL1-204ENST00000490910 ZMYM3Q14202 1370 aa13.54□□□□□ -0.24
CRNKL1-204ENST00000490910 C16orf45Q96MC5 204 aaPredicted RBP13.54□□□□□ -0.24
CRNKL1-204ENST00000490910 TRERF1Q96PN7 1200 aa13.54□□□□□ -0.24
CRNKL1-204ENST00000490910 CFAP70Q5T0N1 1121 aa13.54□□□□□ -0.24
CRNKL1-204ENST00000490910 TESK2Q96S53 571 aa13.54□□□□□ -0.24
CRNKL1-204ENST00000490910 GDPD2Q9HCC8 539 aa13.54□□□□□ -0.24
CRNKL1-204ENST00000490910 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
CRNKL1-204ENST00000490910 TNNT1P13805 278 aa13.53□□□□□ -0.24
CRNKL1-204ENST00000490910 THOC2Q8NI27 1593 aaKnown RBP13.53□□□□□ -0.24
CRNKL1-204ENST00000490910 KIF3BO15066 747 aa13.53□□□□□ -0.24
CRNKL1-204ENST00000490910 HCLS1P14317 486 aaPredicted RBP13.53□□□□□ -0.24
CRNKL1-204ENST00000490910 SLC12A5Q9H2X9 1139 aa13.53□□□□□ -0.24
CRNKL1-204ENST00000490910 H3BQV1 296 aa13.53□□□□□ -0.24
CRNKL1-204ENST00000490910 IFFO2Q5TF58 517 aa13.53□□□□□ -0.24
CRNKL1-204ENST00000490910 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
CRNKL1-204ENST00000490910 CAMSAP2Q08AD1 1489 aa13.53□□□□□ -0.24
CRNKL1-204ENST00000490910 SNAPC4Q5SXM2 1469 aa13.53□□□□□ -0.24
CRNKL1-204ENST00000490910 KIF14Q15058 1648 aa13.53□□□□□ -0.24
CRNKL1-204ENST00000490910 UHRF1BP1Q6BDS2 1440 aa13.52□□□□□ -0.24
CRNKL1-204ENST00000490910 KRT222Q8N1A0 295 aa13.52□□□□□ -0.24
CRNKL1-204ENST00000490910 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.52□□□□□ -0.24
CRNKL1-204ENST00000490910 ZNF428Q96B54 188 aa13.52□□□□□ -0.25
CRNKL1-204ENST00000490910 DNAJC2Q99543 621 aaKnown RBP13.52□□□□□ -0.25
CRNKL1-204ENST00000490910 HMGXB3Q12766 1538 aa13.52□□□□□ -0.25
CRNKL1-204ENST00000490910 HSP90B1P14625 803 aaKnown RBP13.51□□□□□ -0.25
CRNKL1-204ENST00000490910 ZKSCAN1P17029 563 aaPredicted RBP13.51□□□□□ -0.25
CRNKL1-204ENST00000490910 TMPOP42166 694 aaKnown RBP13.51□□□□□ -0.25
CRNKL1-204ENST00000490910 AEBP1Q8IUX7 1158 aa13.51□□□□□ -0.25
CRNKL1-204ENST00000490910 APPP05067 770 aa13.51□□□□□ -0.25
CRNKL1-204ENST00000490910 PIBF1Q8WXW3 757 aa13.51□□□□□ -0.25
CRNKL1-204ENST00000490910 TSC1Q92574 1164 aa13.51□□□□□ -0.25
CRNKL1-204ENST00000490910 GGNBP2Q9H3C7 697 aa13.51□□□□□ -0.25
CRNKL1-204ENST00000490910 OGFRQ9NZT2 677 aa13.51□□□□□ -0.25
CRNKL1-204ENST00000490910 ABCA10Q8WWZ4 1543 aa13.51□□□□□ -0.25
CRNKL1-204ENST00000490910 CUL7Q14999 1698 aa13.51□□□□□ -0.25
CRNKL1-204ENST00000490910 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 TNMDQ9H2S6 317 aa13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 SPAG9O60271 1321 aaKnown RBP13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 LMBRD1Q9NUN5 540 aa13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 U2AF2P26368 475 aaKnown RBP eCLIP13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 GORABQ5T7V8 394 aa13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 RUFY2Q8WXA3 655 aa13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 GPATCH3Q96I76 525 aa13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 JPH4Q96JJ6 628 aa13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 ARHGEF12Q9NZN5 1544 aa13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 PTPN14Q15678 1187 aa13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 TWISTNBQ3B726 338 aaPredicted RBP13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
CRNKL1-204ENST00000490910 SF3A1Q15459 793 aaKnown RBP13.49□□□□□ -0.25
CRNKL1-204ENST00000490910 RNF20Q5VTR2 975 aa13.49□□□□□ -0.25
CRNKL1-204ENST00000490910 NUP62CLQ9H1M0 184 aa13.49□□□□□ -0.25
CRNKL1-204ENST00000490910 PRAG1Q86YV5 1406 aa13.49□□□□□ -0.25
CRNKL1-204ENST00000490910 AK7Q96M32 723 aa13.49□□□□□ -0.25
CRNKL1-204ENST00000490910 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
CRNKL1-204ENST00000490910 ASXL1Q8IXJ9 1541 aa13.49□□□□□ -0.25
CRNKL1-204ENST00000490910 ALDH1L2Q3SY69 923 aa13.49□□□□□ -0.25
CRNKL1-204ENST00000490910 PZPP20742 1482 aa13.48□□□□□ -0.25
CRNKL1-204ENST00000490910 MAP3K11Q16584 847 aa13.48□□□□□ -0.25
CRNKL1-204ENST00000490910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.48□□□□□ -0.25
CRNKL1-204ENST00000490910 UPF3BQ9BZI7 483 aaKnown RBP13.48□□□□□ -0.25
CRNKL1-204ENST00000490910 VGLL3A8MV65 326 aa13.48□□□□□ -0.25
CRNKL1-204ENST00000490910 KRT85P78386 507 aa13.48□□□□□ -0.25
CRNKL1-204ENST00000490910 ZGPATQ8N5A5 531 aaKnown RBP13.48□□□□□ -0.25
CRNKL1-204ENST00000490910 IBTKQ9P2D0 1353 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms