RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PRDM11Q9NQV5 511 aa10.88□□□□□ -0.67
CSDE1-206ENST00000483030 SPATA31A5Q5VU36 1347 aa10.87□□□□□ -0.67
CSDE1-206ENST00000483030 SPATA31A7Q8IWB4 1347 aa10.87□□□□□ -0.67
CSDE1-206ENST00000483030 BRWD3Q6RI45 1802 aa10.87□□□□□ -0.67
CSDE1-206ENST00000483030 DCAF11Q8TEB1 546 aa10.87□□□□□ -0.67
CSDE1-206ENST00000483030 RGPD8O14715 1765 aaPredicted RBP10.86□□□□□ -0.67
CSDE1-206ENST00000483030 DLC1Q96QB1 1528 aa10.86□□□□□ -0.67
CSDE1-206ENST00000483030 R3HDM1Q15032 1099 aaKnown RBP10.86□□□□□ -0.67
CSDE1-206ENST00000483030 CHRNA2Q15822 529 aa10.85□□□□□ -0.67
CSDE1-206ENST00000483030 NUTM2GQ5VZR2 741 aa10.85□□□□□ -0.67
CSDE1-206ENST00000483030 EIF3AQ14152 1382 aaKnown RBP10.85□□□□□ -0.67
CSDE1-206ENST00000483030 NWD2Q9ULI1 1742 aa10.84□□□□□ -0.67
CSDE1-206ENST00000483030 TRIM37O94972 964 aa10.84□□□□□ -0.67
CSDE1-206ENST00000483030 ZC3H6P61129 1189 aaKnown RBP10.84□□□□□ -0.67
CSDE1-206ENST00000483030 EZH2Q15910 746 aaKnown RBP10.84□□□□□ -0.67
CSDE1-206ENST00000483030 NUDT16Q96DE0 195 aaKnown RBP10.84□□□□□ -0.67
CSDE1-206ENST00000483030 STRN4Q9NRL3 753 aa10.84□□□□□ -0.67
CSDE1-206ENST00000483030 PLCH1Q4KWH8 1693 aa10.84□□□□□ -0.67
CSDE1-206ENST00000483030 SPATA31A1Q5TZJ5 1347 aa10.84□□□□□ -0.67
CSDE1-206ENST00000483030 ADGRB1O14514 1584 aa10.83□□□□□ -0.68
CSDE1-206ENST00000483030 KIAA0232Q92628 1395 aa10.83□□□□□ -0.68
CSDE1-206ENST00000483030 RAB3GAP2Q9H2M9 1393 aa10.83□□□□□ -0.68
CSDE1-206ENST00000483030 FAM196AQ6ZSG2 479 aa10.83□□□□□ -0.68
CSDE1-206ENST00000483030 USP35Q9P2H5 1018 aa10.83□□□□□ -0.68
CSDE1-206ENST00000483030 EVA1CP58658 441 aa10.82□□□□□ -0.68
CSDE1-206ENST00000483030 STAC3Q96MF2 364 aa10.82□□□□□ -0.68
CSDE1-206ENST00000483030 CAMKK2Q96RR4 588 aa10.82□□□□□ -0.68
CSDE1-206ENST00000483030 CDK19Q9BWU1 502 aa10.82□□□□□ -0.68
CSDE1-206ENST00000483030 ADGRB2O60241 1585 aa10.82□□□□□ -0.68
CSDE1-206ENST00000483030 TULP4Q9NRJ4 1543 aa10.81□□□□□ -0.68
CSDE1-206ENST00000483030 APBA3O96018 575 aa10.81□□□□□ -0.68
CSDE1-206ENST00000483030 NBPF8Q3BBV2 869 aa10.81□□□□□ -0.68
CSDE1-206ENST00000483030 RNF39Q9H2S5 420 aa10.81□□□□□ -0.68
CSDE1-206ENST00000483030 ABCA3Q99758 1704 aa10.81□□□□□ -0.68
CSDE1-206ENST00000483030 TRPM3Q9HCF6 1732 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-206ENST00000483030 COL14A1Q05707 1796 aaKnown RBP10.8□□□□□ -0.68
CSDE1-206ENST00000483030 PDE3BQ13370 1112 aa10.8□□□□□ -0.68
CSDE1-206ENST00000483030 NRAPQ86VF7 1730 aa10.8□□□□□ -0.68
CSDE1-206ENST00000483030 ACEP12821 1306 aa10.8□□□□□ -0.68
CSDE1-206ENST00000483030 LRP5O75197 1615 aa10.8□□□□□ -0.68
CSDE1-206ENST00000483030 DISP2A7MBM2 1401 aa10.79□□□□□ -0.68
CSDE1-206ENST00000483030 LARP1Q6PKG0 1096 aaKnown RBP10.79□□□□□ -0.68
CSDE1-206ENST00000483030 ABTB2Q8N961 1025 aa10.79□□□□□ -0.68
CSDE1-206ENST00000483030 CCDC61Q9Y6R9 512 aa10.79□□□□□ -0.68
CSDE1-206ENST00000483030 ALS2Q96Q42 1657 aa10.79□□□□□ -0.68
CSDE1-206ENST00000483030 PLEKHG3A1L390 1219 aa10.78□□□□□ -0.68
CSDE1-206ENST00000483030 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
CSDE1-206ENST00000483030 BARGINQ6ZT62 677 aa10.78□□□□□ -0.68
CSDE1-206ENST00000483030 ATP7BP35670 1465 aa10.77□□□□□ -0.69
CSDE1-206ENST00000483030 TCP11L2Q8N4U5 519 aa10.77□□□□□ -0.69
CSDE1-206ENST00000483030 NBPF14Q5TI25 921 aa10.76□□□□□ -0.69
CSDE1-206ENST00000483030 POLR3AO14802 1390 aaPredicted RBP10.76□□□□□ -0.69
CSDE1-206ENST00000483030 THSD7AQ9UPZ6 1657 aa10.76□□□□□ -0.69
CSDE1-206ENST00000483030 SSH2Q76I76 1423 aa10.75□□□□□ -0.69
CSDE1-206ENST00000483030 GCP02774 474 aa10.75□□□□□ -0.69
CSDE1-206ENST00000483030 NBPF1Q3BBV0 1214 aa10.75□□□□□ -0.69
CSDE1-206ENST00000483030 NLRP13Q86W25 1043 aa10.75□□□□□ -0.69
CSDE1-206ENST00000483030 PARD3Q8TEW0 1356 aa10.75□□□□□ -0.69
CSDE1-206ENST00000483030 ZBTB7CA1YPR0 619 aa10.74□□□□□ -0.69
CSDE1-206ENST00000483030 SRPK2P78362 688 aaKnown RBP10.74□□□□□ -0.69
CSDE1-206ENST00000483030 RGPD1P0DJD0 1748 aa10.74□□□□□ -0.69
CSDE1-206ENST00000483030 CABP2Q9NPB3 220 aa10.73□□□□□ -0.69
CSDE1-206ENST00000483030 THRAP3Q9Y2W1 955 aaKnown RBP10.73□□□□□ -0.69
CSDE1-206ENST00000483030 USP19O94966 1318 aa10.73□□□□□ -0.69
CSDE1-206ENST00000483030 CPDO75976 1380 aa10.73□□□□□ -0.69
CSDE1-206ENST00000483030 CAMTA1Q9Y6Y1 1673 aa10.73□□□□□ -0.69
CSDE1-206ENST00000483030 CRYBG1Q9Y4K1 1723 aa10.72□□□□□ -0.69
CSDE1-206ENST00000483030 NLRP6P59044 892 aa10.71□□□□□ -0.69
CSDE1-206ENST00000483030 SPON1Q9HCB6 807 aa10.71□□□□□ -0.69
CSDE1-206ENST00000483030 PPP1R1BQ9UD71 204 aaPredicted RBP10.71□□□□□ -0.69
CSDE1-206ENST00000483030 TNS1Q9HBL0 1735 aaKnown RBP10.7□□□□□ -0.7
CSDE1-206ENST00000483030 C11orf95C9JLR9 678 aaPredicted RBP10.7□□□□□ -0.7
CSDE1-206ENST00000483030 KCNQ2O43526 872 aa10.7□□□□□ -0.7
CSDE1-206ENST00000483030 YY1P25490 414 aa10.7□□□□□ -0.7
CSDE1-206ENST00000483030 CABP1Q9NZU7 370 aa10.7□□□□□ -0.7
CSDE1-206ENST00000483030 PPIP5K1Q6PFW1 1433 aa10.69□□□□□ -0.7
CSDE1-206ENST00000483030 CENPJQ9HC77 1338 aaPredicted RBP10.69□□□□□ -0.7
CSDE1-206ENST00000483030 DDB1Q16531 1140 aa10.69□□□□□ -0.7
CSDE1-206ENST00000483030 TOM1L2Q6ZVM7 507 aa10.69□□□□□ -0.7
CSDE1-206ENST00000483030 ARHGEF28Q8N1W1 1705 aaKnown RBP10.68□□□□□ -0.7
CSDE1-206ENST00000483030 PTF1AQ7RTS3 328 aa10.68□□□□□ -0.7
CSDE1-206ENST00000483030 PHRF1Q9P1Y6 1649 aaKnown RBP10.68□□□□□ -0.7
CSDE1-206ENST00000483030 COL5A2P05997 1499 aaPredicted RBP10.68□□□□□ -0.7
CSDE1-206ENST00000483030 CRB1P82279 1406 aa10.67□□□□□ -0.7
CSDE1-206ENST00000483030 ITSN1Q15811 1721 aa10.67□□□□□ -0.7
CSDE1-206ENST00000483030 AATKQ6ZMQ8 1374 aa10.67□□□□□ -0.7
CSDE1-206ENST00000483030 DCAF8L1A6NGE4 600 aa10.67□□□□□ -0.7
CSDE1-206ENST00000483030 PLSCR1O15162 318 aa10.67□□□□□ -0.7
CSDE1-206ENST00000483030 AXIN2Q9Y2T1 843 aa10.67□□□□□ -0.7
CSDE1-206ENST00000483030 BRD4O60885 1362 aaPredicted RBP10.66□□□□□ -0.7
CSDE1-206ENST00000483030 NRKQ7Z2Y5 1582 aa10.66□□□□□ -0.7
CSDE1-206ENST00000483030 PROM2Q8N271 834 aa10.66□□□□□ -0.7
CSDE1-206ENST00000483030 MARCH10Q8NA82 808 aaPredicted RBP10.66□□□□□ -0.7
CSDE1-206ENST00000483030 BCL11BQ9C0K0 894 aaPredicted RBP10.66□□□□□ -0.7
CSDE1-206ENST00000483030 OVOS2A0A0G2JMS6 1433 aa10.66□□□□□ -0.7
CSDE1-206ENST00000483030 OVOS2A0A0J9YW53 1432 aa10.66□□□□□ -0.7
CSDE1-206ENST00000483030 OVOS2Q6IE36 1432 aa10.66□□□□□ -0.7
CSDE1-206ENST00000483030 PDGFDQ9GZP0 370 aaPredicted RBP10.65□□□□□ -0.7
CSDE1-206ENST00000483030 ANO8Q9HCE9 1232 aaPredicted RBP10.65□□□□□ -0.7
CSDE1-206ENST00000483030 LMO7Q8WWI1 1683 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms