RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 ROCK2O75116 1388 aaKnown RBP17.4■□□□□ 0.38
HDLBP-239ENST00000483086 NGDNQ8NEJ9 315 aaKnown RBP17.39■□□□□ 0.37
HDLBP-239ENST00000483086 UPF1Q92900 1129 aaKnown RBP eCLIP17.39■□□□□ 0.37
HDLBP-239ENST00000483086 TRPC5Q9UL62 973 aaPredicted RBP17.39■□□□□ 0.37
HDLBP-239ENST00000483086 ACEP12821 1306 aa17.39■□□□□ 0.37
HDLBP-239ENST00000483086 FAM83GA6ND36 823 aa17.38■□□□□ 0.37
HDLBP-239ENST00000483086 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
HDLBP-239ENST00000483086 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
HDLBP-239ENST00000483086 PLEKHG3A1L390 1219 aa17.37■□□□□ 0.37
HDLBP-239ENST00000483086 CCDC61Q9Y6R9 512 aa17.37■□□□□ 0.37
HDLBP-239ENST00000483086 COL14A1Q05707 1796 aaKnown RBP17.37■□□□□ 0.37
HDLBP-239ENST00000483086 AKAP12Q02952 1782 aa17.36■□□□□ 0.37
HDLBP-239ENST00000483086 UNC5CLQ8IV45 518 aa17.36■□□□□ 0.37
HDLBP-239ENST00000483086 PAK3O75914 559 aaPredicted RBP17.35■□□□□ 0.37
HDLBP-239ENST00000483086 NRKQ7Z2Y5 1582 aa17.35■□□□□ 0.37
HDLBP-239ENST00000483086 SRPK2P78362 688 aaKnown RBP17.34■□□□□ 0.37
HDLBP-239ENST00000483086 NUTM2GQ5VZR2 741 aa17.34■□□□□ 0.37
HDLBP-239ENST00000483086 GJD4Q96KN9 370 aaPredicted RBP17.34■□□□□ 0.37
HDLBP-239ENST00000483086 PIK3C2AO00443 1686 aa17.33■□□□□ 0.37
HDLBP-239ENST00000483086 TONSLQ96HA7 1378 aa17.32■□□□□ 0.36
HDLBP-239ENST00000483086 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
HDLBP-239ENST00000483086 SSH2Q76I76 1423 aa17.31■□□□□ 0.36
HDLBP-239ENST00000483086 CABP1Q9NZU7 370 aa17.31■□□□□ 0.36
HDLBP-239ENST00000483086 MON2Q7Z3U7 1717 aa17.3■□□□□ 0.36
HDLBP-239ENST00000483086 USP6P35125 1406 aa17.3■□□□□ 0.36
HDLBP-239ENST00000483086 LMO7Q8WWI1 1683 aa17.29■□□□□ 0.36
HDLBP-239ENST00000483086 KIAA0232Q92628 1395 aa17.28■□□□□ 0.36
HDLBP-239ENST00000483086 VPS72Q15906 364 aa17.28■□□□□ 0.36
HDLBP-239ENST00000483086 CARD11Q9BXL7 1154 aa17.28■□□□□ 0.36
HDLBP-239ENST00000483086 BTG4Q9NY30 223 aa17.28■□□□□ 0.36
HDLBP-239ENST00000483086 USP19O94966 1318 aa17.27■□□□□ 0.36
HDLBP-239ENST00000483086 CHRNA2Q15822 529 aa17.27■□□□□ 0.36
HDLBP-239ENST00000483086 SBNO2Q9Y2G9 1366 aa17.27■□□□□ 0.35
HDLBP-239ENST00000483086 EVC2Q86UK5 1308 aa17.26■□□□□ 0.35
HDLBP-239ENST00000483086 CD163L1Q9NR16 1453 aa17.26■□□□□ 0.35
HDLBP-239ENST00000483086 CAMTA1Q9Y6Y1 1673 aa17.26■□□□□ 0.35
HDLBP-239ENST00000483086 ZC3H6P61129 1189 aaKnown RBP17.25■□□□□ 0.35
HDLBP-239ENST00000483086 THSD7AQ9UPZ6 1657 aa17.25■□□□□ 0.35
HDLBP-239ENST00000483086 SLIT3O75094 1523 aa17.25■□□□□ 0.35
HDLBP-239ENST00000483086 COL18A1P39060 1754 aa17.25■□□□□ 0.35
HDLBP-239ENST00000483086 CPSF1Q10570 1443 aaKnown RBP17.24■□□□□ 0.35
HDLBP-239ENST00000483086 ONECUT3O60422 494 aaPredicted RBP17.24■□□□□ 0.35
HDLBP-239ENST00000483086 ABTB2Q8N961 1025 aa17.24■□□□□ 0.35
HDLBP-239ENST00000483086 RGPD5Q99666 1765 aa17.24■□□□□ 0.35
HDLBP-239ENST00000483086 SRCAPQ6ZRS2 3230 aa17.24■□□□□ 0.35
HDLBP-239ENST00000483086 ATAD2Q6PL18 1390 aa17.23■□□□□ 0.35
HDLBP-239ENST00000483086 SEPT12Q8IYM1 358 aa17.22■□□□□ 0.35
HDLBP-239ENST00000483086 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
HDLBP-239ENST00000483086 TESK2Q96S53 571 aa17.21■□□□□ 0.35
HDLBP-239ENST00000483086 SPATA31A5Q5VU36 1347 aa17.21■□□□□ 0.34
HDLBP-239ENST00000483086 SPATA31A7Q8IWB4 1347 aa17.21■□□□□ 0.34
HDLBP-239ENST00000483086 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
HDLBP-239ENST00000483086 PCGF6Q9BYE7 350 aa17.2■□□□□ 0.34
HDLBP-239ENST00000483086 CCDC9Q9Y3X0 531 aaKnown RBP17.2■□□□□ 0.34
HDLBP-239ENST00000483086 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
HDLBP-239ENST00000483086 CPDO75976 1380 aa17.19■□□□□ 0.34
HDLBP-239ENST00000483086 GCP02774 474 aa17.19■□□□□ 0.34
HDLBP-239ENST00000483086 FAM98CQ17RN3 349 aaKnown RBP17.19■□□□□ 0.34
HDLBP-239ENST00000483086 TTC21BQ7Z4L5 1316 aa17.19■□□□□ 0.34
HDLBP-239ENST00000483086 ST20-MTHFSA0A0A6YYL1 179 aa17.18■□□□□ 0.34
HDLBP-239ENST00000483086 ZRANB1Q9UGI0 708 aa17.18■□□□□ 0.34
HDLBP-239ENST00000483086 NFAT5O94916 1531 aa17.17■□□□□ 0.34
HDLBP-239ENST00000483086 SPATA31A1Q5TZJ5 1347 aa17.17■□□□□ 0.34
HDLBP-239ENST00000483086 NLRP6P59044 892 aa17.16■□□□□ 0.34
HDLBP-239ENST00000483086 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
HDLBP-239ENST00000483086 SLC12A5Q9H2X9 1139 aa17.16■□□□□ 0.34
HDLBP-239ENST00000483086 STRN4Q9NRL3 753 aa17.16■□□□□ 0.34
HDLBP-239ENST00000483086 COL5A2P05997 1499 aaPredicted RBP17.16■□□□□ 0.34
HDLBP-239ENST00000483086 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
HDLBP-239ENST00000483086 WNK3Q9BYP7 1800 aa17.15■□□□□ 0.34
HDLBP-239ENST00000483086 FAM182BQ5T319 152 aa17.15■□□□□ 0.34
HDLBP-239ENST00000483086 LARP1Q6PKG0 1096 aaKnown RBP17.14■□□□□ 0.33
HDLBP-239ENST00000483086 LTN1O94822 1766 aa17.14■□□□□ 0.33
HDLBP-239ENST00000483086 TNS1Q9HBL0 1735 aaKnown RBP17.13■□□□□ 0.33
HDLBP-239ENST00000483086 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
HDLBP-239ENST00000483086 A0A1W2PP64 1363 aa17.13■□□□□ 0.33
HDLBP-239ENST00000483086 KRT27Q7Z3Y8 459 aa17.12■□□□□ 0.33
HDLBP-239ENST00000483086 AXIN2Q9Y2T1 843 aa17.12■□□□□ 0.33
HDLBP-239ENST00000483086 USP47Q96K76 1375 aa17.12■□□□□ 0.33
HDLBP-239ENST00000483086 MYOM1P52179 1685 aa17.11■□□□□ 0.33
HDLBP-239ENST00000483086 PARP4Q9UKK3 1724 aaKnown RBP17.11■□□□□ 0.33
HDLBP-239ENST00000483086 NME9Q86XW9 330 aa17.11■□□□□ 0.33
HDLBP-239ENST00000483086 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.1■□□□□ 0.33
HDLBP-239ENST00000483086 TMC1Q8TDI8 760 aa17.1■□□□□ 0.33
HDLBP-239ENST00000483086 USP35Q9P2H5 1018 aa17.1■□□□□ 0.33
HDLBP-239ENST00000483086 TTC21AQ8NDW8 1320 aa17.1■□□□□ 0.33
HDLBP-239ENST00000483086 AATKQ6ZMQ8 1374 aa17.1■□□□□ 0.33
HDLBP-239ENST00000483086 BLMP54132 1417 aaPredicted RBP17.1■□□□□ 0.33
HDLBP-239ENST00000483086 A0A0G2JS52 829 aa17.09■□□□□ 0.33
HDLBP-239ENST00000483086 ZBTB7CA1YPR0 619 aa17.09■□□□□ 0.33
HDLBP-239ENST00000483086 SOX12O15370 315 aa17.09■□□□□ 0.33
HDLBP-239ENST00000483086 MYT1Q01538 1121 aa17.09■□□□□ 0.33
HDLBP-239ENST00000483086 DEFB132Q7Z7B7 95 aa17.09■□□□□ 0.33
HDLBP-239ENST00000483086 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
HDLBP-239ENST00000483086 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
HDLBP-239ENST00000483086 LRRC37A3O60309 1634 aa17.08■□□□□ 0.32
HDLBP-239ENST00000483086 ARHGEF25Q86VW2 580 aa17.08■□□□□ 0.32
HDLBP-239ENST00000483086 OVOS2A0A0J9YW53 1432 aa17.07■□□□□ 0.32
HDLBP-239ENST00000483086 OVOS2Q6IE36 1432 aa17.07■□□□□ 0.32
HDLBP-239ENST00000483086 EDC4Q6P2E9 1401 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 257.3 ms