RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 POLR3AO14802 1390 aaPredicted RBP23.67■■□□□ 1.38
CCDC78-214ENST00000485091 USP6P35125 1406 aa23.66■■□□□ 1.38
CCDC78-214ENST00000485091 MST1RQ04912 1400 aa23.66■■□□□ 1.38
CCDC78-214ENST00000485091 NME9Q86XW9 330 aa23.66■■□□□ 1.38
CCDC78-214ENST00000485091 NSD2O96028 1365 aa23.65■■□□□ 1.38
CCDC78-214ENST00000485091 TTC21BQ7Z4L5 1316 aa23.65■■□□□ 1.38
CCDC78-214ENST00000485091 PPP2R1AP30153 589 aa23.64■■□□□ 1.38
CCDC78-214ENST00000485091 ZRANB1Q9UGI0 708 aa23.64■■□□□ 1.37
CCDC78-214ENST00000485091 KIF20BQ96Q89 1820 aa23.63■■□□□ 1.37
CCDC78-214ENST00000485091 FOXO3O43524 673 aa23.62■■□□□ 1.37
CCDC78-214ENST00000485091 PSME1Q06323 249 aa23.62■■□□□ 1.37
CCDC78-214ENST00000485091 YTHDC1Q96MU7 727 aaKnown RBP23.62■■□□□ 1.37
CCDC78-214ENST00000485091 NLRP13Q86W25 1043 aa23.62■■□□□ 1.37
CCDC78-214ENST00000485091 PAK3O75914 559 aaPredicted RBP23.61■■□□□ 1.37
CCDC78-214ENST00000485091 NRKQ7Z2Y5 1582 aa23.6■■□□□ 1.37
CCDC78-214ENST00000485091 UBAP1LF5GYI3 381 aa23.6■■□□□ 1.37
CCDC78-214ENST00000485091 XPCQ01831 940 aaPredicted RBP23.6■■□□□ 1.37
CCDC78-214ENST00000485091 SSH2Q76I76 1423 aa23.59■■□□□ 1.37
CCDC78-214ENST00000485091 SLAIN2Q9P270 581 aa23.58■■□□□ 1.37
CCDC78-214ENST00000485091 BRD4O60885 1362 aaPredicted RBP23.58■■□□□ 1.36
CCDC78-214ENST00000485091 COG3Q96JB2 828 aa23.57■■□□□ 1.36
CCDC78-214ENST00000485091 ANKRD26Q9UPS8 1709 aa23.57■■□□□ 1.36
CCDC78-214ENST00000485091 DDX17Q92841 729 aaKnown RBP23.56■■□□□ 1.36
CCDC78-214ENST00000485091 TTC21AQ8NDW8 1320 aa23.56■■□□□ 1.36
CCDC78-214ENST00000485091 FAM9BQ8IZU0 186 aa23.56■■□□□ 1.36
CCDC78-214ENST00000485091 KIF1AQ12756 1690 aa23.55■■□□□ 1.36
CCDC78-214ENST00000485091 NUTM2GQ5VZR2 741 aa23.55■■□□□ 1.36
CCDC78-214ENST00000485091 TOM1O60784 492 aa23.54■■□□□ 1.36
CCDC78-214ENST00000485091 FBLN1P23142 703 aa23.54■■□□□ 1.36
CCDC78-214ENST00000485091 KRT28Q7Z3Y7 464 aa23.53■■□□□ 1.36
CCDC78-214ENST00000485091 BRINP3Q76B58 766 aa23.53■■□□□ 1.36
CCDC78-214ENST00000485091 ABTB2Q8N961 1025 aa23.53■■□□□ 1.36
CCDC78-214ENST00000485091 NLRP6P59044 892 aa23.51■■□□□ 1.35
CCDC78-214ENST00000485091 SOX12O15370 315 aa23.5■■□□□ 1.35
CCDC78-214ENST00000485091 MTHFSP49914 203 aa23.5■■□□□ 1.35
CCDC78-214ENST00000485091 LMOD2Q6P5Q4 547 aa23.5■■□□□ 1.35
CCDC78-214ENST00000485091 PIK3C2AO00443 1686 aa23.49■■□□□ 1.35
CCDC78-214ENST00000485091 PNISRQ8TF01 805 aaKnown RBP23.48■■□□□ 1.35
CCDC78-214ENST00000485091 SCAF1Q9H7N4 1312 aaKnown RBP23.48■■□□□ 1.35
CCDC78-214ENST00000485091 OVOS2A0A0J9YW53 1432 aa23.48■■□□□ 1.35
CCDC78-214ENST00000485091 OVOS2Q6IE36 1432 aa23.48■■□□□ 1.35
CCDC78-214ENST00000485091 PLEKHG5O94827 1062 aa23.47■■□□□ 1.35
CCDC78-214ENST00000485091 PIP4K2BP78356 416 aa23.47■■□□□ 1.35
CCDC78-214ENST00000485091 NPHP3Q7Z494 1330 aa23.47■■□□□ 1.35
CCDC78-214ENST00000485091 PPM1GO15355 546 aaPredicted RBP23.46■■□□□ 1.35
CCDC78-214ENST00000485091 USP31Q70CQ4 1352 aa23.45■■□□□ 1.34
CCDC78-214ENST00000485091 RRS1Q15050 365 aaKnown RBP23.45■■□□□ 1.34
CCDC78-214ENST00000485091 POLKQ9UBT6 870 aa23.43■■□□□ 1.34
CCDC78-214ENST00000485091 EMILIN1Q9Y6C2 1016 aa23.43■■□□□ 1.34
CCDC78-214ENST00000485091 TRPM3Q9HCF6 1732 aaPredicted RBP23.43■■□□□ 1.34
CCDC78-214ENST00000485091 CFAP53Q96M91 514 aa23.42■■□□□ 1.34
CCDC78-214ENST00000485091 WDR43Q15061 677 aaKnown RBP eCLIP23.4■■□□□ 1.34
CCDC78-214ENST00000485091 AATKQ6ZMQ8 1374 aa23.4■■□□□ 1.34
CCDC78-214ENST00000485091 MAP2P11137 1827 aaKnown RBP23.4■■□□□ 1.34
CCDC78-214ENST00000485091 PXDNQ92626 1479 aa23.39■■□□□ 1.33
CCDC78-214ENST00000485091 SBNO1A3KN83 1393 aa23.38■■□□□ 1.33
CCDC78-214ENST00000485091 MARF1Q9Y4F3 1742 aaKnown RBP23.38■■□□□ 1.33
CCDC78-214ENST00000485091 ADAMTS8Q9UP79 889 aa23.36■■□□□ 1.33
CCDC78-214ENST00000485091 ROBO1Q9Y6N7 1651 aa23.35■■□□□ 1.33
CCDC78-214ENST00000485091 SENP3-EIF4A1A0A087X0R7 540 aa23.35■■□□□ 1.33
CCDC78-214ENST00000485091 HNRNPUQ00839 825 aaKnown RBP eCLIP23.35■■□□□ 1.33
CCDC78-214ENST00000485091 TNS3Q68CZ2 1445 aa23.34■■□□□ 1.33
CCDC78-214ENST00000485091 USP54Q70EL1 1684 aa23.34■■□□□ 1.33
CCDC78-214ENST00000485091 ALS2Q96Q42 1657 aa23.34■■□□□ 1.33
CCDC78-214ENST00000485091 SOS2Q07890 1332 aaPredicted RBP23.34■■□□□ 1.33
CCDC78-214ENST00000485091 SPATA31A3Q5VYP0 1347 aa23.34■■□□□ 1.33
CCDC78-214ENST00000485091 ZBTB7CA1YPR0 619 aa23.33■■□□□ 1.33
CCDC78-214ENST00000485091 MAP3K19Q56UN5 1328 aa23.33■■□□□ 1.33
CCDC78-214ENST00000485091 SMG6Q86US8 1419 aaKnown RBP23.32■■□□□ 1.32
CCDC78-214ENST00000485091 NHSL1Q5SYE7 1610 aa23.31■■□□□ 1.32
CCDC78-214ENST00000485091 DIAPH1O60610 1272 aaKnown RBP23.31■■□□□ 1.32
CCDC78-214ENST00000485091 GCP02774 474 aa23.31■■□□□ 1.32
CCDC78-214ENST00000485091 KCNH5Q8NCM2 988 aa23.31■■□□□ 1.32
CCDC78-214ENST00000485091 U2SURPO15042 1029 aaKnown RBP23.3■■□□□ 1.32
CCDC78-214ENST00000485091 HSPA1LP34931 641 aa23.3■■□□□ 1.32
CCDC78-214ENST00000485091 AMPHP49418 695 aa23.3■■□□□ 1.32
CCDC78-214ENST00000485091 CABLES1Q8TDN4 633 aa23.3■■□□□ 1.32
CCDC78-214ENST00000485091 PNPLA6Q8IY17 1366 aa23.3■■□□□ 1.32
CCDC78-214ENST00000485091 COL3A1P02461 1466 aaPredicted RBP23.3■■□□□ 1.32
CCDC78-214ENST00000485091 SHPRHQ149N8 1683 aa23.3■■□□□ 1.32
CCDC78-214ENST00000485091 NUDCQ9Y266 331 aa23.29■■□□□ 1.32
CCDC78-214ENST00000485091 ARHGEF10O15013 1369 aa23.29■■□□□ 1.32
CCDC78-214ENST00000485091 CDK12Q9NYV4 1490 aaPredicted RBP23.29■■□□□ 1.32
CCDC78-214ENST00000485091 USP19O94966 1318 aa23.29■■□□□ 1.32
CCDC78-214ENST00000485091 PEAK1Q9H792 1746 aa23.28■■□□□ 1.32
CCDC78-214ENST00000485091 U2AF1L5P0DN76 240 aaPredicted RBP23.28■■□□□ 1.32
CCDC78-214ENST00000485091 U2AF1Q01081 240 aaKnown RBP eCLIP23.28■■□□□ 1.32
CCDC78-214ENST00000485091 HSP90AB2PQ58FF8 381 aa23.28■■□□□ 1.32
CCDC78-214ENST00000485091 SLIT3O75094 1523 aa23.27■■□□□ 1.32
CCDC78-214ENST00000485091 MED1Q15648 1581 aaPredicted RBP23.27■■□□□ 1.32
CCDC78-214ENST00000485091 INSRP06213 1382 aa23.26■■□□□ 1.31
CCDC78-214ENST00000485091 CCDC146Q8IYE0 955 aa23.26■■□□□ 1.31
CCDC78-214ENST00000485091 NFAT5O94916 1531 aa23.26■■□□□ 1.31
CCDC78-214ENST00000485091 ZC3H6P61129 1189 aaKnown RBP23.25■■□□□ 1.31
CCDC78-214ENST00000485091 FLT4P35916 1363 aa23.24■■□□□ 1.31
CCDC78-214ENST00000485091 IL13P35225 146 aa23.24■■□□□ 1.31
CCDC78-214ENST00000485091 HOXC9P31274 260 aa23.23■■□□□ 1.31
CCDC78-214ENST00000485091 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
CCDC78-214ENST00000485091 AHDC1Q5TGY3 1603 aaPredicted RBP23.23■■□□□ 1.31
CCDC78-214ENST00000485091 EIF4A2Q14240 407 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms