RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 LOC105371045A0A1W2PR82 267 aa9.19□□□□□ -0.94
COL4A3-206ENST00000487633 SYT17Q9BSW7 474 aa9.19□□□□□ -0.94
COL4A3-206ENST00000487633 FHDC1Q9C0D6 1143 aaPredicted RBP9.19□□□□□ -0.94
COL4A3-206ENST00000487633 SPATA31A1Q5TZJ5 1347 aa9.19□□□□□ -0.94
COL4A3-206ENST00000487633 KNDC1Q76NI1 1749 aa9.19□□□□□ -0.94
COL4A3-206ENST00000487633 TMEM132EQ6IEE7 984 aa9.18□□□□□ -0.94
COL4A3-206ENST00000487633 FAM196AQ6ZSG2 479 aa9.18□□□□□ -0.94
COL4A3-206ENST00000487633 PARD3Q8TEW0 1356 aa9.18□□□□□ -0.94
COL4A3-206ENST00000487633 PEAK1Q9H792 1746 aa9.18□□□□□ -0.94
COL4A3-206ENST00000487633 NRXN1Q9ULB1 1477 aa9.18□□□□□ -0.94
COL4A3-206ENST00000487633 DCAF8L1A6NGE4 600 aa9.17□□□□□ -0.94
COL4A3-206ENST00000487633 NBPF8Q3BBV2 869 aa9.17□□□□□ -0.94
COL4A3-206ENST00000487633 NBPF14Q5TI25 921 aa9.17□□□□□ -0.94
COL4A3-206ENST00000487633 PROM2Q8N271 834 aa9.17□□□□□ -0.94
COL4A3-206ENST00000487633 PMFBP1Q8TBY8 1022 aa9.17□□□□□ -0.94
COL4A3-206ENST00000487633 USP35Q9P2H5 1018 aa9.17□□□□□ -0.94
COL4A3-206ENST00000487633 PHF8Q9UPP1 1060 aa9.17□□□□□ -0.94
COL4A3-206ENST00000487633 SBNO1A3KN83 1393 aa9.16□□□□□ -0.94
COL4A3-206ENST00000487633 ADGRF5Q8IZF2 1346 aa9.16□□□□□ -0.94
COL4A3-206ENST00000487633 CHRNA2Q15822 529 aa9.16□□□□□ -0.94
COL4A3-206ENST00000487633 SGIP1Q9BQI5 828 aa9.16□□□□□ -0.94
COL4A3-206ENST00000487633 GIGYF1O75420 1035 aaPredicted RBP9.15□□□□□ -0.94
COL4A3-206ENST00000487633 PHRF1Q9P1Y6 1649 aaKnown RBP9.15□□□□□ -0.94
COL4A3-206ENST00000487633 RRBP1Q9P2E9 1410 aaKnown RBP9.14□□□□□ -0.95
COL4A3-206ENST00000487633 RGPD3A6NKT7 1758 aaPredicted RBP9.14□□□□□ -0.95
COL4A3-206ENST00000487633 RGPD4Q7Z3J3 1758 aa9.14□□□□□ -0.95
COL4A3-206ENST00000487633 STRN4Q9NRL3 753 aa9.14□□□□□ -0.95
COL4A3-206ENST00000487633 ARHGEF10O15013 1369 aa9.12□□□□□ -0.95
COL4A3-206ENST00000487633 PARP4Q9UKK3 1724 aaKnown RBP9.12□□□□□ -0.95
COL4A3-206ENST00000487633 VGFO15240 615 aaPredicted RBP9.12□□□□□ -0.95
COL4A3-206ENST00000487633 PSME1Q06323 249 aa9.12□□□□□ -0.95
COL4A3-206ENST00000487633 KIAA0232Q92628 1395 aa9.12□□□□□ -0.95
COL4A3-206ENST00000487633 DLC1Q96QB1 1528 aa9.11□□□□□ -0.95
COL4A3-206ENST00000487633 SAFB2Q14151 953 aaKnown RBP eCLIP9.11□□□□□ -0.95
COL4A3-206ENST00000487633 LARP1Q6PKG0 1096 aaKnown RBP9.11□□□□□ -0.95
COL4A3-206ENST00000487633 ABCC11Q96J66 1382 aa9.11□□□□□ -0.95
COL4A3-206ENST00000487633 PRR36Q9H6K5 1346 aa9.1□□□□□ -0.95
COL4A3-206ENST00000487633 LRRC37A3O60309 1634 aa9.1□□□□□ -0.95
COL4A3-206ENST00000487633 PRDM11Q9NQV5 511 aa9.1□□□□□ -0.95
COL4A3-206ENST00000487633 ROCK1Q13464 1354 aa9.1□□□□□ -0.95
COL4A3-206ENST00000487633 LMO7Q8WWI1 1683 aa9.1□□□□□ -0.95
COL4A3-206ENST00000487633 YTHDC2Q9H6S0 1430 aaKnown RBP9.09□□□□□ -0.95
COL4A3-206ENST00000487633 CAPN15O75808 1086 aa9.09□□□□□ -0.95
COL4A3-206ENST00000487633 ITGAEP38570 1179 aa9.09□□□□□ -0.95
COL4A3-206ENST00000487633 ZC3H6P61129 1189 aaKnown RBP9.09□□□□□ -0.95
COL4A3-206ENST00000487633 PDE3BQ13370 1112 aa9.09□□□□□ -0.95
COL4A3-206ENST00000487633 NUTM2GQ5VZR2 741 aa9.09□□□□□ -0.95
COL4A3-206ENST00000487633 SSH2Q76I76 1423 aa9.08□□□□□ -0.96
COL4A3-206ENST00000487633 BARGINQ6ZT62 677 aa9.08□□□□□ -0.96
COL4A3-206ENST00000487633 NLGN2Q8NFZ4 835 aa9.07□□□□□ -0.96
COL4A3-206ENST00000487633 BCL11BQ9C0K0 894 aaPredicted RBP9.07□□□□□ -0.96
COL4A3-206ENST00000487633 WNK3Q9BYP7 1800 aa9.07□□□□□ -0.96
COL4A3-206ENST00000487633 ACIN1Q9UKV3 1341 aaKnown RBP9.06□□□□□ -0.96
COL4A3-206ENST00000487633 PAPPAQ13219 1627 aa9.06□□□□□ -0.96
COL4A3-206ENST00000487633 COL24A1Q17RW2 1714 aa9.06□□□□□ -0.96
COL4A3-206ENST00000487633 TUBGCP6Q96RT7 1819 aa9.06□□□□□ -0.96
COL4A3-206ENST00000487633 PLSCR1O15162 318 aa9.06□□□□□ -0.96
COL4A3-206ENST00000487633 YBX3P16989 372 aaKnown RBP eCLIP9.06□□□□□ -0.96
COL4A3-206ENST00000487633 SLC15A2Q16348 729 aa9.06□□□□□ -0.96
COL4A3-206ENST00000487633 GPR162Q16538 588 aa9.06□□□□□ -0.96
COL4A3-206ENST00000487633 COL13A1Q5TAT6 717 aaPredicted RBP9.06□□□□□ -0.96
COL4A3-206ENST00000487633 RPGRIP1LQ68CZ1 1315 aa9.05□□□□□ -0.96
COL4A3-206ENST00000487633 AKAP12Q02952 1782 aa9.05□□□□□ -0.96
COL4A3-206ENST00000487633 ATP7BP35670 1465 aa9.05□□□□□ -0.96
COL4A3-206ENST00000487633 HSPA6P17066 643 aa9.05□□□□□ -0.96
COL4A3-206ENST00000487633 PELP1Q8IZL8 1130 aaKnown RBP9.05□□□□□ -0.96
COL4A3-206ENST00000487633 ARXQ96QS3 562 aa9.05□□□□□ -0.96
COL4A3-206ENST00000487633 HIRIP3Q9BW71 556 aaPredicted RBP9.05□□□□□ -0.96
COL4A3-206ENST00000487633 PIK3C2GO75747 1445 aa9.05□□□□□ -0.96
COL4A3-206ENST00000487633 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
COL4A3-206ENST00000487633 TXNRD1Q16881 649 aa9.04□□□□□ -0.96
COL4A3-206ENST00000487633 RGL3Q3MIN7 710 aa9.04□□□□□ -0.96
COL4A3-206ENST00000487633 TCP11L2Q8N4U5 519 aa9.04□□□□□ -0.96
COL4A3-206ENST00000487633 PRAM1Q96QH2 718 aa9.04□□□□□ -0.96
COL4A3-206ENST00000487633 MTFR1LQ9H019 292 aa9.04□□□□□ -0.96
COL4A3-206ENST00000487633 MAP3K5Q99683 1374 aa9.03□□□□□ -0.96
COL4A3-206ENST00000487633 PAK3O75914 559 aaPredicted RBP9.03□□□□□ -0.96
COL4A3-206ENST00000487633 ZNF827Q17R98 1081 aa9.03□□□□□ -0.96
COL4A3-206ENST00000487633 KLHL34Q8N239 644 aa9.03□□□□□ -0.96
COL4A3-206ENST00000487633 MARCH10Q8NA82 808 aaPredicted RBP9.03□□□□□ -0.96
COL4A3-206ENST00000487633 RGPD5Q99666 1765 aa9.03□□□□□ -0.96
COL4A3-206ENST00000487633 OVOS2A0A0G2JMS6 1433 aa9.03□□□□□ -0.96
COL4A3-206ENST00000487633 OVOS2A0A0J9YW53 1432 aa9.03□□□□□ -0.96
COL4A3-206ENST00000487633 OVOS2Q6IE36 1432 aa9.03□□□□□ -0.96
COL4A3-206ENST00000487633 CFAP70Q5T0N1 1121 aa9.02□□□□□ -0.97
COL4A3-206ENST00000487633 DNAJC5GQ8N7S2 189 aa9.02□□□□□ -0.97
COL4A3-206ENST00000487633 ZNF526Q8TF50 670 aaPredicted RBP9.02□□□□□ -0.97
COL4A3-206ENST00000487633 PCNTO95613 3336 aa9.02□□□□□ -0.97
COL4A3-206ENST00000487633 SPATA31E1Q6ZUB1 1445 aa9.02□□□□□ -0.97
COL4A3-206ENST00000487633 COL5A2P05997 1499 aaPredicted RBP9.02□□□□□ -0.97
COL4A3-206ENST00000487633 TOPAZ1Q8N9V7 1692 aa9.01□□□□□ -0.97
COL4A3-206ENST00000487633 EVA1CP58658 441 aa9.01□□□□□ -0.97
COL4A3-206ENST00000487633 ANKARQ7Z5J8 1434 aa9.01□□□□□ -0.97
COL4A3-206ENST00000487633 STK32BQ9NY57 414 aa9.01□□□□□ -0.97
COL4A3-206ENST00000487633 COL18A1P39060 1754 aa9□□□□□ -0.97
COL4A3-206ENST00000487633 HTRA3P83110 453 aa9□□□□□ -0.97
COL4A3-206ENST00000487633 APLP2Q06481 763 aa9□□□□□ -0.97
COL4A3-206ENST00000487633 GPRASP1Q5JY77 1395 aa8.99□□□□□ -0.97
COL4A3-206ENST00000487633 SIRT1Q96EB6 747 aa8.99□□□□□ -0.97
COL4A3-206ENST00000487633 TULP4Q9NRJ4 1543 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms