RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 CARMIL2Q6F5E8 1435 aa9.13□□□□□ -0.95
USP41-204ENST00000486536 CLASP1Q7Z460 1538 aa9.12□□□□□ -0.95
USP41-204ENST00000486536 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
USP41-204ENST00000486536 POTEHQ6S545 545 aa9.12□□□□□ -0.95
USP41-204ENST00000486536 HELBQ8NG08 1087 aaPredicted RBP9.12□□□□□ -0.95
USP41-204ENST00000486536 LRRN4Q8WUT4 740 aa9.12□□□□□ -0.95
USP41-204ENST00000486536 TSC1Q92574 1164 aa9.12□□□□□ -0.95
USP41-204ENST00000486536 KCNH8Q96L42 1107 aa9.12□□□□□ -0.95
USP41-204ENST00000486536 ZBED2Q9BTP6 218 aa9.12□□□□□ -0.95
USP41-204ENST00000486536 GZF1Q9H116 711 aaPredicted RBP9.12□□□□□ -0.95
USP41-204ENST00000486536 DISP1Q96F81 1524 aa9.11□□□□□ -0.95
USP41-204ENST00000486536 VAC14Q08AM6 782 aa9.11□□□□□ -0.95
USP41-204ENST00000486536 MAMSTRQ6ZN01 415 aa9.11□□□□□ -0.95
USP41-204ENST00000486536 CASKIN1Q8WXD9 1431 aa9.11□□□□□ -0.95
USP41-204ENST00000486536 C6orf229H3BNL8 230 aa9.1□□□□□ -0.95
USP41-204ENST00000486536 SNPHO15079 494 aa9.1□□□□□ -0.95
USP41-204ENST00000486536 GPR37L1O60883 481 aa9.1□□□□□ -0.95
USP41-204ENST00000486536 CFAP70Q5T0N1 1121 aa9.1□□□□□ -0.95
USP41-204ENST00000486536 PPP1R12CQ9BZL4 782 aa9.1□□□□□ -0.95
USP41-204ENST00000486536 MAP3K1Q13233 1512 aa9.1□□□□□ -0.95
USP41-204ENST00000486536 FYCO1Q9BQS8 1478 aa9.09□□□□□ -0.95
USP41-204ENST00000486536 CFAP99D6REC4 459 aa9.09□□□□□ -0.95
USP41-204ENST00000486536 SRPK2P78362 688 aaKnown RBP9.09□□□□□ -0.95
USP41-204ENST00000486536 GRIPAP1Q4V328 841 aa9.09□□□□□ -0.95
USP41-204ENST00000486536 ALG2Q9H553 416 aa9.09□□□□□ -0.95
USP41-204ENST00000486536 KIAA0556O60303 1618 aa9.09□□□□□ -0.95
USP41-204ENST00000486536 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.08□□□□□ -0.96
USP41-204ENST00000486536 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
USP41-204ENST00000486536 TMCO4Q5TGY1 634 aa9.08□□□□□ -0.96
USP41-204ENST00000486536 RABGEF1Q9UJ41 708 aa9.08□□□□□ -0.96
USP41-204ENST00000486536 PRG4Q92954 1404 aaPredicted RBP9.07□□□□□ -0.96
USP41-204ENST00000486536 PSEN2P49810 448 aa9.07□□□□□ -0.96
USP41-204ENST00000486536 EPS8L1Q8TE68 723 aa9.07□□□□□ -0.96
USP41-204ENST00000486536 SEPT9Q9UHD8 586 aaPredicted RBP9.07□□□□□ -0.96
USP41-204ENST00000486536 CSB-PGBD3P0DP91 1061 aa9.06□□□□□ -0.96
USP41-204ENST00000486536 FUT2Q10981 343 aa9.06□□□□□ -0.96
USP41-204ENST00000486536 SHROOM2Q13796 1616 aa9.05□□□□□ -0.96
USP41-204ENST00000486536 PALM3A6NDB9 673 aaPredicted RBP9.05□□□□□ -0.96
USP41-204ENST00000486536 LMOD1P29536 600 aaPredicted RBP9.05□□□□□ -0.96
USP41-204ENST00000486536 SLF2Q8IX21 1173 aa9.05□□□□□ -0.96
USP41-204ENST00000486536 SYMPKQ92797 1274 aaKnown RBP9.05□□□□□ -0.96
USP41-204ENST00000486536 TFIP11Q9UBB9 837 aaKnown RBP9.05□□□□□ -0.96
USP41-204ENST00000486536 PCF11O94913 1555 aaKnown RBP9.04□□□□□ -0.96
USP41-204ENST00000486536 PATL2C9JE40 543 aaKnown RBP9.04□□□□□ -0.96
USP41-204ENST00000486536 ATP6V1AP38606 617 aa9.04□□□□□ -0.96
USP41-204ENST00000486536 RGS22Q8NE09 1264 aa9.04□□□□□ -0.96
USP41-204ENST00000486536 USTQ9Y2C2 406 aa9.04□□□□□ -0.96
USP41-204ENST00000486536 CCDC18Q5T9S5 1454 aa9.03□□□□□ -0.96
USP41-204ENST00000486536 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
USP41-204ENST00000486536 BRD1O95696 1058 aa9.03□□□□□ -0.96
USP41-204ENST00000486536 SOX11P35716 441 aa9.03□□□□□ -0.96
USP41-204ENST00000486536 NR6A1Q15406 480 aa9.03□□□□□ -0.96
USP41-204ENST00000486536 FAM98CQ17RN3 349 aaKnown RBP9.03□□□□□ -0.96
USP41-204ENST00000486536 PRR7Q8TB68 274 aa9.03□□□□□ -0.96
USP41-204ENST00000486536 SLC4A5Q9BY07 1137 aa9.03□□□□□ -0.96
USP41-204ENST00000486536 PTPRGP23470 1445 aa9.03□□□□□ -0.96
USP41-204ENST00000486536 CFHP08603 1231 aa9.02□□□□□ -0.97
USP41-204ENST00000486536 MFAP1P55081 439 aaKnown RBP9.02□□□□□ -0.97
USP41-204ENST00000486536 SEMA3FQ13275 785 aa9.02□□□□□ -0.97
USP41-204ENST00000486536 MTMR7Q9Y216 660 aa9.02□□□□□ -0.97
USP41-204ENST00000486536 TIAM1Q13009 1591 aa9.02□□□□□ -0.97
USP41-204ENST00000486536 KCNA1Q09470 495 aa9.01□□□□□ -0.97
USP41-204ENST00000486536 KANK4Q5T7N3 995 aaPredicted RBP9.01□□□□□ -0.97
USP41-204ENST00000486536 SAMD7Q7Z3H4 446 aa9.01□□□□□ -0.97
USP41-204ENST00000486536 PPARGC1BQ86YN6 1023 aaKnown RBP9.01□□□□□ -0.97
USP41-204ENST00000486536 PNMA1Q8ND90 353 aa9.01□□□□□ -0.97
USP41-204ENST00000486536 HECW1Q76N89 1606 aa9.01□□□□□ -0.97
USP41-204ENST00000486536 LRRC9Q6ZRR7 1453 aa9.01□□□□□ -0.97
USP41-204ENST00000486536 PER1O15534 1290 aaPredicted RBP9□□□□□ -0.97
USP41-204ENST00000486536 CDCA8Q53HL2 280 aa9□□□□□ -0.97
USP41-204ENST00000486536 UCN2Q96RP3 112 aa9□□□□□ -0.97
USP41-204ENST00000486536 EPRSP07814 1512 aaKnown RBP9□□□□□ -0.97
USP41-204ENST00000486536 CARNS1A5YM72 827 aa8.99□□□□□ -0.97
USP41-204ENST00000486536 DMRTA1Q5VZB9 504 aa8.99□□□□□ -0.97
USP41-204ENST00000486536 CDK11AQ9UQ88 783 aaPredicted RBP8.99□□□□□ -0.97
USP41-204ENST00000486536 NUP153P49790 1475 aaKnown RBP8.98□□□□□ -0.97
USP41-204ENST00000486536 PLB1Q6P1J6 1458 aa8.98□□□□□ -0.97
USP41-204ENST00000486536 RETREG3Q86VR2 466 aa8.98□□□□□ -0.97
USP41-204ENST00000486536 PCGF6Q9BYE7 350 aa8.98□□□□□ -0.97
USP41-204ENST00000486536 TTBK1Q5TCY1 1321 aaPredicted RBP8.98□□□□□ -0.97
USP41-204ENST00000486536 ABCA8O94911 1581 aa8.98□□□□□ -0.97
USP41-204ENST00000486536 MTUS2Q5JR59 1369 aa8.98□□□□□ -0.97
USP41-204ENST00000486536 RAPGEF6Q8TEU7 1601 aa8.98□□□□□ -0.97
USP41-204ENST00000486536 CFAP43Q8NDM7 1665 aa8.97□□□□□ -0.97
USP41-204ENST00000486536 UACAQ9BZF9 1416 aa8.97□□□□□ -0.97
USP41-204ENST00000486536 RNF40O75150 1001 aa8.97□□□□□ -0.97
USP41-204ENST00000486536 ATG7O95352 703 aa8.97□□□□□ -0.97
USP41-204ENST00000486536 EIF4G2P78344 907 aaKnown RBP eCLIP8.97□□□□□ -0.97
USP41-204ENST00000486536 KMT5BQ4FZB7 885 aa8.97□□□□□ -0.97
USP41-204ENST00000486536 POTEEQ6S8J3 1075 aa8.97□□□□□ -0.97
USP41-204ENST00000486536 LAPTM4BQ86VI4 370 aa8.97□□□□□ -0.97
USP41-204ENST00000486536 VPS9D1Q9Y2B5 631 aa8.97□□□□□ -0.97
USP41-204ENST00000486536 AXIN2Q9Y2T1 843 aa8.97□□□□□ -0.97
USP41-204ENST00000486536 Q3C1V9 767 aa8.96□□□□□ -0.98
USP41-204ENST00000486536 MORN1Q5T089 497 aa8.96□□□□□ -0.98
USP41-204ENST00000486536 DESI1Q6ICB0 168 aa8.96□□□□□ -0.98
USP41-204ENST00000486536 TBC1D9Q6ZT07 1266 aa8.96□□□□□ -0.98
USP41-204ENST00000486536 VRTNQ9H8Y1 702 aa8.96□□□□□ -0.98
USP41-204ENST00000486536 MAFBQ9Y5Q3 323 aaPredicted RBP8.96□□□□□ -0.98
USP41-204ENST00000486536 ERBB3P21860 1342 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms