RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 SSH1Q8WYL5 1049 aa13.98□□□□□ -0.17
DDX39B-219ENST00000481456 PANK2Q9BZ23 570 aa13.98□□□□□ -0.17
DDX39B-219ENST00000481456 SMC3Q9UQE7 1217 aa13.98□□□□□ -0.17
DDX39B-219ENST00000481456 PCDHB15Q9Y5E8 787 aa13.98□□□□□ -0.17
DDX39B-219ENST00000481456 HSP90B1P14625 803 aaKnown RBP13.98□□□□□ -0.17
DDX39B-219ENST00000481456 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.98□□□□□ -0.17
DDX39B-219ENST00000481456 FAM135AQ9P2D6 1515 aa13.98□□□□□ -0.17
DDX39B-219ENST00000481456 GOLGA6L19H0YKK7 550 aa13.97□□□□□ -0.17
DDX39B-219ENST00000481456 RUFY2Q8WXA3 655 aa13.97□□□□□ -0.17
DDX39B-219ENST00000481456 ABCC11Q96J66 1382 aa13.97□□□□□ -0.17
DDX39B-219ENST00000481456 ERC2O15083 957 aa13.97□□□□□ -0.17
DDX39B-219ENST00000481456 SEC24BO95487 1268 aa13.97□□□□□ -0.17
DDX39B-219ENST00000481456 HDAC1Q13547 482 aaPredicted RBP13.97□□□□□ -0.17
DDX39B-219ENST00000481456 ALDH1L2Q3SY69 923 aa13.97□□□□□ -0.17
DDX39B-219ENST00000481456 SSFA2P28290 1259 aa13.96□□□□□ -0.17
DDX39B-219ENST00000481456 SHANK2Q9UPX8 1470 aa13.96□□□□□ -0.17
DDX39B-219ENST00000481456 TRIM27P14373 513 aa13.96□□□□□ -0.17
DDX39B-219ENST00000481456 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.18
DDX39B-219ENST00000481456 ADGRL2O95490 1459 aa13.96□□□□□ -0.18
DDX39B-219ENST00000481456 RRAGDQ9NQL2 400 aaPredicted RBP13.95□□□□□ -0.18
DDX39B-219ENST00000481456 BMP2KLQ5H9B9 411 aa13.95□□□□□ -0.18
DDX39B-219ENST00000481456 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.95□□□□□ -0.18
DDX39B-219ENST00000481456 MAGI3Q5TCQ9 1506 aa13.95□□□□□ -0.18
DDX39B-219ENST00000481456 KDM5CP41229 1560 aa13.95□□□□□ -0.18
DDX39B-219ENST00000481456 KDM6BO15054 1643 aa13.94□□□□□ -0.18
DDX39B-219ENST00000481456 ZKSCAN1P17029 563 aaPredicted RBP13.94□□□□□ -0.18
DDX39B-219ENST00000481456 KLHL40Q2TBA0 621 aa13.94□□□□□ -0.18
DDX39B-219ENST00000481456 SNX21Q969T3 373 aa13.94□□□□□ -0.18
DDX39B-219ENST00000481456 KIF3AQ9Y496 699 aa13.94□□□□□ -0.18
DDX39B-219ENST00000481456 BECN2A8MW95 431 aa13.93□□□□□ -0.18
DDX39B-219ENST00000481456 ZNF592Q92610 1267 aa13.93□□□□□ -0.18
DDX39B-219ENST00000481456 TAOK2Q9UL54 1235 aa13.93□□□□□ -0.18
DDX39B-219ENST00000481456 H3BQV1 296 aa13.93□□□□□ -0.18
DDX39B-219ENST00000481456 IFFO2Q5TF58 517 aa13.93□□□□□ -0.18
DDX39B-219ENST00000481456 IFT57Q9NWB7 429 aa13.93□□□□□ -0.18
DDX39B-219ENST00000481456 SYCE3A1L190 88 aa13.92□□□□□ -0.18
DDX39B-219ENST00000481456 VPS37CA5D8V6 355 aaPredicted RBP13.92□□□□□ -0.18
DDX39B-219ENST00000481456 ZMYND15Q9H091 742 aa13.92□□□□□ -0.18
DDX39B-219ENST00000481456 WDR33Q9C0J8 1336 aaKnown RBP13.92□□□□□ -0.18
DDX39B-219ENST00000481456 KIAA0556O60303 1618 aa13.92□□□□□ -0.18
DDX39B-219ENST00000481456 NPHP1O15259 732 aa13.92□□□□□ -0.18
DDX39B-219ENST00000481456 FCHSD2O94868 740 aa13.92□□□□□ -0.18
DDX39B-219ENST00000481456 SASS6Q6UVJ0 657 aa13.92□□□□□ -0.18
DDX39B-219ENST00000481456 AMPHP49418 695 aa13.92□□□□□ -0.18
DDX39B-219ENST00000481456 POLR3AO14802 1390 aaPredicted RBP13.92□□□□□ -0.18
DDX39B-219ENST00000481456 BAG4O95429 457 aaKnown RBP13.92□□□□□ -0.18
DDX39B-219ENST00000481456 FKBP5Q13451 457 aaPredicted RBP13.92□□□□□ -0.18
DDX39B-219ENST00000481456 FAM184AQ8NB25 1140 aa13.92□□□□□ -0.18
DDX39B-219ENST00000481456 GNL2Q13823 731 aaKnown RBP13.91□□□□□ -0.18
DDX39B-219ENST00000481456 MCM5P33992 734 aa13.91□□□□□ -0.18
DDX39B-219ENST00000481456 NUCB1Q02818 461 aa13.91□□□□□ -0.18
DDX39B-219ENST00000481456 CCDC27Q2M243 656 aa13.91□□□□□ -0.18
DDX39B-219ENST00000481456 RPGRIP1LQ68CZ1 1315 aa13.91□□□□□ -0.18
DDX39B-219ENST00000481456 CHMP3Q9Y3E7 222 aa13.91□□□□□ -0.18
DDX39B-219ENST00000481456 TNNT3P45378 269 aaPredicted RBP13.9□□□□□ -0.18
DDX39B-219ENST00000481456 TBC1D9Q6ZT07 1266 aa13.9□□□□□ -0.18
DDX39B-219ENST00000481456 NSD2O96028 1365 aa13.9□□□□□ -0.18
DDX39B-219ENST00000481456 MLECQ14165 292 aa13.9□□□□□ -0.18
DDX39B-219ENST00000481456 RPAP2Q8IXW5 612 aaPredicted RBP13.9□□□□□ -0.18
DDX39B-219ENST00000481456 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.18
DDX39B-219ENST00000481456 TSPYL4Q9UJ04 414 aa13.9□□□□□ -0.18
DDX39B-219ENST00000481456 SMC5Q8IY18 1101 aa13.89□□□□□ -0.19
DDX39B-219ENST00000481456 BICD2Q8TD16 824 aa13.89□□□□□ -0.19
DDX39B-219ENST00000481456 ADGBQ8N7X0 1667 aa13.89□□□□□ -0.19
DDX39B-219ENST00000481456 GNAI3P08754 354 aa13.89□□□□□ -0.19
DDX39B-219ENST00000481456 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
DDX39B-219ENST00000481456 RAB3GAP1Q15042 981 aa13.89□□□□□ -0.19
DDX39B-219ENST00000481456 IL16Q14005 1332 aa13.89□□□□□ -0.19
DDX39B-219ENST00000481456 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
DDX39B-219ENST00000481456 ATAD2Q6PL18 1390 aa13.88□□□□□ -0.19
DDX39B-219ENST00000481456 ADAMTS12P58397 1594 aa13.88□□□□□ -0.19
DDX39B-219ENST00000481456 RLBP1P12271 317 aa13.88□□□□□ -0.19
DDX39B-219ENST00000481456 HSP90AB4PQ58FF6 505 aa13.88□□□□□ -0.19
DDX39B-219ENST00000481456 NFE2L2Q16236 605 aa13.88□□□□□ -0.19
DDX39B-219ENST00000481456 NPC1L1Q9UHC9 1359 aa13.87□□□□□ -0.19
DDX39B-219ENST00000481456 RNF20Q5VTR2 975 aa13.87□□□□□ -0.19
DDX39B-219ENST00000481456 ADGRF5Q8IZF2 1346 aa13.87□□□□□ -0.19
DDX39B-219ENST00000481456 GNAI2P04899 355 aa13.87□□□□□ -0.19
DDX39B-219ENST00000481456 ZSCAN23Q3MJ62 389 aa13.87□□□□□ -0.19
DDX39B-219ENST00000481456 CHMP4CQ96CF2 233 aa13.87□□□□□ -0.19
DDX39B-219ENST00000481456 CNTROBQ8N137 903 aa13.87□□□□□ -0.19
DDX39B-219ENST00000481456 FIBPO43427 364 aa13.86□□□□□ -0.19
DDX39B-219ENST00000481456 SF3A1Q15459 793 aaKnown RBP13.86□□□□□ -0.19
DDX39B-219ENST00000481456 IFIT2P09913 472 aaKnown RBP13.86□□□□□ -0.19
DDX39B-219ENST00000481456 A2MP01023 1474 aa13.86□□□□□ -0.19
DDX39B-219ENST00000481456 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
DDX39B-219ENST00000481456 PRAM1Q96QH2 718 aa13.86□□□□□ -0.19
DDX39B-219ENST00000481456 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
DDX39B-219ENST00000481456 TNNQ9UQP3 1299 aa13.86□□□□□ -0.19
DDX39B-219ENST00000481456 DUOX2Q9NRD8 1548 aa13.85□□□□□ -0.19
DDX39B-219ENST00000481456 DYNC1I1O14576 645 aa13.85□□□□□ -0.19
DDX39B-219ENST00000481456 CCDC192P0DO97 292 aa13.85□□□□□ -0.19
DDX39B-219ENST00000481456 ZMYM3Q14202 1370 aa13.85□□□□□ -0.19
DDX39B-219ENST00000481456 UBTFL1P0CB47 393 aaPredicted RBP13.85□□□□□ -0.19
DDX39B-219ENST00000481456 TPD52L1Q16890 204 aaPredicted RBP13.85□□□□□ -0.19
DDX39B-219ENST00000481456 NECTIN2Q92692 538 aa13.84□□□□□ -0.19
DDX39B-219ENST00000481456 TRIM5Q9C035 493 aa13.84□□□□□ -0.19
DDX39B-219ENST00000481456 NGDNQ8NEJ9 315 aaKnown RBP13.84□□□□□ -0.19
DDX39B-219ENST00000481456 HS1BP3Q53T59 392 aa13.84□□□□□ -0.19
DDX39B-219ENST00000481456 MPNDQ8N594 471 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms