RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 CABP1Q9NZU7 370 aa20.19■□□□□ 0.82
COL9A2-208ENST00000488463 ATRNO75882 1429 aa20.19■□□□□ 0.82
COL9A2-208ENST00000488463 SSH2Q76I76 1423 aa20.19■□□□□ 0.82
COL9A2-208ENST00000488463 TESK2Q96S53 571 aa20.18■□□□□ 0.82
COL9A2-208ENST00000488463 QTRT2Q9H974 415 aaKnown RBP20.18■□□□□ 0.82
COL9A2-208ENST00000488463 CDK12Q9NYV4 1490 aaPredicted RBP20.18■□□□□ 0.82
COL9A2-208ENST00000488463 AKAP12Q02952 1782 aa20.17■□□□□ 0.82
COL9A2-208ENST00000488463 USP21Q9UK80 565 aa20.17■□□□□ 0.82
COL9A2-208ENST00000488463 PHRF1Q9P1Y6 1649 aaKnown RBP20.16■□□□□ 0.82
COL9A2-208ENST00000488463 PLCH1Q4KWH8 1693 aa20.16■□□□□ 0.82
COL9A2-208ENST00000488463 RXRBP28702 533 aa20.16■□□□□ 0.82
COL9A2-208ENST00000488463 UPF1Q92900 1129 aaKnown RBP eCLIP20.16■□□□□ 0.82
COL9A2-208ENST00000488463 USP6P35125 1406 aa20.16■□□□□ 0.82
COL9A2-208ENST00000488463 PAK3O75914 559 aaPredicted RBP20.15■□□□□ 0.82
COL9A2-208ENST00000488463 NWD2Q9ULI1 1742 aa20.15■□□□□ 0.82
COL9A2-208ENST00000488463 CPSF1Q10570 1443 aaKnown RBP20.14■□□□□ 0.81
COL9A2-208ENST00000488463 BRD4O60885 1362 aaPredicted RBP20.14■□□□□ 0.81
COL9A2-208ENST00000488463 ATAD2Q6PL18 1390 aa20.14■□□□□ 0.81
COL9A2-208ENST00000488463 ST20-MTHFSA0A0A6YYL1 179 aa20.14■□□□□ 0.81
COL9A2-208ENST00000488463 RBM6P78332 1123 aaKnown RBP20.14■□□□□ 0.81
COL9A2-208ENST00000488463 CCER1Q8TC90 406 aaPredicted RBP20.14■□□□□ 0.81
COL9A2-208ENST00000488463 PLEKHG5O94827 1062 aa20.13■□□□□ 0.81
COL9A2-208ENST00000488463 NRKQ7Z2Y5 1582 aa20.12■□□□□ 0.81
COL9A2-208ENST00000488463 CD163L1Q9NR16 1453 aa20.12■□□□□ 0.81
COL9A2-208ENST00000488463 RGS12O14924 1447 aa20.12■□□□□ 0.81
COL9A2-208ENST00000488463 FAM83GA6ND36 823 aa20.12■□□□□ 0.81
COL9A2-208ENST00000488463 TRPC5Q9UL62 973 aaPredicted RBP20.12■□□□□ 0.81
COL9A2-208ENST00000488463 NRAPQ86VF7 1730 aa20.12■□□□□ 0.81
COL9A2-208ENST00000488463 USP47Q96K76 1375 aa20.11■□□□□ 0.81
COL9A2-208ENST00000488463 USP19O94966 1318 aa20.11■□□□□ 0.81
COL9A2-208ENST00000488463 PIK3C2AO00443 1686 aa20.11■□□□□ 0.81
COL9A2-208ENST00000488463 UNC5CLQ8IV45 518 aa20.11■□□□□ 0.81
COL9A2-208ENST00000488463 COL14A1Q05707 1796 aaKnown RBP20.11■□□□□ 0.81
COL9A2-208ENST00000488463 MON2Q7Z3U7 1717 aa20.1■□□□□ 0.81
COL9A2-208ENST00000488463 EP400Q96L91 3159 aa20.1■□□□□ 0.81
COL9A2-208ENST00000488463 HAP1P54257 671 aaPredicted RBP20.1■□□□□ 0.81
COL9A2-208ENST00000488463 NUTM2GQ5VZR2 741 aa20.1■□□□□ 0.81
COL9A2-208ENST00000488463 PUS7Q96PZ0 661 aaKnown RBP20.1■□□□□ 0.81
COL9A2-208ENST00000488463 GLI3P10071 1580 aa20.09■□□□□ 0.81
COL9A2-208ENST00000488463 ABTB2Q8N961 1025 aa20.08■□□□□ 0.81
COL9A2-208ENST00000488463 ZNF692Q9BU19 519 aaPredicted RBP20.07■□□□□ 0.8
COL9A2-208ENST00000488463 SLIT3O75094 1523 aa20.06■□□□□ 0.8
COL9A2-208ENST00000488463 KIAA0232Q92628 1395 aa20.06■□□□□ 0.8
COL9A2-208ENST00000488463 TTC21BQ7Z4L5 1316 aa20.05■□□□□ 0.8
COL9A2-208ENST00000488463 GJD4Q96KN9 370 aaPredicted RBP20.05■□□□□ 0.8
COL9A2-208ENST00000488463 VPS72Q15906 364 aa20.04■□□□□ 0.8
COL9A2-208ENST00000488463 SLC12A5Q9H2X9 1139 aa20.04■□□□□ 0.8
COL9A2-208ENST00000488463 LMO7Q8WWI1 1683 aa20.03■□□□□ 0.8
COL9A2-208ENST00000488463 CPDO75976 1380 aa20.03■□□□□ 0.8
COL9A2-208ENST00000488463 KTN1Q86UP2 1357 aaKnown RBP20.03■□□□□ 0.8
COL9A2-208ENST00000488463 NLRP13Q86W25 1043 aa20.02■□□□□ 0.8
COL9A2-208ENST00000488463 BTG4Q9NY30 223 aa20.02■□□□□ 0.8
COL9A2-208ENST00000488463 USP54Q70EL1 1684 aa20.02■□□□□ 0.8
COL9A2-208ENST00000488463 GCP02774 474 aa20.01■□□□□ 0.79
COL9A2-208ENST00000488463 ZC3H6P61129 1189 aaKnown RBP20.01■□□□□ 0.79
COL9A2-208ENST00000488463 PRDM11Q9NQV5 511 aa20.01■□□□□ 0.79
COL9A2-208ENST00000488463 TTC21AQ8NDW8 1320 aa20.01■□□□□ 0.79
COL9A2-208ENST00000488463 A0A1W2PP64 1363 aa20■□□□□ 0.79
COL9A2-208ENST00000488463 SLC24A1O60721 1099 aa20■□□□□ 0.79
COL9A2-208ENST00000488463 CHRNA2Q15822 529 aa20■□□□□ 0.79
COL9A2-208ENST00000488463 NLRP6P59044 892 aa19.99■□□□□ 0.79
COL9A2-208ENST00000488463 CAMTA1Q9Y6Y1 1673 aa19.99■□□□□ 0.79
COL9A2-208ENST00000488463 COL18A1P39060 1754 aa19.98■□□□□ 0.79
COL9A2-208ENST00000488463 NINLQ9Y2I6 1382 aa19.98■□□□□ 0.79
COL9A2-208ENST00000488463 ONECUT3O60422 494 aaPredicted RBP19.98■□□□□ 0.79
COL9A2-208ENST00000488463 TMC1Q8TDI8 760 aa19.98■□□□□ 0.79
COL9A2-208ENST00000488463 BRWD3Q6RI45 1802 aa19.97■□□□□ 0.79
COL9A2-208ENST00000488463 USP31Q70CQ4 1352 aa19.97■□□□□ 0.79
COL9A2-208ENST00000488463 EDC4Q6P2E9 1401 aaKnown RBP19.97■□□□□ 0.79
COL9A2-208ENST00000488463 NFAT5O94916 1531 aa19.97■□□□□ 0.79
COL9A2-208ENST00000488463 TMF1P82094 1093 aa19.96■□□□□ 0.79
COL9A2-208ENST00000488463 MYOM1P52179 1685 aa19.96■□□□□ 0.79
COL9A2-208ENST00000488463 ZRANB1Q9UGI0 708 aa19.95■□□□□ 0.78
COL9A2-208ENST00000488463 SPATA31A5Q5VU36 1347 aa19.95■□□□□ 0.78
COL9A2-208ENST00000488463 SPATA31A7Q8IWB4 1347 aa19.95■□□□□ 0.78
COL9A2-208ENST00000488463 HDGFL2Q7Z4V5 671 aaPredicted RBP19.94■□□□□ 0.78
COL9A2-208ENST00000488463 TERF2IPQ9NYB0 399 aa19.94■□□□□ 0.78
COL9A2-208ENST00000488463 NME9Q86XW9 330 aa19.93■□□□□ 0.78
COL9A2-208ENST00000488463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.93■□□□□ 0.78
COL9A2-208ENST00000488463 THSD7AQ9UPZ6 1657 aa19.92■□□□□ 0.78
COL9A2-208ENST00000488463 AATKQ6ZMQ8 1374 aa19.92■□□□□ 0.78
COL9A2-208ENST00000488463 ANKRD36BQ8N2N9 1353 aa19.92■□□□□ 0.78
COL9A2-208ENST00000488463 ARHGEF25Q86VW2 580 aa19.91■□□□□ 0.78
COL9A2-208ENST00000488463 OVOS2A0A0J9YW53 1432 aa19.91■□□□□ 0.78
COL9A2-208ENST00000488463 OVOS2Q6IE36 1432 aa19.91■□□□□ 0.78
COL9A2-208ENST00000488463 COL5A2P05997 1499 aaPredicted RBP19.91■□□□□ 0.78
COL9A2-208ENST00000488463 SEPT12Q8IYM1 358 aa19.9■□□□□ 0.78
COL9A2-208ENST00000488463 CCDC9Q9Y3X0 531 aaKnown RBP19.9■□□□□ 0.78
COL9A2-208ENST00000488463 SPATA31A1Q5TZJ5 1347 aa19.9■□□□□ 0.78
COL9A2-208ENST00000488463 HSPA5P11021 654 aaKnown RBP19.89■□□□□ 0.77
COL9A2-208ENST00000488463 RGPD5Q99666 1765 aa19.89■□□□□ 0.77
COL9A2-208ENST00000488463 FAM98CQ17RN3 349 aaKnown RBP19.88■□□□□ 0.77
COL9A2-208ENST00000488463 KCNH5Q8NCM2 988 aa19.88■□□□□ 0.77
COL9A2-208ENST00000488463 AXIN2Q9Y2T1 843 aa19.88■□□□□ 0.77
COL9A2-208ENST00000488463 EIF4G2P78344 907 aaKnown RBP eCLIP19.87■□□□□ 0.77
COL9A2-208ENST00000488463 CDCA8Q53HL2 280 aa19.87■□□□□ 0.77
COL9A2-208ENST00000488463 LARP1Q6PKG0 1096 aaKnown RBP19.87■□□□□ 0.77
COL9A2-208ENST00000488463 STRN4Q9NRL3 753 aa19.87■□□□□ 0.77
COL9A2-208ENST00000488463 ABCC6O95255 1503 aa19.86■□□□□ 0.77
COL9A2-208ENST00000488463 LTN1O94822 1766 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms