RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 Q3C1V9 767 aa6.91□□□□□ -1.3
PRPF4-203ENST00000488937 KLF16Q9BXK1 252 aaPredicted RBP6.91□□□□□ -1.3
PRPF4-203ENST00000488937 ADAMTS2O95450 1211 aa6.9□□□□□ -1.3
PRPF4-203ENST00000488937 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.9□□□□□ -1.3
PRPF4-203ENST00000488937 PLEKHG3A1L390 1219 aa6.89□□□□□ -1.31
PRPF4-203ENST00000488937 C6orf118Q5T5N4 469 aa6.89□□□□□ -1.31
PRPF4-203ENST00000488937 PODNQ7Z5L7 613 aa6.89□□□□□ -1.31
PRPF4-203ENST00000488937 MPNDQ8N594 471 aa6.89□□□□□ -1.31
PRPF4-203ENST00000488937 RDH13Q8NBN7 331 aa6.89□□□□□ -1.31
PRPF4-203ENST00000488937 PXYLP1Q8TE99 480 aa6.89□□□□□ -1.31
PRPF4-203ENST00000488937 DNMT3LQ9UJW3 386 aa6.89□□□□□ -1.31
PRPF4-203ENST00000488937 SOS2Q07890 1332 aaPredicted RBP6.88□□□□□ -1.31
PRPF4-203ENST00000488937 CELA2BP08218 269 aaPredicted RBP6.88□□□□□ -1.31
PRPF4-203ENST00000488937 GCGRP47871 477 aa6.88□□□□□ -1.31
PRPF4-203ENST00000488937 OATP04181 439 aa6.87□□□□□ -1.31
PRPF4-203ENST00000488937 GRIPAP1Q4V328 841 aa6.87□□□□□ -1.31
PRPF4-203ENST00000488937 USB1Q9BQ65 265 aaKnown RBP6.87□□□□□ -1.31
PRPF4-203ENST00000488937 KRTAP4-9Q9BYQ8 210 aa6.87□□□□□ -1.31
PRPF4-203ENST00000488937 PTSQ03393 145 aa6.86□□□□□ -1.31
PRPF4-203ENST00000488937 SRSF11Q05519 484 aaKnown RBP6.86□□□□□ -1.31
PRPF4-203ENST00000488937 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.86□□□□□ -1.31
PRPF4-203ENST00000488937 ZMYM1Q5SVZ6 1142 aa6.86□□□□□ -1.31
PRPF4-203ENST00000488937 TLL2Q9Y6L7 1015 aa6.86□□□□□ -1.31
PRPF4-203ENST00000488937 BMP2P12643 396 aa6.85□□□□□ -1.31
PRPF4-203ENST00000488937 KRTAP4-2Q9BYR5 136 aa6.85□□□□□ -1.31
PRPF4-203ENST00000488937 UPP2O95045 317 aa6.84□□□□□ -1.31
PRPF4-203ENST00000488937 ITGB7P26010 798 aa6.84□□□□□ -1.31
PRPF4-203ENST00000488937 SH3BP2P78314 561 aa6.84□□□□□ -1.31
PRPF4-203ENST00000488937 PAXIP1Q6ZW49 1069 aaPredicted RBP6.84□□□□□ -1.31
PRPF4-203ENST00000488937 KRBA1A5PL33 1030 aa6.82□□□□□ -1.32
PRPF4-203ENST00000488937 SV2AQ7L0J3 742 aa6.82□□□□□ -1.32
PRPF4-203ENST00000488937 LINC00528Q8N1L1 170 aa6.82□□□□□ -1.32
PRPF4-203ENST00000488937 CCDC155Q8N6L0 562 aa6.82□□□□□ -1.32
PRPF4-203ENST00000488937 DAXXQ9UER7 740 aaPredicted RBP6.82□□□□□ -1.32
PRPF4-203ENST00000488937 FCHSD2O94868 740 aa6.81□□□□□ -1.32
PRPF4-203ENST00000488937 VWA5B2Q8N398 1253 aa6.81□□□□□ -1.32
PRPF4-203ENST00000488937 ARHGEF1Q92888 912 aaKnown RBP6.81□□□□□ -1.32
PRPF4-203ENST00000488937 CFAP44Q96MT7 982 aa6.81□□□□□ -1.32
PRPF4-203ENST00000488937 NUTM2FA1L443 756 aa6.8□□□□□ -1.32
PRPF4-203ENST00000488937 DDX11L8A8MPP1 907 aa6.8□□□□□ -1.32
PRPF4-203ENST00000488937 ZIC2O95409 532 aaPredicted RBP6.8□□□□□ -1.32
PRPF4-203ENST00000488937 PTCRAQ6ISU1 281 aaPredicted RBP6.8□□□□□ -1.32
PRPF4-203ENST00000488937 ALYREFQ86V81 257 aaKnown RBP6.8□□□□□ -1.32
PRPF4-203ENST00000488937 COBLO75128 1261 aa6.79□□□□□ -1.32
PRPF4-203ENST00000488937 ITGA6P23229 1130 aa6.79□□□□□ -1.32
PRPF4-203ENST00000488937 HAP1P54257 671 aaPredicted RBP6.79□□□□□ -1.32
PRPF4-203ENST00000488937 METTL3Q86U44 580 aaKnown RBP6.79□□□□□ -1.32
PRPF4-203ENST00000488937 VSIG10Q8N0Z9 540 aa6.79□□□□□ -1.32
PRPF4-203ENST00000488937 ZFAND3Q9H8U3 227 aa6.79□□□□□ -1.32
PRPF4-203ENST00000488937 VARSP26640 1264 aaKnown RBP6.78□□□□□ -1.32
PRPF4-203ENST00000488937 ITPKCQ96DU7 683 aa6.78□□□□□ -1.32
PRPF4-203ENST00000488937 CDC14CA4D256 554 aa6.77□□□□□ -1.33
PRPF4-203ENST00000488937 ARID1BQ8NFD5 2236 aaPredicted RBP6.77□□□□□ -1.33
PRPF4-203ENST00000488937 SLC35F4A4IF30 521 aa6.76□□□□□ -1.33
PRPF4-203ENST00000488937 MLLT3P42568 568 aaPredicted RBP6.76□□□□□ -1.33
PRPF4-203ENST00000488937 SH3RF1Q7Z6J0 888 aa6.76□□□□□ -1.33
PRPF4-203ENST00000488937 SULF1Q8IWU6 871 aa6.76□□□□□ -1.33
PRPF4-203ENST00000488937 MEIOBQ8N635 442 aa6.76□□□□□ -1.33
PRPF4-203ENST00000488937 NEDD1Q8NHV4 660 aa6.76□□□□□ -1.33
PRPF4-203ENST00000488937 SCO2A0A1W2PP80 73 aa6.75□□□□□ -1.33
PRPF4-203ENST00000488937 TTLL8A6PVC2 850 aa6.75□□□□□ -1.33
PRPF4-203ENST00000488937 JUNDP17535 347 aa6.75□□□□□ -1.33
PRPF4-203ENST00000488937 NUDT12Q9BQG2 462 aa6.75□□□□□ -1.33
PRPF4-203ENST00000488937 TPRNQ4KMQ1 711 aa6.74□□□□□ -1.33
PRPF4-203ENST00000488937 SEMA6BQ9H3T3 888 aa6.74□□□□□ -1.33
PRPF4-203ENST00000488937 ZFP64Q9NPA5 681 aa6.74□□□□□ -1.33
PRPF4-203ENST00000488937 HIC1Q14526 733 aa6.73□□□□□ -1.33
PRPF4-203ENST00000488937 BCRP11274 1271 aa6.72□□□□□ -1.33
PRPF4-203ENST00000488937 ARTNQ5T4W7 220 aa6.72□□□□□ -1.33
PRPF4-203ENST00000488937 TSHZ2Q9NRE2 1034 aa6.72□□□□□ -1.33
PRPF4-203ENST00000488937 LRRC4BQ9NT99 713 aa6.72□□□□□ -1.33
PRPF4-203ENST00000488937 NBPF11Q86T75 865 aa6.71□□□□□ -1.34
PRPF4-203ENST00000488937 TSEN34Q9BSV6 310 aaKnown RBP6.71□□□□□ -1.34
PRPF4-203ENST00000488937 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
PRPF4-203ENST00000488937 SPTLC1O15269 473 aa6.7□□□□□ -1.34
PRPF4-203ENST00000488937 GAS6Q14393 721 aa6.7□□□□□ -1.34
PRPF4-203ENST00000488937 CDK15Q96Q40 435 aa6.7□□□□□ -1.34
PRPF4-203ENST00000488937 ARXQ96QS3 562 aa6.7□□□□□ -1.34
PRPF4-203ENST00000488937 NR5A1Q13285 461 aa6.69□□□□□ -1.34
PRPF4-203ENST00000488937 TIMELESSQ9UNS1 1208 aa6.69□□□□□ -1.34
PRPF4-203ENST00000488937 FIGNL2A6NMB9 653 aa6.68□□□□□ -1.34
PRPF4-203ENST00000488937 FOXD4L6Q3SYB3 417 aaPredicted RBP6.68□□□□□ -1.34
PRPF4-203ENST00000488937 FOXD4L3Q6VB84 417 aaPredicted RBP6.68□□□□□ -1.34
PRPF4-203ENST00000488937 NR3C2P08235 984 aa6.67□□□□□ -1.34
PRPF4-203ENST00000488937 YBX3P16989 372 aaKnown RBP eCLIP6.67□□□□□ -1.34
PRPF4-203ENST00000488937 COL8A1P27658 744 aa6.67□□□□□ -1.34
PRPF4-203ENST00000488937 LINC01559Q495D7 138 aa6.67□□□□□ -1.34
PRPF4-203ENST00000488937 P3H3Q8IVL6 736 aa6.67□□□□□ -1.34
PRPF4-203ENST00000488937 ZNF511Q8NB15 262 aa6.67□□□□□ -1.34
PRPF4-203ENST00000488937 FAM174AQ8TBP5 190 aa6.67□□□□□ -1.34
PRPF4-203ENST00000488937 BAP1Q92560 729 aa6.67□□□□□ -1.34
PRPF4-203ENST00000488937 KCNV2Q8TDN2 545 aa6.66□□□□□ -1.34
PRPF4-203ENST00000488937 UNC93B1Q9H1C4 597 aa6.66□□□□□ -1.34
PRPF4-203ENST00000488937 MBIPQ9NS73 344 aa6.65□□□□□ -1.34
PRPF4-203ENST00000488937 KDM2AQ9Y2K7 1162 aa6.65□□□□□ -1.34
PRPF4-203ENST00000488937 C1QTNF9BB2RNN3 333 aa6.64□□□□□ -1.35
PRPF4-203ENST00000488937 GNPATO15228 680 aa6.64□□□□□ -1.35
PRPF4-203ENST00000488937 CCNYL3P0C7X3 344 aa6.64□□□□□ -1.35
PRPF4-203ENST00000488937 SMYD5Q6GMV2 418 aa6.64□□□□□ -1.35
PRPF4-203ENST00000488937 IGF1RP08069 1367 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms