RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 DNMT3LQ9UJW3 386 aa10.41□□□□□ -0.74
VPS8-223ENST00000485024 VARSP26640 1264 aaKnown RBP10.4□□□□□ -0.74
VPS8-223ENST00000485024 COL25A1Q9BXS0 654 aaPredicted RBP10.4□□□□□ -0.74
VPS8-223ENST00000485024 ARHGEF15O94989 841 aa10.39□□□□□ -0.75
VPS8-223ENST00000485024 ZIC2O95409 532 aaPredicted RBP10.39□□□□□ -0.75
VPS8-223ENST00000485024 FOXK2Q01167 660 aa10.39□□□□□ -0.75
VPS8-223ENST00000485024 RNFT1Q5M7Z0 435 aa10.39□□□□□ -0.75
VPS8-223ENST00000485024 ZNF511Q8NB15 262 aa10.39□□□□□ -0.75
VPS8-223ENST00000485024 ITPKCQ96DU7 683 aa10.39□□□□□ -0.75
VPS8-223ENST00000485024 TESPA1A2RU30 521 aaPredicted RBP10.38□□□□□ -0.75
VPS8-223ENST00000485024 MS4A1P11836 297 aa10.38□□□□□ -0.75
VPS8-223ENST00000485024 TSHZ2Q9NRE2 1034 aa10.38□□□□□ -0.75
VPS8-223ENST00000485024 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.37□□□□□ -0.75
VPS8-223ENST00000485024 ADAM23O75077 832 aa10.37□□□□□ -0.75
VPS8-223ENST00000485024 SOS2Q07890 1332 aaPredicted RBP10.36□□□□□ -0.75
VPS8-223ENST00000485024 KANK3Q6NY19 840 aa10.36□□□□□ -0.75
VPS8-223ENST00000485024 EVA1BQ9NVM1 165 aa10.36□□□□□ -0.75
VPS8-223ENST00000485024 BMP2P12643 396 aa10.35□□□□□ -0.75
VPS8-223ENST00000485024 NR3C2P08235 984 aa10.34□□□□□ -0.75
VPS8-223ENST00000485024 PTPRNQ16849 979 aa10.34□□□□□ -0.75
VPS8-223ENST00000485024 LINC00528Q8N1L1 170 aa10.34□□□□□ -0.75
VPS8-223ENST00000485024 KRTAP9-2Q9BYQ4 174 aa10.34□□□□□ -0.75
VPS8-223ENST00000485024 SLURP2P0DP57 97 aa10.33□□□□□ -0.76
VPS8-223ENST00000485024 KCNH2Q12809 1159 aa10.32□□□□□ -0.76
VPS8-223ENST00000485024 P3H3Q8IVL6 736 aa10.32□□□□□ -0.76
VPS8-223ENST00000485024 MEIOBQ8N635 442 aa10.32□□□□□ -0.76
VPS8-223ENST00000485024 CDK15Q96Q40 435 aa10.32□□□□□ -0.76
VPS8-223ENST00000485024 PCDHGC3Q9UN70 934 aa10.32□□□□□ -0.76
VPS8-223ENST00000485024 NANOS1Q8WY41 292 aaKnown RBP10.31□□□□□ -0.76
VPS8-223ENST00000485024 MARSP56192 900 aaKnown RBP10.3□□□□□ -0.76
VPS8-223ENST00000485024 MDM2Q00987 491 aaPredicted RBP10.3□□□□□ -0.76
VPS8-223ENST00000485024 KRTAP9-6A0A140TA67 174 aa10.29□□□□□ -0.76
VPS8-223ENST00000485024 PTSQ03393 145 aa10.29□□□□□ -0.76
VPS8-223ENST00000485024 FAM174AQ8TBP5 190 aa10.29□□□□□ -0.76
VPS8-223ENST00000485024 C6orf229H3BNL8 230 aa10.28□□□□□ -0.76
VPS8-223ENST00000485024 ITGB2P05107 769 aa10.28□□□□□ -0.76
VPS8-223ENST00000485024 ARID5BQ14865 1188 aa10.28□□□□□ -0.76
VPS8-223ENST00000485024 UPP2O95045 317 aa10.27□□□□□ -0.77
VPS8-223ENST00000485024 SCARF2Q96GP6 870 aaPredicted RBP10.27□□□□□ -0.77
VPS8-223ENST00000485024 MSTNO14793 375 aa10.26□□□□□ -0.77
VPS8-223ENST00000485024 FDX1P10109 184 aa10.26□□□□□ -0.77
VPS8-223ENST00000485024 PLA2G4EQ3MJ16 856 aa10.26□□□□□ -0.77
VPS8-223ENST00000485024 SMYD5Q6GMV2 418 aa10.26□□□□□ -0.77
VPS8-223ENST00000485024 FOXJ1Q92949 421 aa10.26□□□□□ -0.77
VPS8-223ENST00000485024 PSMG3-AS1Q96PY0 264 aa10.26□□□□□ -0.77
VPS8-223ENST00000485024 SPOCK3Q9BQ16 436 aa10.26□□□□□ -0.77
VPS8-223ENST00000485024 GRM5P41594 1212 aa10.25□□□□□ -0.77
VPS8-223ENST00000485024 NR5A1Q13285 461 aa10.25□□□□□ -0.77
VPS8-223ENST00000485024 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.25□□□□□ -0.77
VPS8-223ENST00000485024 GPIHBP1Q8IV16 184 aa10.23□□□□□ -0.77
VPS8-223ENST00000485024 CCDC155Q8N6L0 562 aa10.23□□□□□ -0.77
VPS8-223ENST00000485024 TTLL8A6PVC2 850 aa10.21□□□□□ -0.77
VPS8-223ENST00000485024 PROCP04070 461 aa10.21□□□□□ -0.77
VPS8-223ENST00000485024 LYPD4Q6UWN0 246 aa10.21□□□□□ -0.77
VPS8-223ENST00000485024 NUTM1Q86Y26 1132 aa10.21□□□□□ -0.77
VPS8-223ENST00000485024 MAP2K5Q13163 448 aa10.2□□□□□ -0.78
VPS8-223ENST00000485024 C4orf48Q5BLP8 95 aa10.2□□□□□ -0.78
VPS8-223ENST00000485024 VWA5B2Q8N398 1253 aa10.2□□□□□ -0.78
VPS8-223ENST00000485024 PRR7Q8TB68 274 aa10.2□□□□□ -0.78
VPS8-223ENST00000485024 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
VPS8-223ENST00000485024 FIGNL2A6NMB9 653 aa10.19□□□□□ -0.78
VPS8-223ENST00000485024 SPTLC1O15269 473 aa10.19□□□□□ -0.78
VPS8-223ENST00000485024 DCAF5Q96JK2 942 aa10.19□□□□□ -0.78
VPS8-223ENST00000485024 Q8N3U1 123 aa10.18□□□□□ -0.78
VPS8-223ENST00000485024 TSEN34Q9BSV6 310 aaKnown RBP10.18□□□□□ -0.78
VPS8-223ENST00000485024 SLC35F4A4IF30 521 aa10.17□□□□□ -0.78
VPS8-223ENST00000485024 ADAMTS2O95450 1211 aa10.17□□□□□ -0.78
VPS8-223ENST00000485024 ITGA6P23229 1130 aa10.17□□□□□ -0.78
VPS8-223ENST00000485024 CDC14CA4D256 554 aa10.16□□□□□ -0.78
VPS8-223ENST00000485024 DESI1Q6ICB0 168 aa10.16□□□□□ -0.78
VPS8-223ENST00000485024 KRTAP1-3Q8IUG1 177 aa10.16□□□□□ -0.78
VPS8-223ENST00000485024 IRF6O14896 467 aa10.15□□□□□ -0.78
VPS8-223ENST00000485024 CTHP32929 405 aa10.15□□□□□ -0.78
VPS8-223ENST00000485024 NDUFV2P19404 249 aa10.14□□□□□ -0.79
VPS8-223ENST00000485024 SV2AQ7L0J3 742 aa10.14□□□□□ -0.79
VPS8-223ENST00000485024 GPCPD1Q9NPB8 672 aa10.14□□□□□ -0.79
VPS8-223ENST00000485024 CELA2BP08218 269 aaPredicted RBP10.13□□□□□ -0.79
VPS8-223ENST00000485024 FSHRP23945 695 aa10.13□□□□□ -0.79
VPS8-223ENST00000485024 CNTNAP5Q8WYK1 1306 aa10.12□□□□□ -0.79
VPS8-223ENST00000485024 K7ELQ4 463 aaPredicted RBP10.12□□□□□ -0.79
VPS8-223ENST00000485024 MAP10Q9P2G4 905 aa10.12□□□□□ -0.79
VPS8-223ENST00000485024 MAP3K10Q02779 954 aa10.11□□□□□ -0.79
VPS8-223ENST00000485024 LYPD8Q6UX82 237 aa10.1□□□□□ -0.79
VPS8-223ENST00000485024 GALNT6Q8NCL4 622 aa10.1□□□□□ -0.79
VPS8-223ENST00000485024 SPIRE2Q8WWL2 714 aa10.1□□□□□ -0.79
VPS8-223ENST00000485024 MOXD2PA6NHM9 499 aa10.09□□□□□ -0.79
VPS8-223ENST00000485024 SPINT1O43278 529 aa10.09□□□□□ -0.79
VPS8-223ENST00000485024 F12P00748 615 aaPredicted RBP10.09□□□□□ -0.79
VPS8-223ENST00000485024 CLCN1P35523 988 aa10.09□□□□□ -0.79
VPS8-223ENST00000485024 SRSF11Q05519 484 aaKnown RBP10.09□□□□□ -0.79
VPS8-223ENST00000485024 MTMR2Q13614 643 aa10.09□□□□□ -0.79
VPS8-223ENST00000485024 SH3RF1Q7Z6J0 888 aa10.09□□□□□ -0.79
VPS8-223ENST00000485024 GAS6Q14393 721 aa10.08□□□□□ -0.8
VPS8-223ENST00000485024 AGERQ15109 404 aa10.08□□□□□ -0.8
VPS8-223ENST00000485024 C1QTNF2Q9BXJ5 285 aa10.08□□□□□ -0.8
VPS8-223ENST00000485024 CCDC102AQ96A19 550 aa10.07□□□□□ -0.8
VPS8-223ENST00000485024 EMILIN1Q9Y6C2 1016 aa10.07□□□□□ -0.8
VPS8-223ENST00000485024 PHF20L1A8MW92 1017 aa10.06□□□□□ -0.8
VPS8-223ENST00000485024 CBLBQ13191 982 aa10.06□□□□□ -0.8
VPS8-223ENST00000485024 BPHLQ86WA6 291 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms