RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 FAM83GA6ND36 823 aa11.58□□□□□ -0.56
CTPS1-209ENST00000480420 BTG4Q9NY30 223 aa11.58□□□□□ -0.56
CTPS1-209ENST00000480420 TRPM3Q9HCF6 1732 aaPredicted RBP11.57□□□□□ -0.56
CTPS1-209ENST00000480420 CABP2Q9NPB3 220 aa11.57□□□□□ -0.56
CTPS1-209ENST00000480420 BRWD3Q6RI45 1802 aa11.57□□□□□ -0.56
CTPS1-209ENST00000480420 CENPJQ9HC77 1338 aaPredicted RBP11.57□□□□□ -0.56
CTPS1-209ENST00000480420 RALGAPBQ86X10 1494 aa11.57□□□□□ -0.56
CTPS1-209ENST00000480420 QRICH2Q9H0J4 1663 aa11.56□□□□□ -0.56
CTPS1-209ENST00000480420 ZC3H6P61129 1189 aaKnown RBP11.56□□□□□ -0.56
CTPS1-209ENST00000480420 SEPT12Q8IYM1 358 aa11.56□□□□□ -0.56
CTPS1-209ENST00000480420 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.56□□□□□ -0.56
CTPS1-209ENST00000480420 PRDM11Q9NQV5 511 aa11.56□□□□□ -0.56
CTPS1-209ENST00000480420 ACEP12821 1306 aa11.56□□□□□ -0.56
CTPS1-209ENST00000480420 SLIT2O94813 1529 aa11.55□□□□□ -0.56
CTPS1-209ENST00000480420 CHRNA2Q15822 529 aa11.55□□□□□ -0.56
CTPS1-209ENST00000480420 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
CTPS1-209ENST00000480420 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
CTPS1-209ENST00000480420 LRP5O75197 1615 aa11.55□□□□□ -0.56
CTPS1-209ENST00000480420 ALS2Q96Q42 1657 aa11.55□□□□□ -0.56
CTPS1-209ENST00000480420 NWD2Q9ULI1 1742 aa11.55□□□□□ -0.56
CTPS1-209ENST00000480420 GLI3P10071 1580 aa11.54□□□□□ -0.56
CTPS1-209ENST00000480420 SF3B2Q13435 895 aaKnown RBP11.54□□□□□ -0.56
CTPS1-209ENST00000480420 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
CTPS1-209ENST00000480420 NBPF8Q3BBV2 869 aa11.54□□□□□ -0.56
CTPS1-209ENST00000480420 ABTB2Q8N961 1025 aa11.54□□□□□ -0.56
CTPS1-209ENST00000480420 USP35Q9P2H5 1018 aa11.54□□□□□ -0.56
CTPS1-209ENST00000480420 ATP7BP35670 1465 aa11.54□□□□□ -0.56
CTPS1-209ENST00000480420 ROCK2O75116 1388 aaKnown RBP11.54□□□□□ -0.56
CTPS1-209ENST00000480420 EVA1CP58658 441 aa11.53□□□□□ -0.56
CTPS1-209ENST00000480420 VPS72Q15906 364 aa11.53□□□□□ -0.56
CTPS1-209ENST00000480420 COL14A1Q05707 1796 aaKnown RBP11.53□□□□□ -0.56
CTPS1-209ENST00000480420 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.56
CTPS1-209ENST00000480420 CCDC125Q86Z20 511 aa11.52□□□□□ -0.57
CTPS1-209ENST00000480420 TRPM1Q7Z4N2 1603 aa11.52□□□□□ -0.57
CTPS1-209ENST00000480420 FAM182BQ5T319 152 aa11.51□□□□□ -0.57
CTPS1-209ENST00000480420 KRT27Q7Z3Y8 459 aa11.51□□□□□ -0.57
CTPS1-209ENST00000480420 CABP1Q9NZU7 370 aa11.51□□□□□ -0.57
CTPS1-209ENST00000480420 TOPAZ1Q8N9V7 1692 aa11.51□□□□□ -0.57
CTPS1-209ENST00000480420 KIAA0232Q92628 1395 aa11.51□□□□□ -0.57
CTPS1-209ENST00000480420 SOX12O15370 315 aa11.5□□□□□ -0.57
CTPS1-209ENST00000480420 EVC2Q86UK5 1308 aa11.5□□□□□ -0.57
CTPS1-209ENST00000480420 TONSLQ96HA7 1378 aa11.5□□□□□ -0.57
CTPS1-209ENST00000480420 BLMP54132 1417 aaPredicted RBP11.5□□□□□ -0.57
CTPS1-209ENST00000480420 PHRF1Q9P1Y6 1649 aaKnown RBP11.49□□□□□ -0.57
CTPS1-209ENST00000480420 NRAPQ86VF7 1730 aa11.49□□□□□ -0.57
CTPS1-209ENST00000480420 PLEKHG3A1L390 1219 aa11.49□□□□□ -0.57
CTPS1-209ENST00000480420 CRYBG1Q9Y4K1 1723 aa11.49□□□□□ -0.57
CTPS1-209ENST00000480420 NLRP6P59044 892 aa11.48□□□□□ -0.57
CTPS1-209ENST00000480420 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
CTPS1-209ENST00000480420 DEFB132Q7Z7B7 95 aa11.48□□□□□ -0.57
CTPS1-209ENST00000480420 NLRP13Q86W25 1043 aa11.48□□□□□ -0.57
CTPS1-209ENST00000480420 CARD11Q9BXL7 1154 aa11.48□□□□□ -0.57
CTPS1-209ENST00000480420 POLR3AO14802 1390 aaPredicted RBP11.47□□□□□ -0.57
CTPS1-209ENST00000480420 TMC1Q8TDI8 760 aa11.46□□□□□ -0.57
CTPS1-209ENST00000480420 SPATA31A5Q5VU36 1347 aa11.45□□□□□ -0.58
CTPS1-209ENST00000480420 SPATA31A7Q8IWB4 1347 aa11.45□□□□□ -0.58
CTPS1-209ENST00000480420 GCP02774 474 aa11.44□□□□□ -0.58
CTPS1-209ENST00000480420 LARP1Q6PKG0 1096 aaKnown RBP11.44□□□□□ -0.58
CTPS1-209ENST00000480420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.58
CTPS1-209ENST00000480420 ONECUT3O60422 494 aaPredicted RBP11.43□□□□□ -0.58
CTPS1-209ENST00000480420 PDE3BQ13370 1112 aa11.43□□□□□ -0.58
CTPS1-209ENST00000480420 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
CTPS1-209ENST00000480420 NRKQ7Z2Y5 1582 aa11.42□□□□□ -0.58
CTPS1-209ENST00000480420 SPATA31A1Q5TZJ5 1347 aa11.42□□□□□ -0.58
CTPS1-209ENST00000480420 CSB-PGBD3P0DP91 1061 aa11.42□□□□□ -0.58
CTPS1-209ENST00000480420 BAG6P46379 1132 aa11.42□□□□□ -0.58
CTPS1-209ENST00000480420 USP6P35125 1406 aa11.42□□□□□ -0.58
CTPS1-209ENST00000480420 KTN1Q86UP2 1357 aaKnown RBP11.41□□□□□ -0.58
CTPS1-209ENST00000480420 TOM1L2Q6ZVM7 507 aa11.41□□□□□ -0.58
CTPS1-209ENST00000480420 SSH2Q76I76 1423 aa11.41□□□□□ -0.58
CTPS1-209ENST00000480420 AKAP12Q02952 1782 aa11.41□□□□□ -0.58
CTPS1-209ENST00000480420 RGPD5Q99666 1765 aa11.41□□□□□ -0.58
CTPS1-209ENST00000480420 CAMTA1Q9Y6Y1 1673 aa11.4□□□□□ -0.58
CTPS1-209ENST00000480420 PSDA5PKW4 1024 aaPredicted RBP11.4□□□□□ -0.58
CTPS1-209ENST00000480420 TRIM37O94972 964 aa11.4□□□□□ -0.58
CTPS1-209ENST00000480420 EN1Q05925 392 aaPredicted RBP11.4□□□□□ -0.58
CTPS1-209ENST00000480420 TCP11L2Q8N4U5 519 aa11.4□□□□□ -0.58
CTPS1-209ENST00000480420 ZNF692Q9BU19 519 aaPredicted RBP11.4□□□□□ -0.58
CTPS1-209ENST00000480420 PIK3C2AO00443 1686 aa11.4□□□□□ -0.59
CTPS1-209ENST00000480420 USP19O94966 1318 aa11.39□□□□□ -0.59
CTPS1-209ENST00000480420 TTC21BQ7Z4L5 1316 aa11.39□□□□□ -0.59
CTPS1-209ENST00000480420 RGPD1P0DJD0 1748 aa11.39□□□□□ -0.59
CTPS1-209ENST00000480420 HDGFL2Q7Z4V5 671 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-209ENST00000480420 FAM196AQ6ZSG2 479 aa11.38□□□□□ -0.59
CTPS1-209ENST00000480420 POTEDQ86YR6 584 aa11.38□□□□□ -0.59
CTPS1-209ENST00000480420 THSD7AQ9UPZ6 1657 aa11.37□□□□□ -0.59
CTPS1-209ENST00000480420 APBA3O96018 575 aa11.37□□□□□ -0.59
CTPS1-209ENST00000480420 SLC12A5Q9H2X9 1139 aa11.37□□□□□ -0.59
CTPS1-209ENST00000480420 BRD4O60885 1362 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-209ENST00000480420 CPDO75976 1380 aa11.37□□□□□ -0.59
CTPS1-209ENST00000480420 KAT6BQ8WYB5 2073 aa11.36□□□□□ -0.59
CTPS1-209ENST00000480420 TNS1Q9HBL0 1735 aaKnown RBP11.36□□□□□ -0.59
CTPS1-209ENST00000480420 ST20-MTHFSA0A0A6YYL1 179 aa11.36□□□□□ -0.59
CTPS1-209ENST00000480420 NME9Q86XW9 330 aa11.36□□□□□ -0.59
CTPS1-209ENST00000480420 KCNH5Q8NCM2 988 aa11.36□□□□□ -0.59
CTPS1-209ENST00000480420 COL5A2P05997 1499 aaPredicted RBP11.36□□□□□ -0.59
CTPS1-209ENST00000480420 LMO7Q8WWI1 1683 aa11.36□□□□□ -0.59
CTPS1-209ENST00000480420 TTC21AQ8NDW8 1320 aa11.35□□□□□ -0.59
CTPS1-209ENST00000480420 EZH2Q15910 746 aaKnown RBP11.35□□□□□ -0.59
CTPS1-209ENST00000480420 BARGINQ6ZT62 677 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms