RNA–Protein interactions for RNA: ENST00000490821.1

ALMS1-205, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-205ENST00000490821 ARHGEF10O15013 1369 aa11.91□□□□□ -0.5
ALMS1-205ENST00000490821 PSME1Q06323 249 aa11.9□□□□□ -0.5
ALMS1-205ENST00000490821 BTG4Q9NY30 223 aa11.9□□□□□ -0.5
ALMS1-205ENST00000490821 RRBP1Q9P2E9 1410 aaKnown RBP11.9□□□□□ -0.5
ALMS1-205ENST00000490821 SPATA31A5Q5VU36 1347 aa11.89□□□□□ -0.51
ALMS1-205ENST00000490821 SPATA31A7Q8IWB4 1347 aa11.89□□□□□ -0.51
ALMS1-205ENST00000490821 CRYBG1Q9Y4K1 1723 aa11.89□□□□□ -0.51
ALMS1-205ENST00000490821 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
ALMS1-205ENST00000490821 ALS2Q96Q42 1657 aa11.89□□□□□ -0.51
ALMS1-205ENST00000490821 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
ALMS1-205ENST00000490821 YTHDC2Q9H6S0 1430 aaKnown RBP11.87□□□□□ -0.51
ALMS1-205ENST00000490821 PARD3Q8TEW0 1356 aa11.87□□□□□ -0.51
ALMS1-205ENST00000490821 CAMTA1Q9Y6Y1 1673 aa11.87□□□□□ -0.51
ALMS1-205ENST00000490821 PIK3C2GO75747 1445 aa11.86□□□□□ -0.51
ALMS1-205ENST00000490821 TRIM37O94972 964 aa11.86□□□□□ -0.51
ALMS1-205ENST00000490821 SPATA31E1Q6ZUB1 1445 aa11.86□□□□□ -0.51
ALMS1-205ENST00000490821 SIRT1Q96EB6 747 aa11.85□□□□□ -0.51
ALMS1-205ENST00000490821 ANKRD30BQ9BXX2 1392 aa11.83□□□□□ -0.52
ALMS1-205ENST00000490821 NINLQ9Y2I6 1382 aa11.83□□□□□ -0.52
ALMS1-205ENST00000490821 APBA3O96018 575 aa11.83□□□□□ -0.52
ALMS1-205ENST00000490821 FAM196AQ6ZSG2 479 aa11.83□□□□□ -0.52
ALMS1-205ENST00000490821 PMFBP1Q8TBY8 1022 aa11.83□□□□□ -0.52
ALMS1-205ENST00000490821 ANKARQ7Z5J8 1434 aa11.83□□□□□ -0.52
ALMS1-205ENST00000490821 SPATA31A1Q5TZJ5 1347 aa11.83□□□□□ -0.52
ALMS1-205ENST00000490821 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
ALMS1-205ENST00000490821 RGL3Q3MIN7 710 aa11.81□□□□□ -0.52
ALMS1-205ENST00000490821 SPON1Q9HCB6 807 aa11.81□□□□□ -0.52
ALMS1-205ENST00000490821 KCNQ2O43526 872 aa11.8□□□□□ -0.52
ALMS1-205ENST00000490821 SAFB2Q14151 953 aaKnown RBP eCLIP11.79□□□□□ -0.52
ALMS1-205ENST00000490821 NBPF8Q3BBV2 869 aa11.79□□□□□ -0.52
ALMS1-205ENST00000490821 NBPF14Q5TI25 921 aa11.79□□□□□ -0.52
ALMS1-205ENST00000490821 PRAM1Q96QH2 718 aa11.79□□□□□ -0.52
ALMS1-205ENST00000490821 PRDM11Q9NQV5 511 aa11.79□□□□□ -0.52
ALMS1-205ENST00000490821 PPP1R1BQ9UD71 204 aaPredicted RBP11.79□□□□□ -0.52
ALMS1-205ENST00000490821 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
ALMS1-205ENST00000490821 CASZ1Q86V15 1759 aa11.79□□□□□ -0.52
ALMS1-205ENST00000490821 PHRF1Q9P1Y6 1649 aaKnown RBP11.78□□□□□ -0.52
ALMS1-205ENST00000490821 CHD4Q14839 1912 aa11.78□□□□□ -0.52
ALMS1-205ENST00000490821 ZNF784Q8NCA9 323 aaPredicted RBP11.78□□□□□ -0.52
ALMS1-205ENST00000490821 C14orf93Q9H972 538 aaKnown RBP11.78□□□□□ -0.52
ALMS1-205ENST00000490821 KIAA0232Q92628 1395 aa11.78□□□□□ -0.52
ALMS1-205ENST00000490821 RGPD3A6NKT7 1758 aaPredicted RBP11.77□□□□□ -0.52
ALMS1-205ENST00000490821 RGPD4Q7Z3J3 1758 aa11.77□□□□□ -0.52
ALMS1-205ENST00000490821 DLC1Q96QB1 1528 aa11.77□□□□□ -0.52
ALMS1-205ENST00000490821 CEP350Q5VT06 3117 aa11.77□□□□□ -0.53
ALMS1-205ENST00000490821 NRKQ7Z2Y5 1582 aa11.77□□□□□ -0.53
ALMS1-205ENST00000490821 PRR36Q9H6K5 1346 aa11.77□□□□□ -0.53
ALMS1-205ENST00000490821 GPRASP1Q5JY77 1395 aa11.77□□□□□ -0.53
ALMS1-205ENST00000490821 CHRNA2Q15822 529 aa11.76□□□□□ -0.53
ALMS1-205ENST00000490821 SBF2Q86WG5 1849 aa11.76□□□□□ -0.53
ALMS1-205ENST00000490821 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
ALMS1-205ENST00000490821 MYOM1P52179 1685 aa11.75□□□□□ -0.53
ALMS1-205ENST00000490821 CAPN15O75808 1086 aa11.75□□□□□ -0.53
ALMS1-205ENST00000490821 CFAP70Q5T0N1 1121 aa11.75□□□□□ -0.53
ALMS1-205ENST00000490821 BARGINQ6ZT62 677 aa11.75□□□□□ -0.53
ALMS1-205ENST00000490821 PPARGC1BQ86YN6 1023 aaKnown RBP11.75□□□□□ -0.53
ALMS1-205ENST00000490821 STRN4Q9NRL3 753 aa11.75□□□□□ -0.53
ALMS1-205ENST00000490821 SSH2Q76I76 1423 aa11.75□□□□□ -0.53
ALMS1-205ENST00000490821 TULP4Q9NRJ4 1543 aa11.75□□□□□ -0.53
ALMS1-205ENST00000490821 PEAK1Q9H792 1746 aa11.74□□□□□ -0.53
ALMS1-205ENST00000490821 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
ALMS1-205ENST00000490821 GOLGB1Q14789 3259 aaKnown RBP11.74□□□□□ -0.53
ALMS1-205ENST00000490821 SENP3-EIF4A1A0A087X0R7 540 aa11.74□□□□□ -0.53
ALMS1-205ENST00000490821 PDE3BQ13370 1112 aa11.74□□□□□ -0.53
ALMS1-205ENST00000490821 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
ALMS1-205ENST00000490821 FOXD4L1Q9NU39 408 aa11.74□□□□□ -0.53
ALMS1-205ENST00000490821 USP35Q9P2H5 1018 aa11.74□□□□□ -0.53
ALMS1-205ENST00000490821 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
ALMS1-205ENST00000490821 LMO7Q8WWI1 1683 aa11.73□□□□□ -0.53
ALMS1-205ENST00000490821 PDGFDQ9GZP0 370 aaPredicted RBP11.73□□□□□ -0.53
ALMS1-205ENST00000490821 ANO8Q9HCE9 1232 aaPredicted RBP11.73□□□□□ -0.53
ALMS1-205ENST00000490821 ADGRB1O14514 1584 aa11.72□□□□□ -0.53
ALMS1-205ENST00000490821 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
ALMS1-205ENST00000490821 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
ALMS1-205ENST00000490821 HIRIP3Q9BW71 556 aaPredicted RBP11.72□□□□□ -0.53
ALMS1-205ENST00000490821 POGKQ9P215 609 aa11.72□□□□□ -0.53
ALMS1-205ENST00000490821 EIF3AQ14152 1382 aaKnown RBP11.71□□□□□ -0.53
ALMS1-205ENST00000490821 PTGER2P43116 358 aa11.71□□□□□ -0.53
ALMS1-205ENST00000490821 C1QTNF8P60827 252 aa11.71□□□□□ -0.53
ALMS1-205ENST00000490821 ZC3H6P61129 1189 aaKnown RBP11.71□□□□□ -0.53
ALMS1-205ENST00000490821 LARP1Q6PKG0 1096 aaKnown RBP11.71□□□□□ -0.53
ALMS1-205ENST00000490821 ITSN1Q15811 1721 aa11.71□□□□□ -0.54
ALMS1-205ENST00000490821 TCP11L2Q8N4U5 519 aa11.7□□□□□ -0.54
ALMS1-205ENST00000490821 NGDNQ8NEJ9 315 aaKnown RBP11.7□□□□□ -0.54
ALMS1-205ENST00000490821 ATP7BP35670 1465 aa11.7□□□□□ -0.54
ALMS1-205ENST00000490821 MINK1Q8N4C8 1332 aaPredicted RBP11.69□□□□□ -0.54
ALMS1-205ENST00000490821 WASLO00401 505 aaPredicted RBP11.69□□□□□ -0.54
ALMS1-205ENST00000490821 LRRC37A3O60309 1634 aa11.68□□□□□ -0.54
ALMS1-205ENST00000490821 PLSCR1O15162 318 aa11.68□□□□□ -0.54
ALMS1-205ENST00000490821 ZBTB22O15209 634 aa11.68□□□□□ -0.54
ALMS1-205ENST00000490821 ZBTB7AO95365 584 aa11.68□□□□□ -0.54
ALMS1-205ENST00000490821 DSG3P32926 999 aa11.68□□□□□ -0.54
ALMS1-205ENST00000490821 EVA1CP58658 441 aa11.68□□□□□ -0.54
ALMS1-205ENST00000490821 MPHOSPH9Q99550 1183 aa11.68□□□□□ -0.54
ALMS1-205ENST00000490821 OVOS2A0A0G2JMS6 1433 aa11.68□□□□□ -0.54
ALMS1-205ENST00000490821 OVOS2A0A0J9YW53 1432 aa11.68□□□□□ -0.54
ALMS1-205ENST00000490821 OVOS2Q6IE36 1432 aa11.68□□□□□ -0.54
ALMS1-205ENST00000490821 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
ALMS1-205ENST00000490821 PTF1AQ7RTS3 328 aa11.67□□□□□ -0.54
ALMS1-205ENST00000490821 PROM2Q8N271 834 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms