RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 AGLP35573 1532 aa13.54□□□□□ -0.24
COL8A1-207ENST00000483969 REREQ9P2R6 1566 aa13.54□□□□□ -0.24
COL8A1-207ENST00000483969 CDHR5Q9HBB8 845 aa13.53□□□□□ -0.24
COL8A1-207ENST00000483969 PTPN23Q9H3S7 1636 aa13.53□□□□□ -0.24
COL8A1-207ENST00000483969 FAM198AQ9UFP1 575 aa13.52□□□□□ -0.25
COL8A1-207ENST00000483969 DAPK1P53355 1430 aa13.52□□□□□ -0.25
COL8A1-207ENST00000483969 KIDINS220Q9ULH0 1771 aa13.51□□□□□ -0.25
COL8A1-207ENST00000483969 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
COL8A1-207ENST00000483969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.25
COL8A1-207ENST00000483969 TATDN2Q93075 761 aa13.51□□□□□ -0.25
COL8A1-207ENST00000483969 PNMA3Q9UL41 463 aa13.51□□□□□ -0.25
COL8A1-207ENST00000483969 ABCA6Q8N139 1617 aa13.5□□□□□ -0.25
COL8A1-207ENST00000483969 INO80Q9ULG1 1556 aaPredicted RBP13.5□□□□□ -0.25
COL8A1-207ENST00000483969 SMAPO00193 183 aa13.5□□□□□ -0.25
COL8A1-207ENST00000483969 ITGAEP38570 1179 aa13.5□□□□□ -0.25
COL8A1-207ENST00000483969 PPP4CP60510 307 aa13.5□□□□□ -0.25
COL8A1-207ENST00000483969 PTPRMP28827 1452 aa13.49□□□□□ -0.25
COL8A1-207ENST00000483969 SAMD7Q7Z3H4 446 aa13.49□□□□□ -0.25
COL8A1-207ENST00000483969 IRX2Q9BZI1 471 aaPredicted RBP13.49□□□□□ -0.25
COL8A1-207ENST00000483969 SHANK2Q9UPX8 1470 aa13.48□□□□□ -0.25
COL8A1-207ENST00000483969 KIF15Q9NS87 1388 aa13.48□□□□□ -0.25
COL8A1-207ENST00000483969 BCORL1Q5H9F3 1711 aa13.48□□□□□ -0.25
COL8A1-207ENST00000483969 CNTLNQ9NXG0 1405 aa13.47□□□□□ -0.25
COL8A1-207ENST00000483969 ADAMTSL3P82987 1691 aa13.47□□□□□ -0.25
COL8A1-207ENST00000483969 WASHC2CQ9Y4E1 1318 aa13.47□□□□□ -0.25
COL8A1-207ENST00000483969 MAST1Q9Y2H9 1570 aa13.47□□□□□ -0.25
COL8A1-207ENST00000483969 CEBPAP49715 358 aaPredicted RBP13.47□□□□□ -0.25
COL8A1-207ENST00000483969 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
COL8A1-207ENST00000483969 NCOA1Q15788 1441 aa13.46□□□□□ -0.26
COL8A1-207ENST00000483969 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
COL8A1-207ENST00000483969 ZMYM3Q14202 1370 aa13.45□□□□□ -0.26
COL8A1-207ENST00000483969 NUDT18Q6ZVK8 323 aa13.44□□□□□ -0.26
COL8A1-207ENST00000483969 DUOX2Q9NRD8 1548 aa13.44□□□□□ -0.26
COL8A1-207ENST00000483969 DNMT1P26358 1616 aaKnown RBP13.43□□□□□ -0.26
COL8A1-207ENST00000483969 C3orf80F5H4A9 247 aa13.43□□□□□ -0.26
COL8A1-207ENST00000483969 PLXNC1O60486 1568 aa13.43□□□□□ -0.26
COL8A1-207ENST00000483969 HDGFP51858 240 aaKnown RBP13.43□□□□□ -0.26
COL8A1-207ENST00000483969 TTC13Q8NBP0 860 aa13.43□□□□□ -0.26
COL8A1-207ENST00000483969 ROCK1Q13464 1354 aa13.43□□□□□ -0.26
COL8A1-207ENST00000483969 MADDQ8WXG6 1647 aa13.42□□□□□ -0.26
COL8A1-207ENST00000483969 NECTIN2Q92692 538 aa13.42□□□□□ -0.26
COL8A1-207ENST00000483969 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
COL8A1-207ENST00000483969 ADGBQ8N7X0 1667 aa13.42□□□□□ -0.26
COL8A1-207ENST00000483969 ADGRL2O95490 1459 aa13.42□□□□□ -0.26
COL8A1-207ENST00000483969 SIGLEC1Q9BZZ2 1709 aa13.42□□□□□ -0.26
COL8A1-207ENST00000483969 PTPRKQ15262 1439 aa13.41□□□□□ -0.26
COL8A1-207ENST00000483969 ERBINQ96RT1 1412 aa13.41□□□□□ -0.26
COL8A1-207ENST00000483969 PADI6Q6TGC4 694 aa13.41□□□□□ -0.26
COL8A1-207ENST00000483969 KCNV2Q8TDN2 545 aa13.4□□□□□ -0.26
COL8A1-207ENST00000483969 NPDC1Q9NQX5 325 aaPredicted RBP13.4□□□□□ -0.26
COL8A1-207ENST00000483969 KANK1Q14678 1352 aa13.4□□□□□ -0.26
COL8A1-207ENST00000483969 RNF40O75150 1001 aa13.39□□□□□ -0.27
COL8A1-207ENST00000483969 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
COL8A1-207ENST00000483969 RIMS1Q86UR5 1692 aaKnown RBP13.37□□□□□ -0.27
COL8A1-207ENST00000483969 TJAP1Q5JTD0 557 aa13.36□□□□□ -0.27
COL8A1-207ENST00000483969 IL21Q9HBE4 155 aa13.36□□□□□ -0.27
COL8A1-207ENST00000483969 SLC4A3P48751 1232 aa13.35□□□□□ -0.27
COL8A1-207ENST00000483969 SLF2Q8IX21 1173 aa13.35□□□□□ -0.27
COL8A1-207ENST00000483969 MTRQ99707 1265 aa13.35□□□□□ -0.27
COL8A1-207ENST00000483969 NPATQ14207 1427 aa13.35□□□□□ -0.27
COL8A1-207ENST00000483969 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
COL8A1-207ENST00000483969 MLLT3P42568 568 aaPredicted RBP13.34□□□□□ -0.27
COL8A1-207ENST00000483969 FBXO31Q5XUX0 539 aaPredicted RBP13.34□□□□□ -0.27
COL8A1-207ENST00000483969 KDM5DQ9BY66 1539 aa13.33□□□□□ -0.28
COL8A1-207ENST00000483969 FER1L4A9Z1Z3 1794 aa13.32□□□□□ -0.28
COL8A1-207ENST00000483969 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
COL8A1-207ENST00000483969 UHRF1BP1Q6BDS2 1440 aa13.32□□□□□ -0.28
COL8A1-207ENST00000483969 CROCC2H7BZ55 1655 aa13.32□□□□□ -0.28
COL8A1-207ENST00000483969 HSPA2P54652 639 aa13.31□□□□□ -0.28
COL8A1-207ENST00000483969 SWT1Q5T5J6 900 aaKnown RBP13.31□□□□□ -0.28
COL8A1-207ENST00000483969 APLP1P51693 650 aa13.3□□□□□ -0.28
COL8A1-207ENST00000483969 NUP155O75694 1391 aa13.3□□□□□ -0.28
COL8A1-207ENST00000483969 TNRQ92752 1358 aa13.3□□□□□ -0.28
COL8A1-207ENST00000483969 EYA1Q99502 592 aa13.29□□□□□ -0.28
COL8A1-207ENST00000483969 ACIN1Q9UKV3 1341 aaKnown RBP13.29□□□□□ -0.28
COL8A1-207ENST00000483969 PZPP20742 1482 aa13.29□□□□□ -0.28
COL8A1-207ENST00000483969 ABCC3O15438 1527 aa13.29□□□□□ -0.28
COL8A1-207ENST00000483969 RNF17Q9BXT8 1623 aaKnown RBP13.28□□□□□ -0.28
COL8A1-207ENST00000483969 PTGDRQ13258 359 aa13.28□□□□□ -0.28
COL8A1-207ENST00000483969 TRIM52Q96A61 297 aa13.28□□□□□ -0.28
COL8A1-207ENST00000483969 ARHGAP31Q2M1Z3 1444 aa13.28□□□□□ -0.28
COL8A1-207ENST00000483969 THEMISQ8N1K5 641 aaPredicted RBP13.27□□□□□ -0.29
COL8A1-207ENST00000483969 PRR14Q9BWN1 585 aa13.27□□□□□ -0.29
COL8A1-207ENST00000483969 NAIPQ13075 1403 aa13.27□□□□□ -0.29
COL8A1-207ENST00000483969 LMTK3Q96Q04 1460 aa13.27□□□□□ -0.29
COL8A1-207ENST00000483969 MROH2AA6NES4 1674 aa13.27□□□□□ -0.29
COL8A1-207ENST00000483969 CLTCQ00610 1675 aaKnown RBP13.27□□□□□ -0.29
COL8A1-207ENST00000483969 HFM1A2PYH4 1435 aa13.26□□□□□ -0.29
COL8A1-207ENST00000483969 PRDM15P57071 1507 aaPredicted RBP13.25□□□□□ -0.29
COL8A1-207ENST00000483969 C3P01024 1663 aa13.24□□□□□ -0.29
COL8A1-207ENST00000483969 LMTK2Q8IWU2 1503 aa13.24□□□□□ -0.29
COL8A1-207ENST00000483969 SLC52A1Q9NWF4 448 aa13.24□□□□□ -0.29
COL8A1-207ENST00000483969 MROH1Q8NDA8 1641 aa13.24□□□□□ -0.29
COL8A1-207ENST00000483969 DNAJB2P25686 324 aa13.23□□□□□ -0.29
COL8A1-207ENST00000483969 LAPTM4AQ15012 233 aa13.23□□□□□ -0.29
COL8A1-207ENST00000483969 RBM46Q8TBY0 533 aaKnown RBP13.23□□□□□ -0.29
COL8A1-207ENST00000483969 NLRP1Q9C000 1473 aa13.22□□□□□ -0.29
COL8A1-207ENST00000483969 VWDEQ8N2E2 1590 aa13.21□□□□□ -0.29
COL8A1-207ENST00000483969 IDI1Q13907 227 aa13.21□□□□□ -0.29
COL8A1-207ENST00000483969 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms