RNA–Protein interactions for RNA: ENST00000482396.5

SFMBT1-204, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 2

Gene SFMBT1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-204ENST00000482396 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.17■■■□□ 2.1
SFMBT1-204ENST00000482396 SLIT2O94813 1529 aa28.16■■■□□ 2.1
SFMBT1-204ENST00000482396 PLEKHG5O94827 1062 aa28.15■■■□□ 2.1
SFMBT1-204ENST00000482396 QTRT2Q9H974 415 aaKnown RBP28.15■■■□□ 2.1
SFMBT1-204ENST00000482396 PLCH1Q4KWH8 1693 aa28.15■■■□□ 2.1
SFMBT1-204ENST00000482396 PHRF1Q9P1Y6 1649 aaKnown RBP28.14■■■□□ 2.1
SFMBT1-204ENST00000482396 PAK3O75914 559 aaPredicted RBP28.14■■■□□ 2.1
SFMBT1-204ENST00000482396 CCER1Q8TC90 406 aaPredicted RBP28.14■■■□□ 2.1
SFMBT1-204ENST00000482396 USP21Q9UK80 565 aa28.14■■■□□ 2.1
SFMBT1-204ENST00000482396 TESK2Q96S53 571 aa28.13■■■□□ 2.09
SFMBT1-204ENST00000482396 ATRNO75882 1429 aa28.12■■■□□ 2.09
SFMBT1-204ENST00000482396 SSH2Q76I76 1423 aa28.11■■■□□ 2.09
SFMBT1-204ENST00000482396 ST20-MTHFSA0A0A6YYL1 179 aa28.11■■■□□ 2.09
SFMBT1-204ENST00000482396 RXRBP28702 533 aa28.11■■■□□ 2.09
SFMBT1-204ENST00000482396 NWD2Q9ULI1 1742 aa28.11■■■□□ 2.09
SFMBT1-204ENST00000482396 USP6P35125 1406 aa28.1■■■□□ 2.09
SFMBT1-204ENST00000482396 CDK12Q9NYV4 1490 aaPredicted RBP28.09■■■□□ 2.09
SFMBT1-204ENST00000482396 ATAD2Q6PL18 1390 aa28.08■■■□□ 2.09
SFMBT1-204ENST00000482396 MON2Q7Z3U7 1717 aa28.07■■■□□ 2.08
SFMBT1-204ENST00000482396 FAM83GA6ND36 823 aa28.07■■■□□ 2.08
SFMBT1-204ENST00000482396 RBM6P78332 1123 aaKnown RBP28.07■■■□□ 2.08
SFMBT1-204ENST00000482396 CPSF1Q10570 1443 aaKnown RBP28.07■■■□□ 2.08
SFMBT1-204ENST00000482396 NRKQ7Z2Y5 1582 aa28.07■■■□□ 2.08
SFMBT1-204ENST00000482396 NRAPQ86VF7 1730 aa28.06■■■□□ 2.08
SFMBT1-204ENST00000482396 HAP1P54257 671 aaPredicted RBP28.06■■■□□ 2.08
SFMBT1-204ENST00000482396 NUTM2GQ5VZR2 741 aa28.06■■■□□ 2.08
SFMBT1-204ENST00000482396 TRPC5Q9UL62 973 aaPredicted RBP28.06■■■□□ 2.08
SFMBT1-204ENST00000482396 BRD4O60885 1362 aaPredicted RBP28.06■■■□□ 2.08
SFMBT1-204ENST00000482396 COL14A1Q05707 1796 aaKnown RBP28.06■■■□□ 2.08
SFMBT1-204ENST00000482396 PIK3C2AO00443 1686 aa28.05■■■□□ 2.08
SFMBT1-204ENST00000482396 USP47Q96K76 1375 aa28.05■■■□□ 2.08
SFMBT1-204ENST00000482396 CD163L1Q9NR16 1453 aa28.05■■■□□ 2.08
SFMBT1-204ENST00000482396 RGS12O14924 1447 aa28.04■■■□□ 2.08
SFMBT1-204ENST00000482396 UNC5CLQ8IV45 518 aa28.03■■■□□ 2.08
SFMBT1-204ENST00000482396 ABTB2Q8N961 1025 aa28.03■■■□□ 2.08
SFMBT1-204ENST00000482396 GLI3P10071 1580 aa28.03■■■□□ 2.08
SFMBT1-204ENST00000482396 USP19O94966 1318 aa28.02■■■□□ 2.08
SFMBT1-204ENST00000482396 PUS7Q96PZ0 661 aaKnown RBP28.01■■■□□ 2.07
SFMBT1-204ENST00000482396 ZNF692Q9BU19 519 aaPredicted RBP27.99■■■□□ 2.07
SFMBT1-204ENST00000482396 TTC21BQ7Z4L5 1316 aa27.97■■■□□ 2.07
SFMBT1-204ENST00000482396 GJD4Q96KN9 370 aaPredicted RBP27.97■■■□□ 2.07
SFMBT1-204ENST00000482396 SLC12A5Q9H2X9 1139 aa27.97■■■□□ 2.07
SFMBT1-204ENST00000482396 SLIT3O75094 1523 aa27.96■■■□□ 2.07
SFMBT1-204ENST00000482396 KIAA0232Q92628 1395 aa27.96■■■□□ 2.07
SFMBT1-204ENST00000482396 KTN1Q86UP2 1357 aaKnown RBP27.95■■■□□ 2.06
SFMBT1-204ENST00000482396 NLRP13Q86W25 1043 aa27.94■■■□□ 2.06
SFMBT1-204ENST00000482396 ZC3H6P61129 1189 aaKnown RBP27.93■■■□□ 2.06
SFMBT1-204ENST00000482396 VPS72Q15906 364 aa27.93■■■□□ 2.06
SFMBT1-204ENST00000482396 BTG4Q9NY30 223 aa27.93■■■□□ 2.06
SFMBT1-204ENST00000482396 LMO7Q8WWI1 1683 aa27.93■■■□□ 2.06
SFMBT1-204ENST00000482396 USP54Q70EL1 1684 aa27.91■■■□□ 2.06
SFMBT1-204ENST00000482396 BRWD3Q6RI45 1802 aa27.91■■■□□ 2.06
SFMBT1-204ENST00000482396 GCP02774 474 aa27.91■■■□□ 2.06
SFMBT1-204ENST00000482396 NLRP6P59044 892 aa27.91■■■□□ 2.06
SFMBT1-204ENST00000482396 CHRNA2Q15822 529 aa27.91■■■□□ 2.06
SFMBT1-204ENST00000482396 TMC1Q8TDI8 760 aa27.91■■■□□ 2.06
SFMBT1-204ENST00000482396 PRDM11Q9NQV5 511 aa27.91■■■□□ 2.06
SFMBT1-204ENST00000482396 CPDO75976 1380 aa27.9■■■□□ 2.06
SFMBT1-204ENST00000482396 SLC24A1O60721 1099 aa27.9■■■□□ 2.06
SFMBT1-204ENST00000482396 TTC21AQ8NDW8 1320 aa27.9■■■□□ 2.06
SFMBT1-204ENST00000482396 A0A1W2PP64 1363 aa27.89■■■□□ 2.06
SFMBT1-204ENST00000482396 COL18A1P39060 1754 aa27.88■■■□□ 2.05
SFMBT1-204ENST00000482396 CAMTA1Q9Y6Y1 1673 aa27.88■■■□□ 2.05
SFMBT1-204ENST00000482396 TMF1P82094 1093 aa27.87■■■□□ 2.05
SFMBT1-204ENST00000482396 MYOM1P52179 1685 aa27.85■■■□□ 2.05
SFMBT1-204ENST00000482396 ZRANB1Q9UGI0 708 aa27.85■■■□□ 2.05
SFMBT1-204ENST00000482396 NINLQ9Y2I6 1382 aa27.85■■■□□ 2.05
SFMBT1-204ENST00000482396 ONECUT3O60422 494 aaPredicted RBP27.84■■■□□ 2.05
SFMBT1-204ENST00000482396 USP31Q70CQ4 1352 aa27.84■■■□□ 2.05
SFMBT1-204ENST00000482396 EDC4Q6P2E9 1401 aaKnown RBP27.84■■■□□ 2.05
SFMBT1-204ENST00000482396 HDGFL2Q7Z4V5 671 aaPredicted RBP27.83■■■□□ 2.05
SFMBT1-204ENST00000482396 RGPD5Q99666 1765 aa27.83■■■□□ 2.05
SFMBT1-204ENST00000482396 NFAT5O94916 1531 aa27.82■■■□□ 2.04
SFMBT1-204ENST00000482396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.82■■■□□ 2.04
SFMBT1-204ENST00000482396 UPF1Q92900 1129 aaKnown RBP eCLIP27.82■■■□□ 2.04
SFMBT1-204ENST00000482396 TERF2IPQ9NYB0 399 aa27.82■■■□□ 2.04
SFMBT1-204ENST00000482396 NME9Q86XW9 330 aa27.81■■■□□ 2.04
SFMBT1-204ENST00000482396 SPATA31A5Q5VU36 1347 aa27.81■■■□□ 2.04
SFMBT1-204ENST00000482396 SPATA31A7Q8IWB4 1347 aa27.81■■■□□ 2.04
SFMBT1-204ENST00000482396 CCDC9Q9Y3X0 531 aaKnown RBP27.79■■■□□ 2.04
SFMBT1-204ENST00000482396 ANKRD36BQ8N2N9 1353 aa27.77■■■□□ 2.04
SFMBT1-204ENST00000482396 HSPA5P11021 654 aaKnown RBP27.77■■■□□ 2.04
SFMBT1-204ENST00000482396 THSD7AQ9UPZ6 1657 aa27.77■■■□□ 2.04
SFMBT1-204ENST00000482396 EP400Q96L91 3159 aa27.76■■■□□ 2.04
SFMBT1-204ENST00000482396 AATKQ6ZMQ8 1374 aa27.76■■■□□ 2.03
SFMBT1-204ENST00000482396 ARHGEF25Q86VW2 580 aa27.76■■■□□ 2.03
SFMBT1-204ENST00000482396 COL5A2P05997 1499 aaPredicted RBP27.76■■■□□ 2.03
SFMBT1-204ENST00000482396 SEPT12Q8IYM1 358 aa27.75■■■□□ 2.03
SFMBT1-204ENST00000482396 STRN4Q9NRL3 753 aa27.75■■■□□ 2.03
SFMBT1-204ENST00000482396 OVOS2A0A0J9YW53 1432 aa27.75■■■□□ 2.03
SFMBT1-204ENST00000482396 OVOS2Q6IE36 1432 aa27.75■■■□□ 2.03
SFMBT1-204ENST00000482396 SPATA31A1Q5TZJ5 1347 aa27.74■■■□□ 2.03
SFMBT1-204ENST00000482396 LTN1O94822 1766 aa27.74■■■□□ 2.03
SFMBT1-204ENST00000482396 EIF4G2P78344 907 aaKnown RBP eCLIP27.74■■■□□ 2.03
SFMBT1-204ENST00000482396 KCNH5Q8NCM2 988 aa27.74■■■□□ 2.03
SFMBT1-204ENST00000482396 FAM98CQ17RN3 349 aaKnown RBP27.73■■■□□ 2.03
SFMBT1-204ENST00000482396 CDCA8Q53HL2 280 aa27.73■■■□□ 2.03
SFMBT1-204ENST00000482396 AXIN2Q9Y2T1 843 aa27.73■■■□□ 2.03
SFMBT1-204ENST00000482396 LARP1Q6PKG0 1096 aaKnown RBP27.72■■■□□ 2.03
SFMBT1-204ENST00000482396 SOX12O15370 315 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms