RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 LAMC1P11047 1609 aa13.8□□□□□ -0.2
ABCD4-214ENST00000489678 RGPD8O14715 1765 aaPredicted RBP13.8□□□□□ -0.2
ABCD4-214ENST00000489678 SETD1AO15047 1707 aaKnown RBP13.79□□□□□ -0.2
ABCD4-214ENST00000489678 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
ABCD4-214ENST00000489678 PPP2R1AP30153 589 aa13.79□□□□□ -0.2
ABCD4-214ENST00000489678 STRCP1A6NGW2 1772 aa13.78□□□□□ -0.2
ABCD4-214ENST00000489678 NKTRP30414 1462 aaKnown RBP13.78□□□□□ -0.2
ABCD4-214ENST00000489678 KRT28Q7Z3Y7 464 aa13.78□□□□□ -0.2
ABCD4-214ENST00000489678 PNISRQ8TF01 805 aaKnown RBP13.78□□□□□ -0.2
ABCD4-214ENST00000489678 BRINP3Q76B58 766 aa13.78□□□□□ -0.2
ABCD4-214ENST00000489678 CGNL1Q0VF96 1302 aa13.77□□□□□ -0.21
ABCD4-214ENST00000489678 MSH6P52701 1360 aa13.77□□□□□ -0.21
ABCD4-214ENST00000489678 HSP90AB2PQ58FF8 381 aa13.76□□□□□ -0.21
ABCD4-214ENST00000489678 TTC21BQ7Z4L5 1316 aa13.76□□□□□ -0.21
ABCD4-214ENST00000489678 COG3Q96JB2 828 aa13.75□□□□□ -0.21
ABCD4-214ENST00000489678 ATP7BP35670 1465 aa13.75□□□□□ -0.21
ABCD4-214ENST00000489678 ADAMTS8Q9UP79 889 aa13.75□□□□□ -0.21
ABCD4-214ENST00000489678 CPS1P31327 1500 aa13.75□□□□□ -0.21
ABCD4-214ENST00000489678 ZNF142P52746 1687 aaPredicted RBP13.74□□□□□ -0.21
ABCD4-214ENST00000489678 ATAD2Q6PL18 1390 aa13.74□□□□□ -0.21
ABCD4-214ENST00000489678 MYBBP1AQ9BQG0 1328 aaKnown RBP13.74□□□□□ -0.21
ABCD4-214ENST00000489678 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
ABCD4-214ENST00000489678 U2AF1L5P0DN76 240 aaPredicted RBP13.73□□□□□ -0.21
ABCD4-214ENST00000489678 U2AF1Q01081 240 aaKnown RBP eCLIP13.73□□□□□ -0.21
ABCD4-214ENST00000489678 CD163L1Q9NR16 1453 aa13.73□□□□□ -0.21
ABCD4-214ENST00000489678 DIP2AQ14689 1571 aa13.73□□□□□ -0.21
ABCD4-214ENST00000489678 RALBP1Q15311 655 aa13.73□□□□□ -0.21
ABCD4-214ENST00000489678 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
ABCD4-214ENST00000489678 ANKRD36BQ8N2N9 1353 aa13.73□□□□□ -0.21
ABCD4-214ENST00000489678 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
ABCD4-214ENST00000489678 LRRC59Q96AG4 307 aaKnown RBP13.72□□□□□ -0.21
ABCD4-214ENST00000489678 PARD3Q8TEW0 1356 aa13.72□□□□□ -0.21
ABCD4-214ENST00000489678 KDM5AP29375 1690 aaKnown RBP13.72□□□□□ -0.21
ABCD4-214ENST00000489678 BRD4O60885 1362 aaPredicted RBP13.72□□□□□ -0.21
ABCD4-214ENST00000489678 AEBP1Q8IUX7 1158 aa13.72□□□□□ -0.21
ABCD4-214ENST00000489678 STRN4Q9NRL3 753 aa13.72□□□□□ -0.21
ABCD4-214ENST00000489678 FAM135BQ49AJ0 1406 aa13.71□□□□□ -0.21
ABCD4-214ENST00000489678 ADGRL3Q9HAR2 1447 aa13.71□□□□□ -0.21
ABCD4-214ENST00000489678 A0A0G2JS52 829 aa13.71□□□□□ -0.21
ABCD4-214ENST00000489678 LRRC7Q96NW7 1537 aa13.71□□□□□ -0.22
ABCD4-214ENST00000489678 NALCNQ8IZF0 1738 aa13.71□□□□□ -0.22
ABCD4-214ENST00000489678 KIAA1210Q9ULL0 1709 aa13.71□□□□□ -0.22
ABCD4-214ENST00000489678 AMPHP49418 695 aa13.71□□□□□ -0.22
ABCD4-214ENST00000489678 SMG6Q86US8 1419 aaKnown RBP13.7□□□□□ -0.22
ABCD4-214ENST00000489678 TECPR2O15040 1411 aa13.7□□□□□ -0.22
ABCD4-214ENST00000489678 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
ABCD4-214ENST00000489678 WDR43Q15061 677 aaKnown RBP eCLIP13.69□□□□□ -0.22
ABCD4-214ENST00000489678 CHD2O14647 1828 aaKnown RBP13.69□□□□□ -0.22
ABCD4-214ENST00000489678 MYOM1P52179 1685 aa13.69□□□□□ -0.22
ABCD4-214ENST00000489678 PTCH1Q13635 1447 aa13.69□□□□□ -0.22
ABCD4-214ENST00000489678 C1orf167Q5SNV9 1468 aa13.68□□□□□ -0.22
ABCD4-214ENST00000489678 THUMPD2Q9BTF0 503 aaKnown RBP13.68□□□□□ -0.22
ABCD4-214ENST00000489678 AXIN2Q9Y2T1 843 aa13.68□□□□□ -0.22
ABCD4-214ENST00000489678 NLRP13Q86W25 1043 aa13.68□□□□□ -0.22
ABCD4-214ENST00000489678 PLEKHG3A1L390 1219 aa13.66□□□□□ -0.22
ABCD4-214ENST00000489678 NUDCQ9Y266 331 aa13.66□□□□□ -0.22
ABCD4-214ENST00000489678 MAP3K19Q56UN5 1328 aa13.66□□□□□ -0.22
ABCD4-214ENST00000489678 APAF1O14727 1248 aa13.66□□□□□ -0.22
ABCD4-214ENST00000489678 ERICH6BQ5W0A0 696 aa13.66□□□□□ -0.22
ABCD4-214ENST00000489678 CDCA7LQ96GN5 454 aa13.66□□□□□ -0.22
ABCD4-214ENST00000489678 GCP02774 474 aa13.65□□□□□ -0.22
ABCD4-214ENST00000489678 DCTN1Q14203 1278 aa13.65□□□□□ -0.22
ABCD4-214ENST00000489678 USP6P35125 1406 aa13.65□□□□□ -0.22
ABCD4-214ENST00000489678 XRN1Q8IZH2 1706 aaKnown RBP13.65□□□□□ -0.22
ABCD4-214ENST00000489678 MST1RQ04912 1400 aa13.65□□□□□ -0.22
ABCD4-214ENST00000489678 PIK3R4Q99570 1358 aa13.65□□□□□ -0.22
ABCD4-214ENST00000489678 CSB-PGBD3P0DP91 1061 aa13.65□□□□□ -0.22
ABCD4-214ENST00000489678 USP32Q8NFA0 1604 aa13.64□□□□□ -0.23
ABCD4-214ENST00000489678 SIRT1Q96EB6 747 aa13.64□□□□□ -0.23
ABCD4-214ENST00000489678 PPP4R2Q9NY27 417 aa13.64□□□□□ -0.23
ABCD4-214ENST00000489678 LAS1LQ9Y4W2 734 aaKnown RBP13.64□□□□□ -0.23
ABCD4-214ENST00000489678 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
ABCD4-214ENST00000489678 CCDC9Q9Y3X0 531 aaKnown RBP13.64□□□□□ -0.23
ABCD4-214ENST00000489678 DLC1Q96QB1 1528 aa13.63□□□□□ -0.23
ABCD4-214ENST00000489678 HSPA1LP34931 641 aa13.63□□□□□ -0.23
ABCD4-214ENST00000489678 CERKQ8TCT0 537 aa13.63□□□□□ -0.23
ABCD4-214ENST00000489678 RNF123Q5XPI4 1314 aa13.62□□□□□ -0.23
ABCD4-214ENST00000489678 FAM83GA6ND36 823 aa13.62□□□□□ -0.23
ABCD4-214ENST00000489678 SULT6B1Q6IMI4 303 aa13.62□□□□□ -0.23
ABCD4-214ENST00000489678 ZNF428Q96B54 188 aa13.62□□□□□ -0.23
ABCD4-214ENST00000489678 PRDM11Q9NQV5 511 aa13.62□□□□□ -0.23
ABCD4-214ENST00000489678 RBM19Q9Y4C8 960 aaKnown RBP13.62□□□□□ -0.23
ABCD4-214ENST00000489678 FAM182BQ5T319 152 aa13.61□□□□□ -0.23
ABCD4-214ENST00000489678 B4GALNT3Q6L9W6 998 aa13.61□□□□□ -0.23
ABCD4-214ENST00000489678 PHACTR3Q96KR7 559 aa13.61□□□□□ -0.23
ABCD4-214ENST00000489678 NLRP2Q9NX02 1062 aa13.61□□□□□ -0.23
ABCD4-214ENST00000489678 CPSF1Q10570 1443 aaKnown RBP13.61□□□□□ -0.23
ABCD4-214ENST00000489678 C8orf37Q96NL8 207 aa13.61□□□□□ -0.23
ABCD4-214ENST00000489678 KAT6BQ8WYB5 2073 aa13.6□□□□□ -0.23
ABCD4-214ENST00000489678 NPHP3Q7Z494 1330 aa13.6□□□□□ -0.23
ABCD4-214ENST00000489678 TCERG1O14776 1098 aaKnown RBP13.6□□□□□ -0.23
ABCD4-214ENST00000489678 TOM1O60784 492 aa13.6□□□□□ -0.23
ABCD4-214ENST00000489678 EIF4A2Q14240 407 aaKnown RBP13.6□□□□□ -0.23
ABCD4-214ENST00000489678 DIAPH1O60610 1272 aaKnown RBP13.59□□□□□ -0.23
ABCD4-214ENST00000489678 PRKAR2BP31323 418 aa13.59□□□□□ -0.23
ABCD4-214ENST00000489678 MIS18AQ9NYP9 233 aa13.59□□□□□ -0.23
ABCD4-214ENST00000489678 ELL2O00472 640 aaPredicted RBP13.58□□□□□ -0.23
ABCD4-214ENST00000489678 KIAA0232Q92628 1395 aa13.58□□□□□ -0.24
ABCD4-214ENST00000489678 EDC4Q6P2E9 1401 aaKnown RBP13.58□□□□□ -0.24
ABCD4-214ENST00000489678 NBPF6Q5VWK0 638 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms