RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 HDGFL1Q5TGJ6 251 aa10.88□□□□□ -0.67
TM9SF3-206ENST00000490192 NUTM2DQ5VT03 806 aaPredicted RBP10.88□□□□□ -0.67
TM9SF3-206ENST00000490192 NUTM2AQ8IVF1 878 aaPredicted RBP10.88□□□□□ -0.67
TM9SF3-206ENST00000490192 PATL2C9JE40 543 aaKnown RBP10.87□□□□□ -0.67
TM9SF3-206ENST00000490192 RFX1P22670 979 aa10.87□□□□□ -0.67
TM9SF3-206ENST00000490192 CABLES1Q8TDN4 633 aa10.87□□□□□ -0.67
TM9SF3-206ENST00000490192 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.86□□□□□ -0.67
TM9SF3-206ENST00000490192 ADAMTS19Q8TE59 1207 aa10.86□□□□□ -0.67
TM9SF3-206ENST00000490192 NDUFB9Q9Y6M9 179 aa10.86□□□□□ -0.67
TM9SF3-206ENST00000490192 HOXA2O43364 376 aa10.85□□□□□ -0.67
TM9SF3-206ENST00000490192 RNF19BQ6ZMZ0 732 aa10.85□□□□□ -0.67
TM9SF3-206ENST00000490192 Q6ZNB5 142 aa10.85□□□□□ -0.67
TM9SF3-206ENST00000490192 FAM160A2Q8N612 972 aaPredicted RBP10.85□□□□□ -0.67
TM9SF3-206ENST00000490192 GJD4Q96KN9 370 aaPredicted RBP10.85□□□□□ -0.67
TM9SF3-206ENST00000490192 RBM25P49756 843 aaKnown RBP10.84□□□□□ -0.67
TM9SF3-206ENST00000490192 KCNA1Q09470 495 aa10.84□□□□□ -0.67
TM9SF3-206ENST00000490192 USB1Q9BQ65 265 aaKnown RBP10.84□□□□□ -0.67
TM9SF3-206ENST00000490192 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
TM9SF3-206ENST00000490192 BRD1O95696 1058 aa10.83□□□□□ -0.68
TM9SF3-206ENST00000490192 CSB-PGBD3P0DP91 1061 aa10.83□□□□□ -0.68
TM9SF3-206ENST00000490192 MSS51Q4VC12 460 aa10.83□□□□□ -0.68
TM9SF3-206ENST00000490192 CFAP70Q5T0N1 1121 aa10.83□□□□□ -0.68
TM9SF3-206ENST00000490192 PRPF38BQ5VTL8 546 aaKnown RBP10.83□□□□□ -0.68
TM9SF3-206ENST00000490192 SPRYD7Q5W111 196 aa10.83□□□□□ -0.68
TM9SF3-206ENST00000490192 ZNF428Q96B54 188 aa10.83□□□□□ -0.68
TM9SF3-206ENST00000490192 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
TM9SF3-206ENST00000490192 ZBTB24O43167 697 aaPredicted RBP10.82□□□□□ -0.68
TM9SF3-206ENST00000490192 WASHC4Q2M389 1173 aa10.82□□□□□ -0.68
TM9SF3-206ENST00000490192 ZNF598Q86UK7 904 aaKnown RBP10.82□□□□□ -0.68
TM9SF3-206ENST00000490192 FCF1Q9Y324 198 aaKnown RBP10.82□□□□□ -0.68
TM9SF3-206ENST00000490192 LIAT1Q6ZQX7 453 aa10.81□□□□□ -0.68
TM9SF3-206ENST00000490192 NRG2O14511 850 aaPredicted RBP10.8□□□□□ -0.68
TM9SF3-206ENST00000490192 CD2BP2O95400 341 aaKnown RBP10.8□□□□□ -0.68
TM9SF3-206ENST00000490192 SRPK2P78362 688 aaKnown RBP10.8□□□□□ -0.68
TM9SF3-206ENST00000490192 HLA-CQ95604 372 aa10.8□□□□□ -0.68
TM9SF3-206ENST00000490192 ZBTB3Q9H5J0 574 aa10.8□□□□□ -0.68
TM9SF3-206ENST00000490192 FDX1P10109 184 aa10.79□□□□□ -0.68
TM9SF3-206ENST00000490192 ZNF697Q5TEC3 545 aa10.79□□□□□ -0.68
TM9SF3-206ENST00000490192 PPP1R12CQ9BZL4 782 aa10.79□□□□□ -0.68
TM9SF3-206ENST00000490192 PRDM9Q9NQV7 894 aa10.79□□□□□ -0.68
TM9SF3-206ENST00000490192 CARNS1A5YM72 827 aa10.78□□□□□ -0.68
TM9SF3-206ENST00000490192 GUCA2AQ02747 115 aa10.78□□□□□ -0.68
TM9SF3-206ENST00000490192 VAC14Q08AM6 782 aa10.78□□□□□ -0.68
TM9SF3-206ENST00000490192 HMX1Q9NP08 348 aaPredicted RBP10.78□□□□□ -0.68
TM9SF3-206ENST00000490192 C6orf229H3BNL8 230 aa10.77□□□□□ -0.69
TM9SF3-206ENST00000490192 RPIAP49247 311 aa10.77□□□□□ -0.69
TM9SF3-206ENST00000490192 PLA2G2CQ5R387 149 aa10.77□□□□□ -0.69
TM9SF3-206ENST00000490192 EMID1Q96A84 441 aaPredicted RBP10.77□□□□□ -0.69
TM9SF3-206ENST00000490192 GPR37L1O60883 481 aa10.76□□□□□ -0.69
TM9SF3-206ENST00000490192 CTDSPL2Q05D32 466 aa10.76□□□□□ -0.69
TM9SF3-206ENST00000490192 TRIM34Q9BYJ4 488 aa10.76□□□□□ -0.69
TM9SF3-206ENST00000490192 MMP16P51512 607 aa10.75□□□□□ -0.69
TM9SF3-206ENST00000490192 PALM3A6NDB9 673 aaPredicted RBP10.74□□□□□ -0.69
TM9SF3-206ENST00000490192 LMOD1P29536 600 aaPredicted RBP10.74□□□□□ -0.69
TM9SF3-206ENST00000490192 RETREG3Q86VR2 466 aa10.74□□□□□ -0.69
TM9SF3-206ENST00000490192 CCDC24Q8N4L8 307 aa10.74□□□□□ -0.69
TM9SF3-206ENST00000490192 SYMPKQ92797 1274 aaKnown RBP10.74□□□□□ -0.69
TM9SF3-206ENST00000490192 ALG2Q9H553 416 aa10.74□□□□□ -0.69
TM9SF3-206ENST00000490192 DXOO77932 396 aaKnown RBP10.72□□□□□ -0.69
TM9SF3-206ENST00000490192 PCDHGC3Q9UN70 934 aa10.72□□□□□ -0.69
TM9SF3-206ENST00000490192 IVNS1ABPQ9Y6Y0 642 aa10.72□□□□□ -0.69
TM9SF3-206ENST00000490192 PRR20EP86478 221 aa10.71□□□□□ -0.69
TM9SF3-206ENST00000490192 PRR20CP86479 221 aa10.71□□□□□ -0.69
TM9SF3-206ENST00000490192 PRR20DP86480 221 aa10.71□□□□□ -0.69
TM9SF3-206ENST00000490192 PRR20BP86481 221 aa10.71□□□□□ -0.69
TM9SF3-206ENST00000490192 PRR20AP86496 221 aa10.71□□□□□ -0.69
TM9SF3-206ENST00000490192 FOXC1Q12948 553 aa10.71□□□□□ -0.69
TM9SF3-206ENST00000490192 TRAF7Q6Q0C0 670 aa10.71□□□□□ -0.69
TM9SF3-206ENST00000490192 LRRN4Q8WUT4 740 aa10.71□□□□□ -0.69
TM9SF3-206ENST00000490192 TSC1Q92574 1164 aa10.71□□□□□ -0.69
TM9SF3-206ENST00000490192 TNFRSF10AO00220 468 aa10.7□□□□□ -0.7
TM9SF3-206ENST00000490192 JUNDP17535 347 aa10.7□□□□□ -0.7
TM9SF3-206ENST00000490192 HELBQ8NG08 1087 aaPredicted RBP10.7□□□□□ -0.7
TM9SF3-206ENST00000490192 TFIP11Q9UBB9 837 aaKnown RBP10.7□□□□□ -0.7
TM9SF3-206ENST00000490192 E9PSI1 815 aa10.69□□□□□ -0.7
TM9SF3-206ENST00000490192 MTMR2Q13614 643 aa10.69□□□□□ -0.7
TM9SF3-206ENST00000490192 CCDC27Q2M243 656 aa10.69□□□□□ -0.7
TM9SF3-206ENST00000490192 CDCA8Q53HL2 280 aa10.69□□□□□ -0.7
TM9SF3-206ENST00000490192 UCN2Q96RP3 112 aa10.69□□□□□ -0.7
TM9SF3-206ENST00000490192 VRTNQ9H8Y1 702 aa10.69□□□□□ -0.7
TM9SF3-206ENST00000490192 PKDCCQ504Y2 493 aa10.68□□□□□ -0.7
TM9SF3-206ENST00000490192 TRIM67Q6ZTA4 783 aa10.68□□□□□ -0.7
TM9SF3-206ENST00000490192 PRR7Q8TB68 274 aa10.68□□□□□ -0.7
TM9SF3-206ENST00000490192 GDF9O60383 454 aa10.67□□□□□ -0.7
TM9SF3-206ENST00000490192 ATG7O95352 703 aa10.67□□□□□ -0.7
TM9SF3-206ENST00000490192 EPS8L1Q8TE68 723 aa10.67□□□□□ -0.7
TM9SF3-206ENST00000490192 TMEM88BA6NKF7 163 aa10.66□□□□□ -0.7
TM9SF3-206ENST00000490192 SND1Q7KZF4 910 aaKnown RBP eCLIP10.66□□□□□ -0.71e-6■■□□□ 12.8
TM9SF3-206ENST00000490192 NUDT12Q9BQG2 462 aa10.66□□□□□ -0.7
TM9SF3-206ENST00000490192 CFAP99D6REC4 459 aa10.65□□□□□ -0.7
TM9SF3-206ENST00000490192 SOX11P35716 441 aa10.65□□□□□ -0.7
TM9SF3-206ENST00000490192 TRIM32Q13049 653 aa10.65□□□□□ -0.7
TM9SF3-206ENST00000490192 DGAT1O75907 488 aa10.64□□□□□ -0.71
TM9SF3-206ENST00000490192 CYP4X1Q8N118 509 aa10.64□□□□□ -0.71
TM9SF3-206ENST00000490192 MAFBQ9Y5Q3 323 aaPredicted RBP10.64□□□□□ -0.71
TM9SF3-206ENST00000490192 FAM187AA6NFU0 413 aa10.63□□□□□ -0.71
TM9SF3-206ENST00000490192 SEMA3FQ13275 785 aa10.63□□□□□ -0.71
TM9SF3-206ENST00000490192 PKD2L1Q9P0L9 805 aa10.63□□□□□ -0.71
TM9SF3-206ENST00000490192 AMOTL2Q9Y2J4 779 aa10.63□□□□□ -0.71
TM9SF3-206ENST00000490192 IGSF3O75054 1194 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms