RNA–Protein interactions for RNA: ENST00000484268.1

ABCA13-206, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,340 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-206ENST00000484268 KIAA2012Q0VF49 1180 aa8.66□□□□□ -1.02
ABCA13-206ENST00000484268 PLCD3Q8N3E9 789 aa8.66□□□□□ -1.02
ABCA13-206ENST00000484268 LAMC1P11047 1609 aa8.66□□□□□ -1.02
ABCA13-206ENST00000484268 SYCE3A1L190 88 aa8.66□□□□□ -1.02
ABCA13-206ENST00000484268 HMGN5P82970 282 aaKnown RBP8.66□□□□□ -1.02
ABCA13-206ENST00000484268 NSFL1CQ9UNZ2 370 aaKnown RBP8.66□□□□□ -1.02
ABCA13-206ENST00000484268 MVPQ14764 893 aaKnown RBP8.65□□□□□ -1.02
ABCA13-206ENST00000484268 FOXD4L6Q3SYB3 417 aaPredicted RBP8.65□□□□□ -1.02
ABCA13-206ENST00000484268 FOXD4L3Q6VB84 417 aaPredicted RBP8.65□□□□□ -1.02
ABCA13-206ENST00000484268 EIF4G3O43432 1585 aaKnown RBP8.65□□□□□ -1.02
ABCA13-206ENST00000484268 TCP11L2Q8N4U5 519 aa8.65□□□□□ -1.02
ABCA13-206ENST00000484268 LMBRD1Q9NUN5 540 aa8.65□□□□□ -1.02
ABCA13-206ENST00000484268 SHROOM2Q13796 1616 aa8.65□□□□□ -1.02
ABCA13-206ENST00000484268 WDR7Q9Y4E6 1490 aa8.65□□□□□ -1.03
ABCA13-206ENST00000484268 BRD2P25440 801 aaKnown RBP8.65□□□□□ -1.03
ABCA13-206ENST00000484268 DZIP1LQ8IYY4 767 aaKnown RBP8.64□□□□□ -1.03
ABCA13-206ENST00000484268 GPT2Q8TD30 523 aa8.64□□□□□ -1.03
ABCA13-206ENST00000484268 DNAJC5Q9H3Z4 198 aa8.64□□□□□ -1.03
ABCA13-206ENST00000484268 ABCC10Q5T3U5 1492 aa8.63□□□□□ -1.03
ABCA13-206ENST00000484268 TSPY4P0CV99 314 aa8.63□□□□□ -1.03
ABCA13-206ENST00000484268 TSPY10P0CW01 314 aa8.63□□□□□ -1.03
ABCA13-206ENST00000484268 HDAC1Q13547 482 aaPredicted RBP8.63□□□□□ -1.03
ABCA13-206ENST00000484268 LRSAM1Q6UWE0 723 aa8.63□□□□□ -1.03
ABCA13-206ENST00000484268 C1orf115Q9H7X2 142 aa8.63□□□□□ -1.03
ABCA13-206ENST00000484268 SMC4Q9NTJ3 1288 aa8.63□□□□□ -1.03
ABCA13-206ENST00000484268 CGNQ9P2M7 1197 aaKnown RBP8.63□□□□□ -1.03
ABCA13-206ENST00000484268 KIF3AQ9Y496 699 aa8.63□□□□□ -1.03
ABCA13-206ENST00000484268 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.63□□□□□ -1.03
ABCA13-206ENST00000484268 A2MP01023 1474 aa8.63□□□□□ -1.03
ABCA13-206ENST00000484268 CFAP44Q96MT7 982 aa8.63□□□□□ -1.03
ABCA13-206ENST00000484268 PBRM1Q86U86 1689 aa8.63□□□□□ -1.03
ABCA13-206ENST00000484268 TMEM63CQ9P1W3 806 aa8.62□□□□□ -1.03
ABCA13-206ENST00000484268 GRIN2AQ12879 1464 aa8.62□□□□□ -1.03
ABCA13-206ENST00000484268 ASXL1Q8IXJ9 1541 aa8.62□□□□□ -1.03
ABCA13-206ENST00000484268 TRIM27P14373 513 aa8.62□□□□□ -1.03
ABCA13-206ENST00000484268 ZKSCAN2Q63HK3 967 aa8.62□□□□□ -1.03
ABCA13-206ENST00000484268 PDCL2Q8N4E4 241 aa8.62□□□□□ -1.03
ABCA13-206ENST00000484268 ZGPATQ8N5A5 531 aaKnown RBP8.62□□□□□ -1.03
ABCA13-206ENST00000484268 BCL2L12Q9HB09 334 aa8.62□□□□□ -1.03
ABCA13-206ENST00000484268 NPC1L1Q9UHC9 1359 aa8.62□□□□□ -1.03
ABCA13-206ENST00000484268 CROCC2H7BZ55 1655 aa8.61□□□□□ -1.03
ABCA13-206ENST00000484268 ITSN2Q9NZM3 1697 aa8.61□□□□□ -1.03
ABCA13-206ENST00000484268 CYP2E1P05181 493 aaPredicted RBP8.61□□□□□ -1.03
ABCA13-206ENST00000484268 NUCB2P80303 420 aa8.61□□□□□ -1.03
ABCA13-206ENST00000484268 ANKRD45Q5TZF3 282 aa8.61□□□□□ -1.03
ABCA13-206ENST00000484268 PIBF1Q8WXW3 757 aa8.61□□□□□ -1.03
ABCA13-206ENST00000484268 CARD14Q9BXL6 1004 aa8.61□□□□□ -1.03
ABCA13-206ENST00000484268 TBC1D9Q6ZT07 1266 aa8.61□□□□□ -1.03
ABCA13-206ENST00000484268 TMEM57Q8N5G2 664 aa8.61□□□□□ -1.03
ABCA13-206ENST00000484268 TTC12Q9H892 705 aaPredicted RBP8.61□□□□□ -1.03
ABCA13-206ENST00000484268 PTPRGP23470 1445 aa8.61□□□□□ -1.03
ABCA13-206ENST00000484268 CDK11BP21127 795 aaKnown RBP8.6□□□□□ -1.03
ABCA13-206ENST00000484268 U2AF2P26368 475 aaKnown RBP eCLIP8.6□□□□□ -1.03
ABCA13-206ENST00000484268 NOLC1Q14978 699 aaKnown RBP eCLIP8.6□□□□□ -1.03
ABCA13-206ENST00000484268 RSPH4AQ5TD94 716 aa8.6□□□□□ -1.03
ABCA13-206ENST00000484268 C9orf84Q5VXU9 1444 aa8.6□□□□□ -1.03
ABCA13-206ENST00000484268 ZNF771Q7L3S4 317 aaPredicted RBP8.6□□□□□ -1.03
ABCA13-206ENST00000484268 KIF16BQ96L93 1317 aa8.6□□□□□ -1.03
ABCA13-206ENST00000484268 GPATCH8Q9UKJ3 1502 aaKnown RBP8.6□□□□□ -1.03
ABCA13-206ENST00000484268 NUP153P49790 1475 aaKnown RBP8.6□□□□□ -1.03
ABCA13-206ENST00000484268 EXOSC9Q06265 439 aaKnown RBP8.6□□□□□ -1.03
ABCA13-206ENST00000484268 IRX5P78411 483 aaPredicted RBP8.59□□□□□ -1.03
ABCA13-206ENST00000484268 PLCB2Q00722 1185 aa8.59□□□□□ -1.03
ABCA13-206ENST00000484268 SSH1Q8WYL5 1049 aa8.59□□□□□ -1.03
ABCA13-206ENST00000484268 ANKRD7Q92527 254 aa8.59□□□□□ -1.03
ABCA13-206ENST00000484268 NOB1Q9ULX3 412 aaKnown RBP8.59□□□□□ -1.03
ABCA13-206ENST00000484268 FEZ1Q99689 392 aa8.59□□□□□ -1.03
ABCA13-206ENST00000484268 NOL8Q76FK4 1167 aaKnown RBP8.59□□□□□ -1.04
ABCA13-206ENST00000484268 SPTLC3Q9NUV7 552 aa8.59□□□□□ -1.04
ABCA13-206ENST00000484268 SYNMO15061 1565 aa8.58□□□□□ -1.04
ABCA13-206ENST00000484268 GABPB1Q06547 395 aaPredicted RBP8.58□□□□□ -1.04
ABCA13-206ENST00000484268 FKBP5Q13451 457 aaPredicted RBP8.58□□□□□ -1.04
ABCA13-206ENST00000484268 BMP2KLQ5H9B9 411 aa8.58□□□□□ -1.04
ABCA13-206ENST00000484268 CHD1LQ86WJ1 897 aa8.58□□□□□ -1.04
ABCA13-206ENST00000484268 GDPD2Q9HCC8 539 aa8.58□□□□□ -1.04
ABCA13-206ENST00000484268 OGFRQ9NZT2 677 aa8.58□□□□□ -1.04
ABCA13-206ENST00000484268 NUCB1Q02818 461 aa8.58□□□□□ -1.04
ABCA13-206ENST00000484268 SLC20A2Q08357 652 aa8.58□□□□□ -1.04
ABCA13-206ENST00000484268 PLA2R1Q13018 1463 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 EIF2AK4Q9P2K8 1649 aaKnown RBP8.57□□□□□ -1.04
ABCA13-206ENST00000484268 VGFO15240 615 aaPredicted RBP8.57□□□□□ -1.04
ABCA13-206ENST00000484268 WDR63Q8IWG1 891 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 RUNDC1Q96C34 613 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 NUP160Q12769 1436 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 CDCA8Q53HL2 280 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 ZDHHC9Q9Y397 364 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 IQGAP2Q13576 1575 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 APBB1O00213 710 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 HOXD11P31277 338 aaPredicted RBP8.57□□□□□ -1.04
ABCA13-206ENST00000484268 KCNJ4P48050 445 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 USP25Q9UHP3 1055 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 KANK1Q14678 1352 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 CCDC141Q6ZP82 1450 aa8.57□□□□□ -1.04
ABCA13-206ENST00000484268 U2AF1L5P0DN76 240 aaPredicted RBP8.56□□□□□ -1.04
ABCA13-206ENST00000484268 U2AF1Q01081 240 aaKnown RBP eCLIP8.56□□□□□ -1.04
ABCA13-206ENST00000484268 MORC1Q86VD1 984 aa8.56□□□□□ -1.04
ABCA13-206ENST00000484268 TSPY26PQ9H489 355 aa8.56□□□□□ -1.04
ABCA13-206ENST00000484268 ADCY10Q96PN6 1610 aa8.56□□□□□ -1.04
ABCA13-206ENST00000484268 CWC22Q9HCG8 908 aaKnown RBP8.56□□□□□ -1.04
ABCA13-206ENST00000484268 DDX19BQ9UMR2 479 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms