RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TRPM2O94759 1503 aa11.5□□□□□ -0.57
PDLIM1-203ENST00000490391 LAMC1P11047 1609 aa11.49□□□□□ -0.57
PDLIM1-203ENST00000490391 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
PDLIM1-203ENST00000490391 KANK1Q14678 1352 aa11.49□□□□□ -0.57
PDLIM1-203ENST00000490391 XRN1Q8IZH2 1706 aaKnown RBP11.49□□□□□ -0.57
PDLIM1-203ENST00000490391 HOXB1P14653 301 aaPredicted RBP11.48□□□□□ -0.57
PDLIM1-203ENST00000490391 PTCH1Q13635 1447 aa11.48□□□□□ -0.57
PDLIM1-203ENST00000490391 CROCC2H7BZ55 1655 aa11.47□□□□□ -0.57
PDLIM1-203ENST00000490391 MYOM3Q5VTT5 1437 aa11.47□□□□□ -0.57
PDLIM1-203ENST00000490391 PPP1R15AO75807 674 aaPredicted RBP11.47□□□□□ -0.57
PDLIM1-203ENST00000490391 DEFB132Q7Z7B7 95 aa11.47□□□□□ -0.57
PDLIM1-203ENST00000490391 AMOTL2Q9Y2J4 779 aa11.46□□□□□ -0.57
PDLIM1-203ENST00000490391 ERBB3P21860 1342 aa11.45□□□□□ -0.58
PDLIM1-203ENST00000490391 COL22A1Q8NFW1 1626 aaPredicted RBP11.45□□□□□ -0.58
PDLIM1-203ENST00000490391 RPRD2Q5VT52 1461 aaKnown RBP11.44□□□□□ -0.58
PDLIM1-203ENST00000490391 ABCC5O15440 1437 aa11.44□□□□□ -0.58
PDLIM1-203ENST00000490391 SOS2Q07890 1332 aaPredicted RBP11.44□□□□□ -0.58
PDLIM1-203ENST00000490391 HRCP23327 699 aa11.44□□□□□ -0.58
PDLIM1-203ENST00000490391 HDGFP51858 240 aaKnown RBP11.44□□□□□ -0.58
PDLIM1-203ENST00000490391 RRP7BPQ9NSQ0 103 aa11.44□□□□□ -0.58
PDLIM1-203ENST00000490391 UNC13BO14795 1591 aa11.44□□□□□ -0.58
PDLIM1-203ENST00000490391 MYOM2P54296 1465 aa11.44□□□□□ -0.58
PDLIM1-203ENST00000490391 ADGRL3Q9HAR2 1447 aa11.43□□□□□ -0.58
PDLIM1-203ENST00000490391 GLI3P10071 1580 aa11.43□□□□□ -0.58
PDLIM1-203ENST00000490391 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
PDLIM1-203ENST00000490391 ZNF710Q8N1W2 664 aa11.43□□□□□ -0.58
PDLIM1-203ENST00000490391 SPHKAPQ2M3C7 1700 aa11.43□□□□□ -0.58
PDLIM1-203ENST00000490391 NRXN3Q9Y4C0 1643 aa11.42□□□□□ -0.58
PDLIM1-203ENST00000490391 BRWD3Q6RI45 1802 aa11.42□□□□□ -0.58
PDLIM1-203ENST00000490391 UTRNP46939 3433 aa11.42□□□□□ -0.58
PDLIM1-203ENST00000490391 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.42□□□□□ -0.58
PDLIM1-203ENST00000490391 GJD4Q96KN9 370 aaPredicted RBP11.42□□□□□ -0.58
PDLIM1-203ENST00000490391 NALCNQ8IZF0 1738 aa11.42□□□□□ -0.58
PDLIM1-203ENST00000490391 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.41□□□□□ -0.58
PDLIM1-203ENST00000490391 MARF1Q9Y4F3 1742 aaKnown RBP11.41□□□□□ -0.58
PDLIM1-203ENST00000490391 C1orf167Q5SNV9 1468 aa11.41□□□□□ -0.58
PDLIM1-203ENST00000490391 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
PDLIM1-203ENST00000490391 PSEN1P49768 467 aa11.41□□□□□ -0.58
PDLIM1-203ENST00000490391 CEP350Q5VT06 3117 aa11.4□□□□□ -0.58
PDLIM1-203ENST00000490391 RALGAPBQ86X10 1494 aa11.39□□□□□ -0.59
PDLIM1-203ENST00000490391 DOK7Q18PE1 504 aa11.39□□□□□ -0.59
PDLIM1-203ENST00000490391 BOLA1Q9Y3E2 137 aa11.39□□□□□ -0.59
PDLIM1-203ENST00000490391 CHRM1P11229 460 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1-203ENST00000490391 YY1P25490 414 aa11.38□□□□□ -0.59
PDLIM1-203ENST00000490391 GSE1Q14687 1217 aa11.38□□□□□ -0.59
PDLIM1-203ENST00000490391 DAPK1P53355 1430 aa11.37□□□□□ -0.59
PDLIM1-203ENST00000490391 G3V3G9 751 aa11.37□□□□□ -0.59
PDLIM1-203ENST00000490391 SLIT2O94813 1529 aa11.36□□□□□ -0.59
PDLIM1-203ENST00000490391 METP08581 1390 aa11.36□□□□□ -0.59
PDLIM1-203ENST00000490391 PTPN23Q9H3S7 1636 aa11.35□□□□□ -0.59
PDLIM1-203ENST00000490391 VARS2Q5ST30 1063 aaKnown RBP11.35□□□□□ -0.59
PDLIM1-203ENST00000490391 IFFO2Q5TF58 517 aa11.35□□□□□ -0.59
PDLIM1-203ENST00000490391 ORAI2Q96SN7 254 aa11.35□□□□□ -0.59
PDLIM1-203ENST00000490391 ANKRD30AQ9BXX3 1397 aa11.34□□□□□ -0.59
PDLIM1-203ENST00000490391 SF3B2Q13435 895 aaKnown RBP11.34□□□□□ -0.59
PDLIM1-203ENST00000490391 PXDNQ92626 1479 aa11.33□□□□□ -0.6
PDLIM1-203ENST00000490391 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
PDLIM1-203ENST00000490391 KANK4Q5T7N3 995 aaPredicted RBP11.33□□□□□ -0.6
PDLIM1-203ENST00000490391 UNC5CLQ8IV45 518 aa11.33□□□□□ -0.6
PDLIM1-203ENST00000490391 SEPT12Q8IYM1 358 aa11.32□□□□□ -0.6
PDLIM1-203ENST00000490391 ZNF687Q8N1G0 1237 aa11.32□□□□□ -0.6
PDLIM1-203ENST00000490391 E9PCH4 1651 aa11.32□□□□□ -0.6
PDLIM1-203ENST00000490391 IQGAP3Q86VI3 1631 aa11.31□□□□□ -0.6
PDLIM1-203ENST00000490391 RIMBP2O15034 1052 aa11.31□□□□□ -0.6
PDLIM1-203ENST00000490391 PTGER2P43116 358 aa11.31□□□□□ -0.6
PDLIM1-203ENST00000490391 ADGRL2O95490 1459 aa11.31□□□□□ -0.6
PDLIM1-203ENST00000490391 ONECUT3O60422 494 aaPredicted RBP11.3□□□□□ -0.6
PDLIM1-203ENST00000490391 BAG6P46379 1132 aa11.3□□□□□ -0.6
PDLIM1-203ENST00000490391 R3HDM1Q15032 1099 aaKnown RBP11.3□□□□□ -0.6
PDLIM1-203ENST00000490391 CHIC2Q9UKJ5 165 aa11.3□□□□□ -0.6
PDLIM1-203ENST00000490391 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
PDLIM1-203ENST00000490391 KRT27Q7Z3Y8 459 aa11.28□□□□□ -0.6
PDLIM1-203ENST00000490391 USP32Q8NFA0 1604 aa11.27□□□□□ -0.6
PDLIM1-203ENST00000490391 DISP2A7MBM2 1401 aa11.27□□□□□ -0.6
PDLIM1-203ENST00000490391 PRAG1Q86YV5 1406 aa11.27□□□□□ -0.6
PDLIM1-203ENST00000490391 ANKRD50Q9ULJ7 1429 aa11.27□□□□□ -0.6
PDLIM1-203ENST00000490391 EN1Q05925 392 aaPredicted RBP11.27□□□□□ -0.61
PDLIM1-203ENST00000490391 NPHP3Q7Z494 1330 aa11.27□□□□□ -0.61
PDLIM1-203ENST00000490391 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
PDLIM1-203ENST00000490391 RGPD1P0DJD0 1748 aa11.26□□□□□ -0.61
PDLIM1-203ENST00000490391 VPS72Q15906 364 aa11.26□□□□□ -0.61
PDLIM1-203ENST00000490391 CABP2Q9NPB3 220 aa11.26□□□□□ -0.61
PDLIM1-203ENST00000490391 TNS1Q9HBL0 1735 aaKnown RBP11.26□□□□□ -0.61
PDLIM1-203ENST00000490391 VPS8Q8N3P4 1428 aa11.26□□□□□ -0.61
PDLIM1-203ENST00000490391 PLCH1Q4KWH8 1693 aa11.25□□□□□ -0.61
PDLIM1-203ENST00000490391 ZSWIM6Q9HCJ5 1215 aa11.25□□□□□ -0.61
PDLIM1-203ENST00000490391 NWD2Q9ULI1 1742 aa11.25□□□□□ -0.61
PDLIM1-203ENST00000490391 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
PDLIM1-203ENST00000490391 XPCQ01831 940 aaPredicted RBP11.23□□□□□ -0.61
PDLIM1-203ENST00000490391 NEXMIFQ5QGS0 1516 aa11.23□□□□□ -0.61
PDLIM1-203ENST00000490391 FOXO3O43524 673 aa11.21□□□□□ -0.61
PDLIM1-203ENST00000490391 KLHL34Q8N239 644 aa11.21□□□□□ -0.61
PDLIM1-203ENST00000490391 FBXO3Q9UK99 471 aa11.21□□□□□ -0.61
PDLIM1-203ENST00000490391 CAMTA1Q9Y6Y1 1673 aa11.2□□□□□ -0.62
PDLIM1-203ENST00000490391 SPATA31A3Q5VYP0 1347 aa11.2□□□□□ -0.62
PDLIM1-203ENST00000490391 SENP3-EIF4A1A0A087X0R7 540 aa11.2□□□□□ -0.62
PDLIM1-203ENST00000490391 FKBP8Q14318 412 aa11.2□□□□□ -0.62
PDLIM1-203ENST00000490391 EZH2Q15910 746 aaKnown RBP11.2□□□□□ -0.62
PDLIM1-203ENST00000490391 ESCO1Q5FWF5 840 aa11.2□□□□□ -0.62
PDLIM1-203ENST00000490391 GPR153Q6NV75 609 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms