RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 CRYBG1Q9Y4K1 1723 aa16.28■□□□□ 0.2
NIPAL3-207ENST00000488155 TRPM1Q7Z4N2 1603 aa16.27■□□□□ 0.2
NIPAL3-207ENST00000488155 NUTM2GQ5VZR2 741 aa16.27■□□□□ 0.2
NIPAL3-207ENST00000488155 ATAD2Q6PL18 1390 aa16.26■□□□□ 0.19
NIPAL3-207ENST00000488155 CENPJQ9HC77 1338 aaPredicted RBP16.26■□□□□ 0.19
NIPAL3-207ENST00000488155 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
NIPAL3-207ENST00000488155 ACEP12821 1306 aa16.25■□□□□ 0.19
NIPAL3-207ENST00000488155 CABP2Q9NPB3 220 aa16.25■□□□□ 0.19
NIPAL3-207ENST00000488155 CCDC61Q9Y6R9 512 aa16.25■□□□□ 0.19
NIPAL3-207ENST00000488155 NRAPQ86VF7 1730 aa16.25■□□□□ 0.19
NIPAL3-207ENST00000488155 COL14A1Q05707 1796 aaKnown RBP16.24■□□□□ 0.19
NIPAL3-207ENST00000488155 VPS72Q15906 364 aa16.23■□□□□ 0.19
NIPAL3-207ENST00000488155 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
NIPAL3-207ENST00000488155 BTG4Q9NY30 223 aa16.23■□□□□ 0.19
NIPAL3-207ENST00000488155 PHRF1Q9P1Y6 1649 aaKnown RBP16.23■□□□□ 0.19
NIPAL3-207ENST00000488155 EP400Q96L91 3159 aa16.22■□□□□ 0.19
NIPAL3-207ENST00000488155 A0A0G2JS52 829 aa16.21■□□□□ 0.19
NIPAL3-207ENST00000488155 MYT1Q01538 1121 aa16.21■□□□□ 0.19
NIPAL3-207ENST00000488155 SEPT12Q8IYM1 358 aa16.21■□□□□ 0.19
NIPAL3-207ENST00000488155 PPIP5K1Q6PFW1 1433 aa16.2■□□□□ 0.18
NIPAL3-207ENST00000488155 PLEKHG3A1L390 1219 aa16.2■□□□□ 0.18
NIPAL3-207ENST00000488155 CHRNA2Q15822 529 aa16.2■□□□□ 0.18
NIPAL3-207ENST00000488155 PRDM11Q9NQV5 511 aa16.2■□□□□ 0.18
NIPAL3-207ENST00000488155 ROCK2O75116 1388 aaKnown RBP16.2■□□□□ 0.18
NIPAL3-207ENST00000488155 POLR3AO14802 1390 aaPredicted RBP16.19■□□□□ 0.18
NIPAL3-207ENST00000488155 ZC3H6P61129 1189 aaKnown RBP16.19■□□□□ 0.18
NIPAL3-207ENST00000488155 ABTB2Q8N961 1025 aa16.18■□□□□ 0.18
NIPAL3-207ENST00000488155 KIAA0232Q92628 1395 aa16.17■□□□□ 0.18
NIPAL3-207ENST00000488155 FAM98CQ17RN3 349 aaKnown RBP16.17■□□□□ 0.18
NIPAL3-207ENST00000488155 CABP1Q9NZU7 370 aa16.17■□□□□ 0.18
NIPAL3-207ENST00000488155 STRN4Q9NRL3 753 aa16.16■□□□□ 0.18
NIPAL3-207ENST00000488155 EVC2Q86UK5 1308 aa16.15■□□□□ 0.18
NIPAL3-207ENST00000488155 TRIM26Q12899 539 aaPredicted RBP16.14■□□□□ 0.17
NIPAL3-207ENST00000488155 KRT27Q7Z3Y8 459 aa16.14■□□□□ 0.17
NIPAL3-207ENST00000488155 NRKQ7Z2Y5 1582 aa16.13■□□□□ 0.17
NIPAL3-207ENST00000488155 AKAP12Q02952 1782 aa16.13■□□□□ 0.17
NIPAL3-207ENST00000488155 ZBTB7CA1YPR0 619 aa16.13■□□□□ 0.17
NIPAL3-207ENST00000488155 ONECUT3O60422 494 aaPredicted RBP16.13■□□□□ 0.17
NIPAL3-207ENST00000488155 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
NIPAL3-207ENST00000488155 FAM182BQ5T319 152 aa16.12■□□□□ 0.17
NIPAL3-207ENST00000488155 USP35Q9P2H5 1018 aa16.12■□□□□ 0.17
NIPAL3-207ENST00000488155 RGPD5Q99666 1765 aa16.12■□□□□ 0.17
NIPAL3-207ENST00000488155 SPATA31A5Q5VU36 1347 aa16.12■□□□□ 0.17
NIPAL3-207ENST00000488155 SPATA31A7Q8IWB4 1347 aa16.12■□□□□ 0.17
NIPAL3-207ENST00000488155 EVA1CP58658 441 aa16.11■□□□□ 0.17
NIPAL3-207ENST00000488155 DEFB132Q7Z7B7 95 aa16.11■□□□□ 0.17
NIPAL3-207ENST00000488155 NLRP13Q86W25 1043 aa16.11■□□□□ 0.17
NIPAL3-207ENST00000488155 CCDC125Q86Z20 511 aa16.11■□□□□ 0.17
NIPAL3-207ENST00000488155 CARD11Q9BXL7 1154 aa16.11■□□□□ 0.17
NIPAL3-207ENST00000488155 NLRP6P59044 892 aa16.1■□□□□ 0.17
NIPAL3-207ENST00000488155 USP6P35125 1406 aa16.1■□□□□ 0.17
NIPAL3-207ENST00000488155 PIK3C2AO00443 1686 aa16.09■□□□□ 0.17
NIPAL3-207ENST00000488155 SF3B2Q13435 895 aaKnown RBP16.09■□□□□ 0.17
NIPAL3-207ENST00000488155 BLMP54132 1417 aaPredicted RBP16.09■□□□□ 0.17
NIPAL3-207ENST00000488155 CAMTA1Q9Y6Y1 1673 aa16.08■□□□□ 0.17
NIPAL3-207ENST00000488155 GCP02774 474 aa16.08■□□□□ 0.16
NIPAL3-207ENST00000488155 USP19O94966 1318 aa16.08■□□□□ 0.16
NIPAL3-207ENST00000488155 SPATA31A1Q5TZJ5 1347 aa16.07■□□□□ 0.16
NIPAL3-207ENST00000488155 LMO7Q8WWI1 1683 aa16.07■□□□□ 0.16
NIPAL3-207ENST00000488155 THSD7AQ9UPZ6 1657 aa16.07■□□□□ 0.16
NIPAL3-207ENST00000488155 KAT6BQ8WYB5 2073 aa16.06■□□□□ 0.16
NIPAL3-207ENST00000488155 SSH2Q76I76 1423 aa16.06■□□□□ 0.16
NIPAL3-207ENST00000488155 SOX12O15370 315 aa16.06■□□□□ 0.16
NIPAL3-207ENST00000488155 LARP1Q6PKG0 1096 aaKnown RBP16.06■□□□□ 0.16
NIPAL3-207ENST00000488155 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
NIPAL3-207ENST00000488155 MON2Q7Z3U7 1717 aa16.05■□□□□ 0.16
NIPAL3-207ENST00000488155 BRD4O60885 1362 aaPredicted RBP16.04■□□□□ 0.16
NIPAL3-207ENST00000488155 CPDO75976 1380 aa16.04■□□□□ 0.16
NIPAL3-207ENST00000488155 TTC21BQ7Z4L5 1316 aa16.04■□□□□ 0.16
NIPAL3-207ENST00000488155 TMC1Q8TDI8 760 aa16.04■□□□□ 0.16
NIPAL3-207ENST00000488155 RGPD1P0DJD0 1748 aa16.04■□□□□ 0.16
NIPAL3-207ENST00000488155 COL18A1P39060 1754 aa16.03■□□□□ 0.16
NIPAL3-207ENST00000488155 ZNF692Q9BU19 519 aaPredicted RBP16.03■□□□□ 0.16
NIPAL3-207ENST00000488155 KTN1Q86UP2 1357 aaKnown RBP16.02■□□□□ 0.16
NIPAL3-207ENST00000488155 SLIT3O75094 1523 aa16.02■□□□□ 0.15
NIPAL3-207ENST00000488155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.01■□□□□ 0.15
NIPAL3-207ENST00000488155 TNS1Q9HBL0 1735 aaKnown RBP16.01■□□□□ 0.15
NIPAL3-207ENST00000488155 COL5A2P05997 1499 aaPredicted RBP16■□□□□ 0.15
NIPAL3-207ENST00000488155 TCP11L2Q8N4U5 519 aa16■□□□□ 0.15
NIPAL3-207ENST00000488155 SLC12A5Q9H2X9 1139 aa16■□□□□ 0.15
NIPAL3-207ENST00000488155 SBNO2Q9Y2G9 1366 aa16■□□□□ 0.15
NIPAL3-207ENST00000488155 BAG6P46379 1132 aa15.99■□□□□ 0.15
NIPAL3-207ENST00000488155 EN1Q05925 392 aaPredicted RBP15.99■□□□□ 0.15
NIPAL3-207ENST00000488155 LTN1O94822 1766 aa15.99■□□□□ 0.15
NIPAL3-207ENST00000488155 CPSF1Q10570 1443 aaKnown RBP15.99■□□□□ 0.15
NIPAL3-207ENST00000488155 TTC21AQ8NDW8 1320 aa15.98■□□□□ 0.15
NIPAL3-207ENST00000488155 PDE3BQ13370 1112 aa15.98■□□□□ 0.15
NIPAL3-207ENST00000488155 BARGINQ6ZT62 677 aa15.98■□□□□ 0.15
NIPAL3-207ENST00000488155 AXIN2Q9Y2T1 843 aa15.98■□□□□ 0.15
NIPAL3-207ENST00000488155 WNK3Q9BYP7 1800 aa15.97■□□□□ 0.15
NIPAL3-207ENST00000488155 ST20-MTHFSA0A0A6YYL1 179 aa15.97■□□□□ 0.15
NIPAL3-207ENST00000488155 TRIM37O94972 964 aa15.97■□□□□ 0.15
NIPAL3-207ENST00000488155 TOM1L2Q6ZVM7 507 aa15.97■□□□□ 0.15
NIPAL3-207ENST00000488155 PCGF6Q9BYE7 350 aa15.97■□□□□ 0.15
NIPAL3-207ENST00000488155 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
NIPAL3-207ENST00000488155 PARP4Q9UKK3 1724 aaKnown RBP15.97■□□□□ 0.15
NIPAL3-207ENST00000488155 SBF2Q86WG5 1849 aa15.96■□□□□ 0.15
NIPAL3-207ENST00000488155 FAM196AQ6ZSG2 479 aa15.96■□□□□ 0.15
NIPAL3-207ENST00000488155 NME9Q86XW9 330 aa15.96■□□□□ 0.15
NIPAL3-207ENST00000488155 KCNH5Q8NCM2 988 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms