RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 CARD11Q9BXL7 1154 aa23.75■■□□□ 1.39
CCHCR1-214ENST00000486060 USP21Q9UK80 565 aa23.75■■□□□ 1.39
CCHCR1-214ENST00000486060 NWD2Q9ULI1 1742 aa23.75■■□□□ 1.39
CCHCR1-214ENST00000486060 ATRNO75882 1429 aa23.75■■□□□ 1.39
CCHCR1-214ENST00000486060 RXRBP28702 533 aa23.74■■□□□ 1.39
CCHCR1-214ENST00000486060 CDK12Q9NYV4 1490 aaPredicted RBP23.74■■□□□ 1.39
CCHCR1-214ENST00000486060 NRAPQ86VF7 1730 aa23.73■■□□□ 1.39
CCHCR1-214ENST00000486060 EVC2Q86UK5 1308 aa23.72■■□□□ 1.39
CCHCR1-214ENST00000486060 RGS12O14924 1447 aa23.71■■□□□ 1.39
CCHCR1-214ENST00000486060 SBNO2Q9Y2G9 1366 aa23.71■■□□□ 1.39
CCHCR1-214ENST00000486060 PAK3O75914 559 aaPredicted RBP23.71■■□□□ 1.39
CCHCR1-214ENST00000486060 RBM6P78332 1123 aaKnown RBP23.69■■□□□ 1.38
CCHCR1-214ENST00000486060 CABP1Q9NZU7 370 aa23.69■■□□□ 1.38
CCHCR1-214ENST00000486060 GLI3P10071 1580 aa23.69■■□□□ 1.38
CCHCR1-214ENST00000486060 COL14A1Q05707 1796 aaKnown RBP23.68■■□□□ 1.38
CCHCR1-214ENST00000486060 CLSPNQ9HAW4 1339 aa23.67■■□□□ 1.38
CCHCR1-214ENST00000486060 TRPC5Q9UL62 973 aaPredicted RBP23.67■■□□□ 1.38
CCHCR1-214ENST00000486060 NRKQ7Z2Y5 1582 aa23.66■■□□□ 1.38
CCHCR1-214ENST00000486060 FAM83GA6ND36 823 aa23.66■■□□□ 1.38
CCHCR1-214ENST00000486060 HAP1P54257 671 aaPredicted RBP23.66■■□□□ 1.38
CCHCR1-214ENST00000486060 MON2Q7Z3U7 1717 aa23.66■■□□□ 1.38
CCHCR1-214ENST00000486060 PIK3C2AO00443 1686 aa23.66■■□□□ 1.38
CCHCR1-214ENST00000486060 NUTM2GQ5VZR2 741 aa23.65■■□□□ 1.38
CCHCR1-214ENST00000486060 BRWD3Q6RI45 1802 aa23.65■■□□□ 1.38
CCHCR1-214ENST00000486060 USP6P35125 1406 aa23.65■■□□□ 1.38
CCHCR1-214ENST00000486060 SSH2Q76I76 1423 aa23.65■■□□□ 1.38
CCHCR1-214ENST00000486060 UNC5CLQ8IV45 518 aa23.64■■□□□ 1.37
CCHCR1-214ENST00000486060 TESK2Q96S53 571 aa23.61■■□□□ 1.37
CCHCR1-214ENST00000486060 CPSF1Q10570 1443 aaKnown RBP23.6■■□□□ 1.37
CCHCR1-214ENST00000486060 ATAD2Q6PL18 1390 aa23.6■■□□□ 1.37
CCHCR1-214ENST00000486060 CD163L1Q9NR16 1453 aa23.6■■□□□ 1.37
CCHCR1-214ENST00000486060 ST20-MTHFSA0A0A6YYL1 179 aa23.59■■□□□ 1.37
CCHCR1-214ENST00000486060 ABTB2Q8N961 1025 aa23.59■■□□□ 1.37
CCHCR1-214ENST00000486060 GJD4Q96KN9 370 aaPredicted RBP23.59■■□□□ 1.37
CCHCR1-214ENST00000486060 USP19O94966 1318 aa23.59■■□□□ 1.37
CCHCR1-214ENST00000486060 BRD4O60885 1362 aaPredicted RBP23.58■■□□□ 1.37
CCHCR1-214ENST00000486060 KIAA0232Q92628 1395 aa23.57■■□□□ 1.36
CCHCR1-214ENST00000486060 TIMELESSQ9UNS1 1208 aa23.57■■□□□ 1.36
CCHCR1-214ENST00000486060 LMO7Q8WWI1 1683 aa23.57■■□□□ 1.36
CCHCR1-214ENST00000486060 EP400Q96L91 3159 aa23.56■■□□□ 1.36
CCHCR1-214ENST00000486060 SLIT3O75094 1523 aa23.56■■□□□ 1.36
CCHCR1-214ENST00000486060 VPS72Q15906 364 aa23.55■■□□□ 1.36
CCHCR1-214ENST00000486060 BTG4Q9NY30 223 aa23.55■■□□□ 1.36
CCHCR1-214ENST00000486060 USP47Q96K76 1375 aa23.54■■□□□ 1.36
CCHCR1-214ENST00000486060 ZC3H6P61129 1189 aaKnown RBP23.54■■□□□ 1.36
CCHCR1-214ENST00000486060 CCER1Q8TC90 406 aaPredicted RBP23.54■■□□□ 1.36
CCHCR1-214ENST00000486060 CHRNA2Q15822 529 aa23.53■■□□□ 1.36
CCHCR1-214ENST00000486060 UPF1Q92900 1129 aaKnown RBP eCLIP23.53■■□□□ 1.36
CCHCR1-214ENST00000486060 USP54Q70EL1 1684 aa23.53■■□□□ 1.36
CCHCR1-214ENST00000486060 COL18A1P39060 1754 aa23.52■■□□□ 1.36
CCHCR1-214ENST00000486060 RGPD5Q99666 1765 aa23.52■■□□□ 1.36
CCHCR1-214ENST00000486060 PRDM11Q9NQV5 511 aa23.52■■□□□ 1.36
CCHCR1-214ENST00000486060 TTC21BQ7Z4L5 1316 aa23.52■■□□□ 1.36
CCHCR1-214ENST00000486060 CAMTA1Q9Y6Y1 1673 aa23.51■■□□□ 1.35
CCHCR1-214ENST00000486060 NLRP13Q86W25 1043 aa23.51■■□□□ 1.35
CCHCR1-214ENST00000486060 ZNF692Q9BU19 519 aaPredicted RBP23.51■■□□□ 1.35
CCHCR1-214ENST00000486060 SLC12A5Q9H2X9 1139 aa23.51■■□□□ 1.35
CCHCR1-214ENST00000486060 KTN1Q86UP2 1357 aaKnown RBP23.5■■□□□ 1.35
CCHCR1-214ENST00000486060 GCP02774 474 aa23.49■■□□□ 1.35
CCHCR1-214ENST00000486060 CPDO75976 1380 aa23.49■■□□□ 1.35
CCHCR1-214ENST00000486060 NLRP6P59044 892 aa23.48■■□□□ 1.35
CCHCR1-214ENST00000486060 PUS7Q96PZ0 661 aaKnown RBP23.48■■□□□ 1.35
CCHCR1-214ENST00000486060 TMC1Q8TDI8 760 aa23.46■■□□□ 1.35
CCHCR1-214ENST00000486060 MYOM1P52179 1685 aa23.45■■□□□ 1.34
CCHCR1-214ENST00000486060 THSD7AQ9UPZ6 1657 aa23.45■■□□□ 1.34
CCHCR1-214ENST00000486060 A0A1W2PP64 1363 aa23.45■■□□□ 1.34
CCHCR1-214ENST00000486060 TTC21AQ8NDW8 1320 aa23.45■■□□□ 1.34
CCHCR1-214ENST00000486060 ONECUT3O60422 494 aaPredicted RBP23.45■■□□□ 1.34
CCHCR1-214ENST00000486060 ZRANB1Q9UGI0 708 aa23.45■■□□□ 1.34
CCHCR1-214ENST00000486060 CCDC9Q9Y3X0 531 aaKnown RBP23.45■■□□□ 1.34
CCHCR1-214ENST00000486060 NFAT5O94916 1531 aa23.44■■□□□ 1.34
CCHCR1-214ENST00000486060 SPATA31A5Q5VU36 1347 aa23.44■■□□□ 1.34
CCHCR1-214ENST00000486060 SPATA31A7Q8IWB4 1347 aa23.44■■□□□ 1.34
CCHCR1-214ENST00000486060 LTN1O94822 1766 aa23.42■■□□□ 1.34
CCHCR1-214ENST00000486060 SEPT12Q8IYM1 358 aa23.42■■□□□ 1.34
CCHCR1-214ENST00000486060 EDC4Q6P2E9 1401 aaKnown RBP23.41■■□□□ 1.34
CCHCR1-214ENST00000486060 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
CCHCR1-214ENST00000486060 NME9Q86XW9 330 aa23.4■■□□□ 1.34
CCHCR1-214ENST00000486060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.4■■□□□ 1.34
CCHCR1-214ENST00000486060 STRN4Q9NRL3 753 aa23.4■■□□□ 1.34
CCHCR1-214ENST00000486060 COL5A2P05997 1499 aaPredicted RBP23.4■■□□□ 1.34
CCHCR1-214ENST00000486060 USP31Q70CQ4 1352 aa23.4■■□□□ 1.34
CCHCR1-214ENST00000486060 SPATA31A1Q5TZJ5 1347 aa23.38■■□□□ 1.33
CCHCR1-214ENST00000486060 TMF1P82094 1093 aa23.38■■□□□ 1.33
CCHCR1-214ENST00000486060 HDGFL2Q7Z4V5 671 aaPredicted RBP23.38■■□□□ 1.33
CCHCR1-214ENST00000486060 NINLQ9Y2I6 1382 aa23.38■■□□□ 1.33
CCHCR1-214ENST00000486060 WNK3Q9BYP7 1800 aa23.37■■□□□ 1.33
CCHCR1-214ENST00000486060 AATKQ6ZMQ8 1374 aa23.37■■□□□ 1.33
CCHCR1-214ENST00000486060 SLC24A1O60721 1099 aa23.36■■□□□ 1.33
CCHCR1-214ENST00000486060 LARP1Q6PKG0 1096 aaKnown RBP23.36■■□□□ 1.33
CCHCR1-214ENST00000486060 TERF2IPQ9NYB0 399 aa23.36■■□□□ 1.33
CCHCR1-214ENST00000486060 SOX12O15370 315 aa23.35■■□□□ 1.33
CCHCR1-214ENST00000486060 ARHGEF25Q86VW2 580 aa23.35■■□□□ 1.33
CCHCR1-214ENST00000486060 AXIN2Q9Y2T1 843 aa23.35■■□□□ 1.33
CCHCR1-214ENST00000486060 OVOS2A0A0J9YW53 1432 aa23.34■■□□□ 1.33
CCHCR1-214ENST00000486060 OVOS2Q6IE36 1432 aa23.34■■□□□ 1.33
CCHCR1-214ENST00000486060 ZBTB7CA1YPR0 619 aa23.34■■□□□ 1.33
CCHCR1-214ENST00000486060 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.33
CCHCR1-214ENST00000486060 ANKRD36BQ8N2N9 1353 aa23.33■■□□□ 1.33
CCHCR1-214ENST00000486060 EVA1CP58658 441 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms