RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
RPSA-208ENST00000487876 QTRT2Q9H974 415 aaKnown RBP18.4■□□□□ 0.54
RPSA-208ENST00000487876 PHRF1Q9P1Y6 1649 aaKnown RBP18.4■□□□□ 0.54
RPSA-208ENST00000487876 PLEKHG3A1L390 1219 aa18.39■□□□□ 0.53
RPSA-208ENST00000487876 PAK3O75914 559 aaPredicted RBP18.39■□□□□ 0.53
RPSA-208ENST00000487876 RXRBP28702 533 aa18.39■□□□□ 0.53
RPSA-208ENST00000487876 SLIT2O94813 1529 aa18.39■□□□□ 0.53
RPSA-208ENST00000487876 HAP1P54257 671 aaPredicted RBP18.38■□□□□ 0.53
RPSA-208ENST00000487876 RGS12O14924 1447 aa18.38■□□□□ 0.53
RPSA-208ENST00000487876 ATRNO75882 1429 aa18.38■□□□□ 0.53
RPSA-208ENST00000487876 CDK12Q9NYV4 1490 aaPredicted RBP18.38■□□□□ 0.53
RPSA-208ENST00000487876 NWD2Q9ULI1 1742 aa18.37■□□□□ 0.53
RPSA-208ENST00000487876 EVC2Q86UK5 1308 aa18.37■□□□□ 0.53
RPSA-208ENST00000487876 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
RPSA-208ENST00000487876 NRAPQ86VF7 1730 aa18.35■□□□□ 0.53
RPSA-208ENST00000487876 SBNO2Q9Y2G9 1366 aa18.35■□□□□ 0.53
RPSA-208ENST00000487876 RBM6P78332 1123 aaKnown RBP18.34■□□□□ 0.53
RPSA-208ENST00000487876 NUTM2GQ5VZR2 741 aa18.34■□□□□ 0.53
RPSA-208ENST00000487876 CABP1Q9NZU7 370 aa18.34■□□□□ 0.53
RPSA-208ENST00000487876 TRPC5Q9UL62 973 aaPredicted RBP18.34■□□□□ 0.53
RPSA-208ENST00000487876 COL14A1Q05707 1796 aaKnown RBP18.34■□□□□ 0.53
RPSA-208ENST00000487876 GLI3P10071 1580 aa18.34■□□□□ 0.53
RPSA-208ENST00000487876 NRKQ7Z2Y5 1582 aa18.33■□□□□ 0.52
RPSA-208ENST00000487876 USP6P35125 1406 aa18.32■□□□□ 0.52
RPSA-208ENST00000487876 PIK3C2AO00443 1686 aa18.31■□□□□ 0.52
RPSA-208ENST00000487876 CLSPNQ9HAW4 1339 aa18.31■□□□□ 0.52
RPSA-208ENST00000487876 MON2Q7Z3U7 1717 aa18.3■□□□□ 0.52
RPSA-208ENST00000487876 FAM83GA6ND36 823 aa18.3■□□□□ 0.52
RPSA-208ENST00000487876 UNC5CLQ8IV45 518 aa18.3■□□□□ 0.52
RPSA-208ENST00000487876 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
RPSA-208ENST00000487876 SSH2Q76I76 1423 aa18.28■□□□□ 0.52
RPSA-208ENST00000487876 ABTB2Q8N961 1025 aa18.27■□□□□ 0.52
RPSA-208ENST00000487876 CCER1Q8TC90 406 aaPredicted RBP18.27■□□□□ 0.52
RPSA-208ENST00000487876 EP400Q96L91 3159 aa18.27■□□□□ 0.51
RPSA-208ENST00000487876 BRWD3Q6RI45 1802 aa18.26■□□□□ 0.51
RPSA-208ENST00000487876 ST20-MTHFSA0A0A6YYL1 179 aa18.26■□□□□ 0.51
RPSA-208ENST00000487876 GJD4Q96KN9 370 aaPredicted RBP18.26■□□□□ 0.51
RPSA-208ENST00000487876 TESK2Q96S53 571 aa18.26■□□□□ 0.51
RPSA-208ENST00000487876 KIAA0232Q92628 1395 aa18.26■□□□□ 0.51
RPSA-208ENST00000487876 USP19O94966 1318 aa18.25■□□□□ 0.51
RPSA-208ENST00000487876 CPSF1Q10570 1443 aaKnown RBP18.25■□□□□ 0.51
RPSA-208ENST00000487876 BTG4Q9NY30 223 aa18.25■□□□□ 0.51
RPSA-208ENST00000487876 BRD4O60885 1362 aaPredicted RBP18.25■□□□□ 0.51
RPSA-208ENST00000487876 USP47Q96K76 1375 aa18.25■□□□□ 0.51
RPSA-208ENST00000487876 CD163L1Q9NR16 1453 aa18.25■□□□□ 0.51
RPSA-208ENST00000487876 ZC3H6P61129 1189 aaKnown RBP18.24■□□□□ 0.51
RPSA-208ENST00000487876 PRDM11Q9NQV5 511 aa18.24■□□□□ 0.51
RPSA-208ENST00000487876 LMO7Q8WWI1 1683 aa18.23■□□□□ 0.51
RPSA-208ENST00000487876 CHRNA2Q15822 529 aa18.23■□□□□ 0.51
RPSA-208ENST00000487876 VPS72Q15906 364 aa18.23■□□□□ 0.51
RPSA-208ENST00000487876 TIMELESSQ9UNS1 1208 aa18.23■□□□□ 0.51
RPSA-208ENST00000487876 SLIT3O75094 1523 aa18.23■□□□□ 0.51
RPSA-208ENST00000487876 KTN1Q86UP2 1357 aaKnown RBP18.21■□□□□ 0.51
RPSA-208ENST00000487876 UPF1Q92900 1129 aaKnown RBP eCLIP18.21■□□□□ 0.51
RPSA-208ENST00000487876 CCDC9Q9Y3X0 531 aaKnown RBP18.21■□□□□ 0.51
RPSA-208ENST00000487876 TTC21BQ7Z4L5 1316 aa18.21■□□□□ 0.51
RPSA-208ENST00000487876 NLRP13Q86W25 1043 aa18.2■□□□□ 0.5
RPSA-208ENST00000487876 TMC1Q8TDI8 760 aa18.2■□□□□ 0.5
RPSA-208ENST00000487876 CAMTA1Q9Y6Y1 1673 aa18.19■□□□□ 0.5
RPSA-208ENST00000487876 NLRP6P59044 892 aa18.19■□□□□ 0.5
RPSA-208ENST00000487876 ZNF692Q9BU19 519 aaPredicted RBP18.19■□□□□ 0.5
RPSA-208ENST00000487876 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
RPSA-208ENST00000487876 USP54Q70EL1 1684 aa18.18■□□□□ 0.5
RPSA-208ENST00000487876 GCP02774 474 aa18.18■□□□□ 0.5
RPSA-208ENST00000487876 A0A1W2PP64 1363 aa18.17■□□□□ 0.5
RPSA-208ENST00000487876 CPDO75976 1380 aa18.17■□□□□ 0.5
RPSA-208ENST00000487876 COL18A1P39060 1754 aa18.17■□□□□ 0.5
RPSA-208ENST00000487876 RGPD5Q99666 1765 aa18.16■□□□□ 0.5
RPSA-208ENST00000487876 TTC21AQ8NDW8 1320 aa18.16■□□□□ 0.5
RPSA-208ENST00000487876 MYOM1P52179 1685 aa18.15■□□□□ 0.5
RPSA-208ENST00000487876 THSD7AQ9UPZ6 1657 aa18.15■□□□□ 0.5
RPSA-208ENST00000487876 NFAT5O94916 1531 aa18.15■□□□□ 0.5
RPSA-208ENST00000487876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.5
RPSA-208ENST00000487876 PUS7Q96PZ0 661 aaKnown RBP18.15■□□□□ 0.5
RPSA-208ENST00000487876 STRN4Q9NRL3 753 aa18.15■□□□□ 0.5
RPSA-208ENST00000487876 ZRANB1Q9UGI0 708 aa18.15■□□□□ 0.5
RPSA-208ENST00000487876 SPATA31A5Q5VU36 1347 aa18.15■□□□□ 0.5
RPSA-208ENST00000487876 SPATA31A7Q8IWB4 1347 aa18.15■□□□□ 0.5
RPSA-208ENST00000487876 ZBTB7CA1YPR0 619 aa18.14■□□□□ 0.49
RPSA-208ENST00000487876 FAM98CQ17RN3 349 aaKnown RBP18.14■□□□□ 0.49
RPSA-208ENST00000487876 SEPT12Q8IYM1 358 aa18.14■□□□□ 0.49
RPSA-208ENST00000487876 EDC4Q6P2E9 1401 aaKnown RBP18.14■□□□□ 0.49
RPSA-208ENST00000487876 HDGFL2Q7Z4V5 671 aaPredicted RBP18.13■□□□□ 0.49
RPSA-208ENST00000487876 COL5A2P05997 1499 aaPredicted RBP18.13■□□□□ 0.49
RPSA-208ENST00000487876 LTN1O94822 1766 aa18.12■□□□□ 0.49
RPSA-208ENST00000487876 SOX12O15370 315 aa18.12■□□□□ 0.49
RPSA-208ENST00000487876 ONECUT3O60422 494 aaPredicted RBP18.12■□□□□ 0.49
RPSA-208ENST00000487876 NME9Q86XW9 330 aa18.12■□□□□ 0.49
RPSA-208ENST00000487876 NINLQ9Y2I6 1382 aa18.12■□□□□ 0.49
RPSA-208ENST00000487876 TMF1P82094 1093 aa18.11■□□□□ 0.49
RPSA-208ENST00000487876 TERF2IPQ9NYB0 399 aa18.11■□□□□ 0.49
RPSA-208ENST00000487876 SPATA31A1Q5TZJ5 1347 aa18.1■□□□□ 0.49
RPSA-208ENST00000487876 A0A0G2JS52 829 aa18.1■□□□□ 0.49
RPSA-208ENST00000487876 MYT1Q01538 1121 aa18.1■□□□□ 0.49
RPSA-208ENST00000487876 USP31Q70CQ4 1352 aa18.09■□□□□ 0.49
RPSA-208ENST00000487876 SLC24A1O60721 1099 aa18.09■□□□□ 0.49
RPSA-208ENST00000487876 LARP1Q6PKG0 1096 aaKnown RBP18.09■□□□□ 0.49
RPSA-208ENST00000487876 AATKQ6ZMQ8 1374 aa18.08■□□□□ 0.49
RPSA-208ENST00000487876 USP35Q9P2H5 1018 aa18.08■□□□□ 0.48
RPSA-208ENST00000487876 OVOS2A0A0J9YW53 1432 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms