RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 FAM98CQ17RN3 349 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-211ENST00000485592 DCAF11Q8TEB1 546 aa20.17■□□□□ 0.82
SMARCD3-211ENST00000485592 PRR36Q9H6K5 1346 aa20.17■□□□□ 0.82
SMARCD3-211ENST00000485592 CRYBG1Q9Y4K1 1723 aa20.16■□□□□ 0.82
SMARCD3-211ENST00000485592 BAG6P46379 1132 aa20.16■□□□□ 0.82
SMARCD3-211ENST00000485592 NGDNQ8NEJ9 315 aaKnown RBP20.16■□□□□ 0.82
SMARCD3-211ENST00000485592 STAC3Q96MF2 364 aa20.16■□□□□ 0.82
SMARCD3-211ENST00000485592 ARHGEF28Q8N1W1 1705 aaKnown RBP20.15■□□□□ 0.82
SMARCD3-211ENST00000485592 RGPD1P0DJD0 1748 aa20.14■□□□□ 0.81
SMARCD3-211ENST00000485592 LRP5O75197 1615 aa20.14■□□□□ 0.81
SMARCD3-211ENST00000485592 PAK3O75914 559 aaPredicted RBP20.14■□□□□ 0.81
SMARCD3-211ENST00000485592 PRDM11Q9NQV5 511 aa20.12■□□□□ 0.81
SMARCD3-211ENST00000485592 ATP7BP35670 1465 aa20.11■□□□□ 0.81
SMARCD3-211ENST00000485592 SPATA31A5Q5VU36 1347 aa20.1■□□□□ 0.81
SMARCD3-211ENST00000485592 SPATA31A7Q8IWB4 1347 aa20.1■□□□□ 0.81
SMARCD3-211ENST00000485592 THSD7AQ9UPZ6 1657 aa20.1■□□□□ 0.81
SMARCD3-211ENST00000485592 PHRF1Q9P1Y6 1649 aaKnown RBP20.09■□□□□ 0.81
SMARCD3-211ENST00000485592 NUDT16Q96DE0 195 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-211ENST00000485592 KIAA0232Q92628 1395 aa20.06■□□□□ 0.8
SMARCD3-211ENST00000485592 TNS1Q9HBL0 1735 aaKnown RBP20.05■□□□□ 0.8
SMARCD3-211ENST00000485592 PSDA5PKW4 1024 aaPredicted RBP20.05■□□□□ 0.8
SMARCD3-211ENST00000485592 TOPAZ1Q8N9V7 1692 aa20.05■□□□□ 0.8
SMARCD3-211ENST00000485592 EN1Q05925 392 aaPredicted RBP20.04■□□□□ 0.8
SMARCD3-211ENST00000485592 FAM182BQ5T319 152 aa20.04■□□□□ 0.8
SMARCD3-211ENST00000485592 KIAA1210Q9ULL0 1709 aa20.03■□□□□ 0.8
SMARCD3-211ENST00000485592 HRCP23327 699 aa20.03■□□□□ 0.8
SMARCD3-211ENST00000485592 STRN4Q9NRL3 753 aa20.03■□□□□ 0.8
SMARCD3-211ENST00000485592 SPATA31A1Q5TZJ5 1347 aa20.02■□□□□ 0.8
SMARCD3-211ENST00000485592 DISP2A7MBM2 1401 aa20.02■□□□□ 0.8
SMARCD3-211ENST00000485592 CHRNA2Q15822 529 aa20.02■□□□□ 0.8
SMARCD3-211ENST00000485592 CDK19Q9BWU1 502 aa20.02■□□□□ 0.8
SMARCD3-211ENST00000485592 POLR3AO14802 1390 aaPredicted RBP20.01■□□□□ 0.79
SMARCD3-211ENST00000485592 ZC3H6P61129 1189 aaKnown RBP20■□□□□ 0.79
SMARCD3-211ENST00000485592 NUTM2GQ5VZR2 741 aa20■□□□□ 0.79
SMARCD3-211ENST00000485592 ACEP12821 1306 aa20■□□□□ 0.79
SMARCD3-211ENST00000485592 NRKQ7Z2Y5 1582 aa20■□□□□ 0.79
SMARCD3-211ENST00000485592 FAM196AQ6ZSG2 479 aa19.99■□□□□ 0.79
SMARCD3-211ENST00000485592 CCDC61Q9Y6R9 512 aa19.99■□□□□ 0.79
SMARCD3-211ENST00000485592 EVA1CP58658 441 aa19.98■□□□□ 0.79
SMARCD3-211ENST00000485592 SSH2Q76I76 1423 aa19.97■□□□□ 0.79
SMARCD3-211ENST00000485592 NBPF8Q3BBV2 869 aa19.97■□□□□ 0.79
SMARCD3-211ENST00000485592 USP35Q9P2H5 1018 aa19.97■□□□□ 0.79
SMARCD3-211ENST00000485592 PLEKHG3A1L390 1219 aa19.96■□□□□ 0.79
SMARCD3-211ENST00000485592 R3HDM1Q15032 1099 aaKnown RBP19.96■□□□□ 0.79
SMARCD3-211ENST00000485592 EZH2Q15910 746 aaKnown RBP19.96■□□□□ 0.79
SMARCD3-211ENST00000485592 ABTB2Q8N961 1025 aa19.96■□□□□ 0.79
SMARCD3-211ENST00000485592 TRIM37O94972 964 aa19.95■□□□□ 0.78
SMARCD3-211ENST00000485592 PARD3Q8TEW0 1356 aa19.95■□□□□ 0.78
SMARCD3-211ENST00000485592 PDE3BQ13370 1112 aa19.94■□□□□ 0.78
SMARCD3-211ENST00000485592 BARGINQ6ZT62 677 aa19.94■□□□□ 0.78
SMARCD3-211ENST00000485592 CPDO75976 1380 aa19.94■□□□□ 0.78
SMARCD3-211ENST00000485592 LMO7Q8WWI1 1683 aa19.94■□□□□ 0.78
SMARCD3-211ENST00000485592 CAMTA1Q9Y6Y1 1673 aa19.93■□□□□ 0.78
SMARCD3-211ENST00000485592 APBA3O96018 575 aa19.92■□□□□ 0.78
SMARCD3-211ENST00000485592 SRPK2P78362 688 aaKnown RBP19.92■□□□□ 0.78
SMARCD3-211ENST00000485592 CAMKK2Q96RR4 588 aa19.92■□□□□ 0.78
SMARCD3-211ENST00000485592 USP19O94966 1318 aa19.92■□□□□ 0.78
SMARCD3-211ENST00000485592 PPIP5K1Q6PFW1 1433 aa19.92■□□□□ 0.78
SMARCD3-211ENST00000485592 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
SMARCD3-211ENST00000485592 TCP11L2Q8N4U5 519 aa19.91■□□□□ 0.78
SMARCD3-211ENST00000485592 RREB1Q92766 1687 aa19.91■□□□□ 0.78
SMARCD3-211ENST00000485592 LARP1Q6PKG0 1096 aaKnown RBP19.9■□□□□ 0.78
SMARCD3-211ENST00000485592 CENPJQ9HC77 1338 aaPredicted RBP19.9■□□□□ 0.78
SMARCD3-211ENST00000485592 QRICH2Q9H0J4 1663 aa19.9■□□□□ 0.78
SMARCD3-211ENST00000485592 BRD4O60885 1362 aaPredicted RBP19.89■□□□□ 0.77
SMARCD3-211ENST00000485592 NBPF1Q3BBV0 1214 aa19.89■□□□□ 0.77
SMARCD3-211ENST00000485592 THRAP3Q9Y2W1 955 aaKnown RBP19.89■□□□□ 0.77
SMARCD3-211ENST00000485592 PARP4Q9UKK3 1724 aaKnown RBP19.88■□□□□ 0.77
SMARCD3-211ENST00000485592 NUP188Q5SRE5 1749 aa19.88■□□□□ 0.77
SMARCD3-211ENST00000485592 GCP02774 474 aa19.87■□□□□ 0.77
SMARCD3-211ENST00000485592 COL5A2P05997 1499 aaPredicted RBP19.86■□□□□ 0.77
SMARCD3-211ENST00000485592 CABP2Q9NPB3 220 aa19.86■□□□□ 0.77
SMARCD3-211ENST00000485592 CRB1P82279 1406 aa19.85■□□□□ 0.77
SMARCD3-211ENST00000485592 C11orf95C9JLR9 678 aaPredicted RBP19.84■□□□□ 0.77
SMARCD3-211ENST00000485592 NBPF14Q5TI25 921 aa19.84■□□□□ 0.77
SMARCD3-211ENST00000485592 USP6P35125 1406 aa19.84■□□□□ 0.77
SMARCD3-211ENST00000485592 ZBTB7CA1YPR0 619 aa19.83■□□□□ 0.77
SMARCD3-211ENST00000485592 SLIT3O75094 1523 aa19.81■□□□□ 0.76
SMARCD3-211ENST00000485592 NLRP6P59044 892 aa19.81■□□□□ 0.76
SMARCD3-211ENST00000485592 CABP1Q9NZU7 370 aa19.81■□□□□ 0.76
SMARCD3-211ENST00000485592 OVOS2A0A0G2JMS6 1433 aa19.81■□□□□ 0.76
SMARCD3-211ENST00000485592 OVOS2A0A0J9YW53 1432 aa19.81■□□□□ 0.76
SMARCD3-211ENST00000485592 OVOS2Q6IE36 1432 aa19.81■□□□□ 0.76
SMARCD3-211ENST00000485592 AATKQ6ZMQ8 1374 aa19.8■□□□□ 0.76
SMARCD3-211ENST00000485592 LRRC37A3O60309 1634 aa19.8■□□□□ 0.76
SMARCD3-211ENST00000485592 PIK3C2AO00443 1686 aa19.79■□□□□ 0.76
SMARCD3-211ENST00000485592 RGPD3A6NKT7 1758 aaPredicted RBP19.78■□□□□ 0.76
SMARCD3-211ENST00000485592 RGPD4Q7Z3J3 1758 aa19.78■□□□□ 0.76
SMARCD3-211ENST00000485592 PEAK1Q9H792 1746 aa19.78■□□□□ 0.76
SMARCD3-211ENST00000485592 WNK3Q9BYP7 1800 aa19.78■□□□□ 0.76
SMARCD3-211ENST00000485592 EVC2Q86UK5 1308 aa19.77■□□□□ 0.76
SMARCD3-211ENST00000485592 TRPM1Q7Z4N2 1603 aa19.77■□□□□ 0.76
SMARCD3-211ENST00000485592 TOM1L2Q6ZVM7 507 aa19.77■□□□□ 0.76
SMARCD3-211ENST00000485592 SBF2Q86WG5 1849 aa19.76■□□□□ 0.75
SMARCD3-211ENST00000485592 DDB1Q16531 1140 aa19.76■□□□□ 0.75
SMARCD3-211ENST00000485592 COL18A1P39060 1754 aa19.75■□□□□ 0.75
SMARCD3-211ENST00000485592 AKAP12Q02952 1782 aa19.75■□□□□ 0.75
SMARCD3-211ENST00000485592 CPSF1Q10570 1443 aaKnown RBP19.74■□□□□ 0.75
SMARCD3-211ENST00000485592 SPON1Q9HCB6 807 aa19.73■□□□□ 0.75
SMARCD3-211ENST00000485592 PPP1R1BQ9UD71 204 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms