RNA–Protein interactions for RNA: ENST00000485781.5

MDH1-213, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-213ENST00000485781 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
MDH1-213ENST00000485781 ACIN1Q9UKV3 1341 aaKnown RBP17.05■□□□□ 0.32
MDH1-213ENST00000485781 EZH2Q15910 746 aaKnown RBP17.05■□□□□ 0.32
MDH1-213ENST00000485781 DLC1Q96QB1 1528 aa17.05■□□□□ 0.32
MDH1-213ENST00000485781 DISP2A7MBM2 1401 aa17.04■□□□□ 0.32
MDH1-213ENST00000485781 MINK1Q8N4C8 1332 aaPredicted RBP17.04■□□□□ 0.32
MDH1-213ENST00000485781 TRAK1Q9UPV9 953 aa17.04■□□□□ 0.32
MDH1-213ENST00000485781 TRPM3Q9HCF6 1732 aaPredicted RBP17.04■□□□□ 0.32
MDH1-213ENST00000485781 ADGRB2O60241 1585 aa17.03■□□□□ 0.32
MDH1-213ENST00000485781 TRIM37O94972 964 aa17.03■□□□□ 0.32
MDH1-213ENST00000485781 FAM196AQ6ZSG2 479 aa17.03■□□□□ 0.32
MDH1-213ENST00000485781 ALS2Q96Q42 1657 aa17.02■□□□□ 0.32
MDH1-213ENST00000485781 STRN4Q9NRL3 753 aa17.02■□□□□ 0.32
MDH1-213ENST00000485781 APBA3O96018 575 aa17.01■□□□□ 0.31
MDH1-213ENST00000485781 THSD7AQ9UPZ6 1657 aa17.01■□□□□ 0.31
MDH1-213ENST00000485781 SPATA31A1Q5TZJ5 1347 aa17■□□□□ 0.31
MDH1-213ENST00000485781 PRR36Q9H6K5 1346 aa17■□□□□ 0.31
MDH1-213ENST00000485781 WASLO00401 505 aaPredicted RBP17■□□□□ 0.31
MDH1-213ENST00000485781 CAMKK2Q96RR4 588 aa17■□□□□ 0.31
MDH1-213ENST00000485781 TNS1Q9HBL0 1735 aaKnown RBP17■□□□□ 0.31
MDH1-213ENST00000485781 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
MDH1-213ENST00000485781 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
MDH1-213ENST00000485781 EVA1CP58658 441 aa16.98■□□□□ 0.31
MDH1-213ENST00000485781 PDE3BQ13370 1112 aa16.98■□□□□ 0.31
MDH1-213ENST00000485781 NBPF8Q3BBV2 869 aa16.98■□□□□ 0.31
MDH1-213ENST00000485781 NBPF14Q5TI25 921 aa16.98■□□□□ 0.31
MDH1-213ENST00000485781 USP35Q9P2H5 1018 aa16.98■□□□□ 0.31
MDH1-213ENST00000485781 PARD3Q8TEW0 1356 aa16.98■□□□□ 0.31
MDH1-213ENST00000485781 KIAA0232Q92628 1395 aa16.98■□□□□ 0.31
MDH1-213ENST00000485781 YY1P25490 414 aa16.97■□□□□ 0.31
MDH1-213ENST00000485781 ZC3H6P61129 1189 aaKnown RBP16.97■□□□□ 0.31
MDH1-213ENST00000485781 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.31
MDH1-213ENST00000485781 PPP1R1BQ9UD71 204 aaPredicted RBP16.96■□□□□ 0.31
MDH1-213ENST00000485781 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.31
MDH1-213ENST00000485781 NUTM2GQ5VZR2 741 aa16.95■□□□□ 0.3
MDH1-213ENST00000485781 ADGRB1O14514 1584 aa16.94■□□□□ 0.3
MDH1-213ENST00000485781 CRYBG1Q9Y4K1 1723 aa16.94■□□□□ 0.3
MDH1-213ENST00000485781 NUDT16Q96DE0 195 aaKnown RBP16.93■□□□□ 0.3
MDH1-213ENST00000485781 BARGINQ6ZT62 677 aa16.92■□□□□ 0.3
MDH1-213ENST00000485781 DCAF11Q8TEB1 546 aa16.92■□□□□ 0.3
MDH1-213ENST00000485781 ATP7BP35670 1465 aa16.92■□□□□ 0.3
MDH1-213ENST00000485781 ITSN1Q15811 1721 aa16.91■□□□□ 0.3
MDH1-213ENST00000485781 SPON1Q9HCB6 807 aa16.91■□□□□ 0.3
MDH1-213ENST00000485781 SSH2Q76I76 1423 aa16.9■□□□□ 0.3
MDH1-213ENST00000485781 PHRF1Q9P1Y6 1649 aaKnown RBP16.9■□□□□ 0.3
MDH1-213ENST00000485781 TCP11L2Q8N4U5 519 aa16.9■□□□□ 0.3
MDH1-213ENST00000485781 LARP1Q6PKG0 1096 aaKnown RBP16.88■□□□□ 0.29
MDH1-213ENST00000485781 RREB1Q92766 1687 aa16.88■□□□□ 0.29
MDH1-213ENST00000485781 KCNQ2O43526 872 aa16.87■□□□□ 0.29
MDH1-213ENST00000485781 ABTB2Q8N961 1025 aa16.87■□□□□ 0.29
MDH1-213ENST00000485781 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
MDH1-213ENST00000485781 CDK19Q9BWU1 502 aa16.87■□□□□ 0.29
MDH1-213ENST00000485781 ACEP12821 1306 aa16.87■□□□□ 0.29
MDH1-213ENST00000485781 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
MDH1-213ENST00000485781 C11orf95C9JLR9 678 aaPredicted RBP16.86■□□□□ 0.29
MDH1-213ENST00000485781 THRAP3Q9Y2W1 955 aaKnown RBP16.86■□□□□ 0.29
MDH1-213ENST00000485781 CCDC61Q9Y6R9 512 aa16.84■□□□□ 0.29
MDH1-213ENST00000485781 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
MDH1-213ENST00000485781 CAMTA1Q9Y6Y1 1673 aa16.84■□□□□ 0.29
MDH1-213ENST00000485781 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
MDH1-213ENST00000485781 POLR3AO14802 1390 aaPredicted RBP16.83■□□□□ 0.28
MDH1-213ENST00000485781 NLRP13Q86W25 1043 aa16.83■□□□□ 0.28
MDH1-213ENST00000485781 ARHGEF28Q8N1W1 1705 aaKnown RBP16.83■□□□□ 0.28
MDH1-213ENST00000485781 CPDO75976 1380 aa16.82■□□□□ 0.28
MDH1-213ENST00000485781 RAB3GAP2Q9H2M9 1393 aa16.82■□□□□ 0.28
MDH1-213ENST00000485781 NRKQ7Z2Y5 1582 aa16.81■□□□□ 0.28
MDH1-213ENST00000485781 PLEKHG3A1L390 1219 aa16.81■□□□□ 0.28
MDH1-213ENST00000485781 OVOS2A0A0G2JMS6 1433 aa16.8■□□□□ 0.28
MDH1-213ENST00000485781 OVOS2A0A0J9YW53 1432 aa16.8■□□□□ 0.28
MDH1-213ENST00000485781 OVOS2Q6IE36 1432 aa16.8■□□□□ 0.28
MDH1-213ENST00000485781 USP19O94966 1318 aa16.8■□□□□ 0.28
MDH1-213ENST00000485781 GCP02774 474 aa16.8■□□□□ 0.28
MDH1-213ENST00000485781 LMO7Q8WWI1 1683 aa16.78■□□□□ 0.28
MDH1-213ENST00000485781 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
MDH1-213ENST00000485781 DDB1Q16531 1140 aa16.78■□□□□ 0.28
MDH1-213ENST00000485781 PARP4Q9UKK3 1724 aaKnown RBP16.78■□□□□ 0.28
MDH1-213ENST00000485781 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
MDH1-213ENST00000485781 CRB1P82279 1406 aa16.78■□□□□ 0.28
MDH1-213ENST00000485781 PLSCR1O15162 318 aa16.77■□□□□ 0.28
MDH1-213ENST00000485781 BCL11BQ9C0K0 894 aaPredicted RBP16.77■□□□□ 0.28
MDH1-213ENST00000485781 COL5A2P05997 1499 aaPredicted RBP16.77■□□□□ 0.28
MDH1-213ENST00000485781 TOM1L2Q6ZVM7 507 aa16.76■□□□□ 0.27
MDH1-213ENST00000485781 PPIP5K1Q6PFW1 1433 aa16.74■□□□□ 0.27
MDH1-213ENST00000485781 NLRP6P59044 892 aa16.74■□□□□ 0.27
MDH1-213ENST00000485781 ANO8Q9HCE9 1232 aaPredicted RBP16.74■□□□□ 0.27
MDH1-213ENST00000485781 ZBTB7AO95365 584 aa16.73■□□□□ 0.27
MDH1-213ENST00000485781 BRD4O60885 1362 aaPredicted RBP16.73■□□□□ 0.27
MDH1-213ENST00000485781 RGPD3A6NKT7 1758 aaPredicted RBP16.72■□□□□ 0.27
MDH1-213ENST00000485781 RGPD4Q7Z3J3 1758 aa16.72■□□□□ 0.27
MDH1-213ENST00000485781 AATKQ6ZMQ8 1374 aa16.72■□□□□ 0.27
MDH1-213ENST00000485781 CABP2Q9NPB3 220 aa16.71■□□□□ 0.27
MDH1-213ENST00000485781 STK32BQ9NY57 414 aa16.71■□□□□ 0.27
MDH1-213ENST00000485781 ATF5Q9Y2D1 282 aaPredicted RBP16.71■□□□□ 0.27
MDH1-213ENST00000485781 PEAK1Q9H792 1746 aa16.7■□□□□ 0.26
MDH1-213ENST00000485781 CDCA7Q9BWT1 371 aaPredicted RBP16.7■□□□□ 0.26
MDH1-213ENST00000485781 SBF2Q86WG5 1849 aa16.7■□□□□ 0.26
MDH1-213ENST00000485781 LRRC37A3O60309 1634 aa16.7■□□□□ 0.26
MDH1-213ENST00000485781 CENPJQ9HC77 1338 aaPredicted RBP16.7■□□□□ 0.26
MDH1-213ENST00000485781 CSB-PGBD3P0DP91 1061 aa16.69■□□□□ 0.26
MDH1-213ENST00000485781 PTF1AQ7RTS3 328 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms